RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 TSC1Q92574 1164 aa10.41□□□□□ -0.74
EPHA4-205ENST00000419964 GPATCH8Q9UKJ3 1502 aaKnown RBP10.41□□□□□ -0.74
EPHA4-205ENST00000419964 CFAP99D6REC4 459 aa10.4□□□□□ -0.74
EPHA4-205ENST00000419964 APBB1O00213 710 aa10.4□□□□□ -0.74
EPHA4-205ENST00000419964 COPS2P61201 443 aa10.4□□□□□ -0.74
EPHA4-205ENST00000419964 SPNS2Q8IVW8 549 aa10.4□□□□□ -0.74
EPHA4-205ENST00000419964 USB1Q9BQ65 265 aaKnown RBP10.4□□□□□ -0.74
EPHA4-205ENST00000419964 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 ABCC10Q5T3U5 1492 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 SHANK2Q9UPX8 1470 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 ARID3CA6NKF2 412 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 THAP11Q96EK4 314 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 ZMYND15Q9H091 742 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 SNRKQ9NRH2 765 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
EPHA4-205ENST00000419964 MAPKBP1O60336 1514 aa10.38□□□□□ -0.75
EPHA4-205ENST00000419964 SOCS7O14512 581 aa10.38□□□□□ -0.75
EPHA4-205ENST00000419964 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
EPHA4-205ENST00000419964 DESI1Q6ICB0 168 aa10.38□□□□□ -0.75
EPHA4-205ENST00000419964 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
EPHA4-205ENST00000419964 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
EPHA4-205ENST00000419964 ADGBQ8N7X0 1667 aa10.38□□□□□ -0.75
EPHA4-205ENST00000419964 ADGRL2O95490 1459 aa10.37□□□□□ -0.75
EPHA4-205ENST00000419964 MTRQ99707 1265 aa10.37□□□□□ -0.75
EPHA4-205ENST00000419964 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 ABCC5O15440 1437 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 RAD21O60216 631 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 ZPR1O75312 459 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 SPSB2Q99619 263 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 PRM3Q9NNZ6 103 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 CROCC2H7BZ55 1655 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 KDM5BQ9UGL1 1544 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 ANKRD30AQ9BXX3 1397 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 CDC42BPAQ5VT25 1732 aa10.36□□□□□ -0.75
EPHA4-205ENST00000419964 ARHGEF5Q12774 1597 aa10.35□□□□□ -0.75
EPHA4-205ENST00000419964 PREX2Q70Z35 1606 aa10.35□□□□□ -0.75
EPHA4-205ENST00000419964 TSPY4P0CV99 314 aa10.34□□□□□ -0.75
EPHA4-205ENST00000419964 TSPY10P0CW01 314 aa10.34□□□□□ -0.75
EPHA4-205ENST00000419964 TJAP1Q5JTD0 557 aa10.34□□□□□ -0.75
EPHA4-205ENST00000419964 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
EPHA4-205ENST00000419964 MSS51Q4VC12 460 aa10.33□□□□□ -0.76
EPHA4-205ENST00000419964 A6NJR5 290 aa10.32□□□□□ -0.76
EPHA4-205ENST00000419964 ADH1BP00325 375 aa10.32□□□□□ -0.76
EPHA4-205ENST00000419964 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
EPHA4-205ENST00000419964 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
EPHA4-205ENST00000419964 ZCCHC11Q5TAX3 1644 aaKnown RBP10.32□□□□□ -0.76
EPHA4-205ENST00000419964 ARAP3Q8WWN8 1544 aa10.32□□□□□ -0.76
EPHA4-205ENST00000419964 NCOA1Q15788 1441 aa10.32□□□□□ -0.76
EPHA4-205ENST00000419964 TONSLQ96HA7 1378 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 MYO5CQ9NQX4 1742 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 JUNDP17535 347 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 LYPD8Q6UX82 237 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 CLUAP1Q96AJ1 413 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 RRP7BPQ9NSQ0 103 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 KIAA1107Q9UPP5 1409 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 ERCC6L2Q5T890 1561 aa10.31□□□□□ -0.76
EPHA4-205ENST00000419964 CCDC141Q6ZP82 1450 aa10.3□□□□□ -0.76
EPHA4-205ENST00000419964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.3□□□□□ -0.76
EPHA4-205ENST00000419964 FAM160A2Q8N612 972 aaPredicted RBP10.3□□□□□ -0.76
EPHA4-205ENST00000419964 LRRN4Q8WUT4 740 aa10.3□□□□□ -0.76
EPHA4-205ENST00000419964 ZNF516Q92618 1163 aa10.3□□□□□ -0.76
EPHA4-205ENST00000419964 TRIM52Q96A61 297 aa10.3□□□□□ -0.76
EPHA4-205ENST00000419964 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
EPHA4-205ENST00000419964 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
EPHA4-205ENST00000419964 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
EPHA4-205ENST00000419964 TLL1O43897 1013 aa10.29□□□□□ -0.76
EPHA4-205ENST00000419964 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
EPHA4-205ENST00000419964 C9orf84Q5VXU9 1444 aa10.29□□□□□ -0.76
EPHA4-205ENST00000419964 ZNF644Q9H582 1327 aaPredicted RBP10.29□□□□□ -0.76
EPHA4-205ENST00000419964 CDC42BPBQ9Y5S2 1711 aa10.28□□□□□ -0.76
EPHA4-205ENST00000419964 MAST1Q9Y2H9 1570 aa10.28□□□□□ -0.76
EPHA4-205ENST00000419964 PLCH2O75038 1416 aa10.28□□□□□ -0.76
EPHA4-205ENST00000419964 PTPRNQ16849 979 aa10.28□□□□□ -0.76
EPHA4-205ENST00000419964 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
EPHA4-205ENST00000419964 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
EPHA4-205ENST00000419964 MMP16P51512 607 aa10.27□□□□□ -0.77
EPHA4-205ENST00000419964 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.77
EPHA4-205ENST00000419964 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
EPHA4-205ENST00000419964 POM121Q96HA1 1249 aa10.27□□□□□ -0.77
EPHA4-205ENST00000419964 GJD4Q96KN9 370 aaPredicted RBP10.27□□□□□ -0.77
EPHA4-205ENST00000419964 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.77
EPHA4-205ENST00000419964 TTC37Q6PGP7 1564 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 ANKRD50Q9ULJ7 1429 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 MBD5Q9P267 1494 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 WDR7Q9Y4E6 1490 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 KCNC4Q03721 635 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 PROSER2Q86WR7 435 aaPredicted RBP10.26□□□□□ -0.77
EPHA4-205ENST00000419964 PNMA1Q8ND90 353 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 MPHOSPH9Q99550 1183 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 SLC6A16Q9GZN6 736 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 GDPD2Q9HCC8 539 aa10.26□□□□□ -0.77
EPHA4-205ENST00000419964 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
EPHA4-205ENST00000419964 TRIM34Q9BYJ4 488 aa10.25□□□□□ -0.77
EPHA4-205ENST00000419964 PLXNC1O60486 1568 aa10.24□□□□□ -0.77
EPHA4-205ENST00000419964 PPP1R15AO75807 674 aaPredicted RBP10.24□□□□□ -0.77
EPHA4-205ENST00000419964 ITGBL1O95965 494 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms