RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 NUDT16Q96DE0 195 aaKnown RBP17.85■□□□□ 0.45
DDX39B-204ENST00000418897 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
DDX39B-204ENST00000418897 CPDO75976 1380 aa17.84■□□□□ 0.45
DDX39B-204ENST00000418897 COL13A1Q5TAT6 717 aaPredicted RBP17.84■□□□□ 0.45
DDX39B-204ENST00000418897 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
DDX39B-204ENST00000418897 ATP7BP35670 1465 aa17.83■□□□□ 0.45
DDX39B-204ENST00000418897 MPHOSPH9Q99550 1183 aa17.83■□□□□ 0.44
DDX39B-204ENST00000418897 CDCA7Q9BWT1 371 aaPredicted RBP17.83■□□□□ 0.44
DDX39B-204ENST00000418897 CRB1P82279 1406 aa17.82■□□□□ 0.44
DDX39B-204ENST00000418897 YBX3P16989 372 aaKnown RBP eCLIP17.82■□□□□ 0.44
DDX39B-204ENST00000418897 TNS4Q8IZW8 715 aa17.82■□□□□ 0.44
DDX39B-204ENST00000418897 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
DDX39B-204ENST00000418897 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
DDX39B-204ENST00000418897 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
DDX39B-204ENST00000418897 BCL9O00512 1426 aa17.81■□□□□ 0.44
DDX39B-204ENST00000418897 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
DDX39B-204ENST00000418897 GCP02774 474 aa17.81■□□□□ 0.44
DDX39B-204ENST00000418897 DNAJC5GQ8N7S2 189 aa17.81■□□□□ 0.44
DDX39B-204ENST00000418897 USP19O94966 1318 aa17.8■□□□□ 0.44
DDX39B-204ENST00000418897 ACEP12821 1306 aa17.8■□□□□ 0.44
DDX39B-204ENST00000418897 ADGRB1O14514 1584 aa17.8■□□□□ 0.44
DDX39B-204ENST00000418897 TOM1L2Q6ZVM7 507 aa17.8■□□□□ 0.44
DDX39B-204ENST00000418897 SLC34A2O95436 690 aa17.78■□□□□ 0.44
DDX39B-204ENST00000418897 EXOC5O00471 708 aa17.77■□□□□ 0.44
DDX39B-204ENST00000418897 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
DDX39B-204ENST00000418897 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.43
DDX39B-204ENST00000418897 LRRC37A3O60309 1634 aa17.76■□□□□ 0.43
DDX39B-204ENST00000418897 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
DDX39B-204ENST00000418897 CDK19Q9BWU1 502 aa17.76■□□□□ 0.43
DDX39B-204ENST00000418897 PLEKHG3A1L390 1219 aa17.75■□□□□ 0.43
DDX39B-204ENST00000418897 ZNF827Q17R98 1081 aa17.74■□□□□ 0.43
DDX39B-204ENST00000418897 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
DDX39B-204ENST00000418897 KIF3CO14782 793 aa17.72■□□□□ 0.43
DDX39B-204ENST00000418897 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
DDX39B-204ENST00000418897 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
DDX39B-204ENST00000418897 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
DDX39B-204ENST00000418897 ADCY9O60503 1353 aa17.69■□□□□ 0.42
DDX39B-204ENST00000418897 TOMM70O94826 608 aa17.69■□□□□ 0.42
DDX39B-204ENST00000418897 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
DDX39B-204ENST00000418897 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
DDX39B-204ENST00000418897 PCDH10Q9P2E7 1040 aa17.69■□□□□ 0.42
DDX39B-204ENST00000418897 ITSN1Q15811 1721 aa17.68■□□□□ 0.42
DDX39B-204ENST00000418897 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
DDX39B-204ENST00000418897 WDR17Q8IZU2 1322 aa17.68■□□□□ 0.42
DDX39B-204ENST00000418897 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
DDX39B-204ENST00000418897 KLRG1Q96E93 195 aa17.67■□□□□ 0.42
DDX39B-204ENST00000418897 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
DDX39B-204ENST00000418897 PNPLA7Q6ZV29 1317 aa17.66■□□□□ 0.42
DDX39B-204ENST00000418897 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
DDX39B-204ENST00000418897 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
DDX39B-204ENST00000418897 NLRP6P59044 892 aa17.65■□□□□ 0.42
DDX39B-204ENST00000418897 SLC27A3Q5K4L6 730 aa17.65■□□□□ 0.42
DDX39B-204ENST00000418897 COL18A1P39060 1754 aa17.65■□□□□ 0.42
DDX39B-204ENST00000418897 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
DDX39B-204ENST00000418897 CD2APQ9Y5K6 639 aa17.64■□□□□ 0.41
DDX39B-204ENST00000418897 AKAP12Q02952 1782 aa17.63■□□□□ 0.41
DDX39B-204ENST00000418897 MSH5O43196 834 aa17.63■□□□□ 0.41
DDX39B-204ENST00000418897 WWC3Q9ULE0 1092 aa17.63■□□□□ 0.41
DDX39B-204ENST00000418897 TOPAZ1Q8N9V7 1692 aa17.62■□□□□ 0.41
DDX39B-204ENST00000418897 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
DDX39B-204ENST00000418897 USP6P35125 1406 aa17.62■□□□□ 0.41
DDX39B-204ENST00000418897 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
DDX39B-204ENST00000418897 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
DDX39B-204ENST00000418897 COL24A1Q17RW2 1714 aa17.59■□□□□ 0.41
DDX39B-204ENST00000418897 ARHGEF28Q8N1W1 1705 aaKnown RBP17.58■□□□□ 0.41
DDX39B-204ENST00000418897 SLIT3O75094 1523 aa17.58■□□□□ 0.41
DDX39B-204ENST00000418897 KCNQ4P56696 695 aa17.58■□□□□ 0.4
DDX39B-204ENST00000418897 CABP2Q9NPB3 220 aa17.57■□□□□ 0.4
DDX39B-204ENST00000418897 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
DDX39B-204ENST00000418897 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
DDX39B-204ENST00000418897 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
DDX39B-204ENST00000418897 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
DDX39B-204ENST00000418897 HTRA3P83110 453 aa17.55■□□□□ 0.4
DDX39B-204ENST00000418897 C16orf71Q8IYS4 520 aaPredicted RBP17.55■□□□□ 0.4
DDX39B-204ENST00000418897 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
DDX39B-204ENST00000418897 CABP1Q9NZU7 370 aa17.55■□□□□ 0.4
DDX39B-204ENST00000418897 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
DDX39B-204ENST00000418897 TNS2Q63HR2 1409 aa17.54■□□□□ 0.4
DDX39B-204ENST00000418897 BTAF1O14981 1849 aa17.54■□□□□ 0.4
DDX39B-204ENST00000418897 SOX12O15370 315 aa17.53■□□□□ 0.4
DDX39B-204ENST00000418897 SRPK2P78362 688 aaKnown RBP17.53■□□□□ 0.4
DDX39B-204ENST00000418897 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
DDX39B-204ENST00000418897 FSTL1Q12841 308 aa17.52■□□□□ 0.4
DDX39B-204ENST00000418897 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.4
DDX39B-204ENST00000418897 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.39
DDX39B-204ENST00000418897 KCNH5Q8NCM2 988 aa17.51■□□□□ 0.39
DDX39B-204ENST00000418897 PCNTO95613 3336 aa17.51■□□□□ 0.39
DDX39B-204ENST00000418897 IGSF1Q8N6C5 1336 aa17.49■□□□□ 0.39
DDX39B-204ENST00000418897 IL2RBP14784 551 aa17.49■□□□□ 0.39
DDX39B-204ENST00000418897 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
DDX39B-204ENST00000418897 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
DDX39B-204ENST00000418897 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
DDX39B-204ENST00000418897 HSPA1AP0DMV8 641 aaKnown RBP17.48■□□□□ 0.39
DDX39B-204ENST00000418897 HSPA1BP0DMV9 641 aaKnown RBP17.48■□□□□ 0.39
DDX39B-204ENST00000418897 NMRK2Q9NPI5 230 aa17.48■□□□□ 0.39
DDX39B-204ENST00000418897 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
DDX39B-204ENST00000418897 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
DDX39B-204ENST00000418897 HMGB2P26583 209 aaKnown RBP17.47■□□□□ 0.39
DDX39B-204ENST00000418897 NBPF1Q3BBV0 1214 aa17.47■□□□□ 0.39
DDX39B-204ENST00000418897 FLAD1Q8NFF5 587 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms