RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 EIF4G2P78344 907 aaKnown RBP eCLIP28.84■■■□□ 2.21
PKNOX1-202ENST00000418336 BARGINQ6ZT62 677 aa28.84■■■□□ 2.21
PKNOX1-202ENST00000418336 CRB1P82279 1406 aa28.84■■■□□ 2.21
PKNOX1-202ENST00000418336 CARD14Q9BXL6 1004 aa28.83■■■□□ 2.21
PKNOX1-202ENST00000418336 EVA1CP58658 441 aa28.82■■■□□ 2.2
PKNOX1-202ENST00000418336 KRT27Q7Z3Y8 459 aa28.82■■■□□ 2.2
PKNOX1-202ENST00000418336 ZBTB7CA1YPR0 619 aa28.8■■■□□ 2.2
PKNOX1-202ENST00000418336 WDR17Q8IZU2 1322 aa28.79■■■□□ 2.2
PKNOX1-202ENST00000418336 FYB1O15117 783 aa28.79■■■□□ 2.2
PKNOX1-202ENST00000418336 PARP4Q9UKK3 1724 aaKnown RBP28.79■■■□□ 2.2
PKNOX1-202ENST00000418336 WNK3Q9BYP7 1800 aa28.78■■■□□ 2.2
PKNOX1-202ENST00000418336 C11orf95C9JLR9 678 aaPredicted RBP28.78■■■□□ 2.2
PKNOX1-202ENST00000418336 TCP11L2Q8N4U5 519 aa28.78■■■□□ 2.2
PKNOX1-202ENST00000418336 USP35Q9P2H5 1018 aa28.77■■■□□ 2.2
PKNOX1-202ENST00000418336 THRAP3Q9Y2W1 955 aaKnown RBP28.77■■■□□ 2.2
PKNOX1-202ENST00000418336 KIF20BQ96Q89 1820 aa28.76■■■□□ 2.19
PKNOX1-202ENST00000418336 BLMP54132 1417 aaPredicted RBP28.75■■■□□ 2.19
PKNOX1-202ENST00000418336 DISP2A7MBM2 1401 aa28.73■■■□□ 2.19
PKNOX1-202ENST00000418336 FBLN1P23142 703 aa28.73■■■□□ 2.19
PKNOX1-202ENST00000418336 LRRC37A3O60309 1634 aa28.72■■■□□ 2.19
PKNOX1-202ENST00000418336 NSD3Q9BZ95 1437 aa28.72■■■□□ 2.19
PKNOX1-202ENST00000418336 FAM182BQ5T319 152 aa28.72■■■□□ 2.19
PKNOX1-202ENST00000418336 CCDC125Q86Z20 511 aa28.72■■■□□ 2.19
PKNOX1-202ENST00000418336 ERBB3P21860 1342 aa28.71■■■□□ 2.19
PKNOX1-202ENST00000418336 A0A0G2JS52 829 aa28.71■■■□□ 2.19
PKNOX1-202ENST00000418336 MYT1Q01538 1121 aa28.71■■■□□ 2.19
PKNOX1-202ENST00000418336 COG3Q96JB2 828 aa28.71■■■□□ 2.19
PKNOX1-202ENST00000418336 GGNBP2Q9H3C7 697 aa28.7■■■□□ 2.18
PKNOX1-202ENST00000418336 CARD10Q9BWT7 1032 aa28.69■■■□□ 2.18
PKNOX1-202ENST00000418336 PEAK1Q9H792 1746 aa28.69■■■□□ 2.18
PKNOX1-202ENST00000418336 MAP3K19Q56UN5 1328 aa28.69■■■□□ 2.18
PKNOX1-202ENST00000418336 TOM1L2Q6ZVM7 507 aa28.68■■■□□ 2.18
PKNOX1-202ENST00000418336 TNS1Q9HBL0 1735 aaKnown RBP28.66■■■□□ 2.18
PKNOX1-202ENST00000418336 IP6K1Q92551 441 aa28.66■■■□□ 2.18
PKNOX1-202ENST00000418336 RGPD1P0DJD0 1748 aa28.63■■■□□ 2.17
PKNOX1-202ENST00000418336 ANKRD24Q8TF21 1146 aa28.63■■■□□ 2.17
PKNOX1-202ENST00000418336 CCDC7Q96M83 1385 aa28.62■■■□□ 2.17
PKNOX1-202ENST00000418336 HOXC9P31274 260 aa28.61■■■□□ 2.17
PKNOX1-202ENST00000418336 RTL1A6NKG5 1358 aa28.61■■■□□ 2.17
PKNOX1-202ENST00000418336 DEFB132Q7Z7B7 95 aa28.6■■■□□ 2.17
PKNOX1-202ENST00000418336 FAM208AQ9UK61 1670 aaKnown RBP28.6■■■□□ 2.17
PKNOX1-202ENST00000418336 CSB-PGBD3P0DP91 1061 aa28.59■■■□□ 2.17
PKNOX1-202ENST00000418336 RRS1Q15050 365 aaKnown RBP28.59■■■□□ 2.17
PKNOX1-202ENST00000418336 ANKRD26Q9UPS8 1709 aa28.59■■■□□ 2.17
PKNOX1-202ENST00000418336 KIF7Q2M1P5 1343 aa28.59■■■□□ 2.17
PKNOX1-202ENST00000418336 FAM196AQ6ZSG2 479 aa28.57■■■□□ 2.16
PKNOX1-202ENST00000418336 PANK3Q9H999 370 aa28.57■■■□□ 2.16
PKNOX1-202ENST00000418336 RGPD2P0DJD1 1756 aa28.56■■■□□ 2.16
PKNOX1-202ENST00000418336 PDE3BQ13370 1112 aa28.56■■■□□ 2.16
PKNOX1-202ENST00000418336 POLR3GLQ9BT43 218 aa28.56■■■□□ 2.16
PKNOX1-202ENST00000418336 CDCA7Q9BWT1 371 aaPredicted RBP28.56■■■□□ 2.16
PKNOX1-202ENST00000418336 BCL9O00512 1426 aa28.54■■■□□ 2.16
PKNOX1-202ENST00000418336 CGNL1Q0VF96 1302 aa28.54■■■□□ 2.16
PKNOX1-202ENST00000418336 MARCH10Q8NA82 808 aaPredicted RBP28.54■■■□□ 2.16
PKNOX1-202ENST00000418336 SBF2Q86WG5 1849 aa28.54■■■□□ 2.16
PKNOX1-202ENST00000418336 DDB1Q16531 1140 aa28.53■■■□□ 2.16
PKNOX1-202ENST00000418336 TNS2Q63HR2 1409 aa28.52■■■□□ 2.16
PKNOX1-202ENST00000418336 KIF24Q5T7B8 1368 aa28.52■■■□□ 2.16
PKNOX1-202ENST00000418336 NLRP2Q9NX02 1062 aa28.52■■■□□ 2.16
PKNOX1-202ENST00000418336 OVOS2A0A0G2JMS6 1433 aa28.52■■■□□ 2.16
PKNOX1-202ENST00000418336 AMPHP49418 695 aa28.51■■■□□ 2.15
PKNOX1-202ENST00000418336 INSRP06213 1382 aa28.5■■■□□ 2.15
PKNOX1-202ENST00000418336 TRIM37O94972 964 aa28.49■■■□□ 2.15
PKNOX1-202ENST00000418336 HSP90AB2PQ58FF8 381 aa28.49■■■□□ 2.15
PKNOX1-202ENST00000418336 EMILIN1Q9Y6C2 1016 aa28.49■■■□□ 2.15
PKNOX1-202ENST00000418336 LTV1Q96GA3 475 aaPredicted RBP28.48■■■□□ 2.15
PKNOX1-202ENST00000418336 FLT4P35916 1363 aa28.48■■■□□ 2.15
PKNOX1-202ENST00000418336 MAP2P11137 1827 aaKnown RBP28.47■■■□□ 2.15
PKNOX1-202ENST00000418336 IL2RBP14784 551 aa28.46■■■□□ 2.15
PKNOX1-202ENST00000418336 SF3B2Q13435 895 aaKnown RBP28.46■■■□□ 2.15
PKNOX1-202ENST00000418336 PTF1AQ7RTS3 328 aa28.45■■■□□ 2.14
PKNOX1-202ENST00000418336 CAMKK2Q96RR4 588 aa28.45■■■□□ 2.14
PKNOX1-202ENST00000418336 SHANK3Q9BYB0 1731 aa28.45■■■□□ 2.14
PKNOX1-202ENST00000418336 EN1Q05925 392 aaPredicted RBP28.44■■■□□ 2.14
PKNOX1-202ENST00000418336 NBPF6Q5VWK0 638 aa28.44■■■□□ 2.14
PKNOX1-202ENST00000418336 NBPF4Q96M43 638 aa28.44■■■□□ 2.14
PKNOX1-202ENST00000418336 POLKQ9UBT6 870 aa28.44■■■□□ 2.14
PKNOX1-202ENST00000418336 NSD2O96028 1365 aa28.44■■■□□ 2.14
PKNOX1-202ENST00000418336 WASHC2AQ641Q2 1341 aa28.43■■■□□ 2.14
PKNOX1-202ENST00000418336 NCAPD2Q15021 1401 aa28.43■■■□□ 2.14
PKNOX1-202ENST00000418336 MEGF6O75095 1541 aa28.43■■■□□ 2.14
PKNOX1-202ENST00000418336 RREB1Q92766 1687 aa28.43■■■□□ 2.14
PKNOX1-202ENST00000418336 EXOC5O00471 708 aa28.43■■■□□ 2.14
PKNOX1-202ENST00000418336 BAG6P46379 1132 aa28.43■■■□□ 2.14
PKNOX1-202ENST00000418336 SMG6Q86US8 1419 aaKnown RBP28.43■■■□□ 2.14
PKNOX1-202ENST00000418336 PER1O15534 1290 aaPredicted RBP28.42■■■□□ 2.14
PKNOX1-202ENST00000418336 AMER1Q5JTC6 1135 aaPredicted RBP28.41■■■□□ 2.14
PKNOX1-202ENST00000418336 EZH2Q15910 746 aaKnown RBP28.39■■■□□ 2.14
PKNOX1-202ENST00000418336 SRCAPQ6ZRS2 3230 aa28.39■■■□□ 2.13
PKNOX1-202ENST00000418336 RGPD3A6NKT7 1758 aaPredicted RBP28.38■■■□□ 2.13
PKNOX1-202ENST00000418336 RGPD4Q7Z3J3 1758 aa28.38■■■□□ 2.13
PKNOX1-202ENST00000418336 APBA3O96018 575 aa28.37■■■□□ 2.13
PKNOX1-202ENST00000418336 NHSQ6T4R5 1651 aa28.36■■■□□ 2.13
PKNOX1-202ENST00000418336 NUP188Q5SRE5 1749 aa28.36■■■□□ 2.13
PKNOX1-202ENST00000418336 USHBP1Q8N6Y0 703 aa28.35■■■□□ 2.13
PKNOX1-202ENST00000418336 PARD3Q8TEW0 1356 aa28.35■■■□□ 2.13
PKNOX1-202ENST00000418336 BCL11BQ9C0K0 894 aaPredicted RBP28.34■■■□□ 2.13
PKNOX1-202ENST00000418336 TNNT2P45379 298 aaPredicted RBP28.32■■■□□ 2.12
PKNOX1-202ENST00000418336 KNSTRNQ9Y448 316 aa28.32■■■□□ 2.12
PKNOX1-202ENST00000418336 KCNQ2O43526 872 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms