RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ALDH1L2Q3SY69 923 aa14.87□□□□□ -0.03
LIMK1-202ENST00000418310 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
LIMK1-202ENST00000418310 PPIP5K1Q6PFW1 1433 aa14.87□□□□□ -0.03
LIMK1-202ENST00000418310 IL13P35225 146 aa14.87□□□□□ -0.03
LIMK1-202ENST00000418310 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
LIMK1-202ENST00000418310 TBC1D9Q6ZT07 1266 aa14.86□□□□□ -0.03
LIMK1-202ENST00000418310 SMARCA5O60264 1052 aaPredicted RBP14.86□□□□□ -0.03
LIMK1-202ENST00000418310 OTUD7AQ8TE49 926 aaPredicted RBP14.85□□□□□ -0.03
LIMK1-202ENST00000418310 CFAP74Q9C0B2 1584 aa14.85□□□□□ -0.03
LIMK1-202ENST00000418310 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
LIMK1-202ENST00000418310 XRCC6P12956 609 aaKnown RBP eCLIP14.85□□□□□ -0.03
LIMK1-202ENST00000418310 NEO1Q92859 1461 aa14.85□□□□□ -0.03
LIMK1-202ENST00000418310 ALKQ9UM73 1620 aa14.84□□□□□ -0.03
LIMK1-202ENST00000418310 SLC4A10Q6U841 1118 aa14.84□□□□□ -0.03
LIMK1-202ENST00000418310 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
LIMK1-202ENST00000418310 PNPLA6Q8IY17 1366 aa14.84□□□□□ -0.03
LIMK1-202ENST00000418310 METP08581 1390 aa14.84□□□□□ -0.03
LIMK1-202ENST00000418310 FAM135BQ49AJ0 1406 aa14.84□□□□□ -0.03
LIMK1-202ENST00000418310 ARHGEF40Q8TER5 1519 aa14.84□□□□□ -0.03
LIMK1-202ENST00000418310 ARHGAP31Q2M1Z3 1444 aa14.83□□□□□ -0.04
LIMK1-202ENST00000418310 RRAGDQ9NQL2 400 aaPredicted RBP14.83□□□□□ -0.04
LIMK1-202ENST00000418310 IFT57Q9NWB7 429 aa14.83□□□□□ -0.04
LIMK1-202ENST00000418310 RIMS2Q9UQ26 1411 aa14.83□□□□□ -0.04
LIMK1-202ENST00000418310 L1TD1Q5T7N2 865 aaKnown RBP14.82□□□□□ -0.04
LIMK1-202ENST00000418310 TNPO1Q92973 898 aaKnown RBP14.82□□□□□ -0.04
LIMK1-202ENST00000418310 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
LIMK1-202ENST00000418310 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
LIMK1-202ENST00000418310 HSP90AB2PQ58FF8 381 aa14.82□□□□□ -0.04
LIMK1-202ENST00000418310 BMP2KLQ5H9B9 411 aa14.81□□□□□ -0.04
LIMK1-202ENST00000418310 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
LIMK1-202ENST00000418310 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
LIMK1-202ENST00000418310 FOXO3O43524 673 aa14.81□□□□□ -0.04
LIMK1-202ENST00000418310 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
LIMK1-202ENST00000418310 ZFYVE9O95405 1425 aa14.81□□□□□ -0.04
LIMK1-202ENST00000418310 GCC1Q96CN9 775 aa14.81□□□□□ -0.04
LIMK1-202ENST00000418310 PREX1Q8TCU6 1659 aa14.8□□□□□ -0.04
LIMK1-202ENST00000418310 F6X3S4 739 aa14.8□□□□□ -0.04
LIMK1-202ENST00000418310 GSPT1P15170 499 aaKnown RBP14.8□□□□□ -0.04
LIMK1-202ENST00000418310 NUTM2GQ5VZR2 741 aa14.8□□□□□ -0.04
LIMK1-202ENST00000418310 TSHZ3Q63HK5 1081 aa14.8□□□□□ -0.04
LIMK1-202ENST00000418310 SLC26A8Q96RN1 970 aa14.8□□□□□ -0.04
LIMK1-202ENST00000418310 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
LIMK1-202ENST00000418310 SSFA2P28290 1259 aa14.79□□□□□ -0.04
LIMK1-202ENST00000418310 FOXD4L5Q5VV16 416 aaPredicted RBP14.79□□□□□ -0.04
LIMK1-202ENST00000418310 GAS2L2Q8NHY3 880 aa14.79□□□□□ -0.04
LIMK1-202ENST00000418310 FOXD4L4Q8WXT5 416 aaPredicted RBP14.79□□□□□ -0.04
LIMK1-202ENST00000418310 KIF2CQ99661 725 aa14.79□□□□□ -0.04
LIMK1-202ENST00000418310 API5Q9BZZ5 524 aaKnown RBP14.79□□□□□ -0.04
LIMK1-202ENST00000418310 TSPOAP1O95153 1857 aa14.79□□□□□ -0.04
LIMK1-202ENST00000418310 RBM25P49756 843 aaKnown RBP14.79□□□□□ -0.04
LIMK1-202ENST00000418310 MEIS3Q99687 375 aa14.79□□□□□ -0.04
LIMK1-202ENST00000418310 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
LIMK1-202ENST00000418310 PRR36Q9H6K5 1346 aa14.78□□□□□ -0.04
LIMK1-202ENST00000418310 NCLP19338 710 aaKnown RBP14.78□□□□□ -0.04
LIMK1-202ENST00000418310 MAP2P11137 1827 aaKnown RBP14.78□□□□□ -0.04
LIMK1-202ENST00000418310 ABCC4O15439 1325 aa14.77□□□□□ -0.04
LIMK1-202ENST00000418310 ZMYM3Q14202 1370 aa14.77□□□□□ -0.04
LIMK1-202ENST00000418310 ZNF853P0CG23 659 aa14.77□□□□□ -0.04
LIMK1-202ENST00000418310 LMOD3Q0VAK6 560 aa14.77□□□□□ -0.04
LIMK1-202ENST00000418310 CDC45O75419 566 aa14.77□□□□□ -0.05
LIMK1-202ENST00000418310 FAM43AQ8N2R8 423 aa14.77□□□□□ -0.05
LIMK1-202ENST00000418310 CPS1P31327 1500 aa14.77□□□□□ -0.05
LIMK1-202ENST00000418310 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
LIMK1-202ENST00000418310 NOL8Q76FK4 1167 aaKnown RBP14.76□□□□□ -0.05
LIMK1-202ENST00000418310 PLEKHM2Q8IWE5 1019 aa14.76□□□□□ -0.05
LIMK1-202ENST00000418310 LTV1Q96GA3 475 aaPredicted RBP14.76□□□□□ -0.05
LIMK1-202ENST00000418310 K7ELQ4 463 aaPredicted RBP14.76□□□□□ -0.05
LIMK1-202ENST00000418310 RICTORQ6R327 1708 aa14.75□□□□□ -0.05
LIMK1-202ENST00000418310 A2ML1A8K2U0 1454 aa14.75□□□□□ -0.05
LIMK1-202ENST00000418310 DDX11L8A8MPP1 907 aa14.75□□□□□ -0.05
LIMK1-202ENST00000418310 G2E3Q7L622 706 aa14.75□□□□□ -0.05
LIMK1-202ENST00000418310 CHAMP1Q96JM3 812 aa14.75□□□□□ -0.05
LIMK1-202ENST00000418310 MED14O60244 1454 aa14.75□□□□□ -0.05
LIMK1-202ENST00000418310 CEBPAP49715 358 aaPredicted RBP14.74□□□□□ -0.05
LIMK1-202ENST00000418310 ARHGAP45Q92619 1136 aa14.74□□□□□ -0.05
LIMK1-202ENST00000418310 CHMP4BQ9H444 224 aaKnown RBP14.74□□□□□ -0.05
LIMK1-202ENST00000418310 ACEP12821 1306 aa14.74□□□□□ -0.05
LIMK1-202ENST00000418310 EDC4Q6P2E9 1401 aaKnown RBP14.74□□□□□ -0.05
LIMK1-202ENST00000418310 ZNF428Q96B54 188 aa14.74□□□□□ -0.05
LIMK1-202ENST00000418310 MSH6P52701 1360 aa14.74□□□□□ -0.05
LIMK1-202ENST00000418310 ZBTB7CA1YPR0 619 aa14.74□□□□□ -0.05
LIMK1-202ENST00000418310 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
LIMK1-202ENST00000418310 GBP4Q96PP9 640 aa14.74□□□□□ -0.05
LIMK1-202ENST00000418310 C14orf37Q86TY3 774 aa14.73□□□□□ -0.05
LIMK1-202ENST00000418310 GAS2L3Q86XJ1 694 aa14.73□□□□□ -0.05
LIMK1-202ENST00000418310 GRPEL1Q9HAV7 217 aa14.73□□□□□ -0.05
LIMK1-202ENST00000418310 EXOC6BQ9Y2D4 811 aa14.73□□□□□ -0.05
LIMK1-202ENST00000418310 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
LIMK1-202ENST00000418310 PKP1Q13835 747 aa14.73□□□□□ -0.05
LIMK1-202ENST00000418310 TSPYL4Q9UJ04 414 aa14.73□□□□□ -0.05
LIMK1-202ENST00000418310 KIF20BQ96Q89 1820 aa14.72□□□□□ -0.05
LIMK1-202ENST00000418310 SNX21Q969T3 373 aa14.72□□□□□ -0.05
LIMK1-202ENST00000418310 NAP1L5Q96NT1 182 aaPredicted RBP14.72□□□□□ -0.05
LIMK1-202ENST00000418310 TTC21BQ7Z4L5 1316 aa14.72□□□□□ -0.05
LIMK1-202ENST00000418310 ATP7BP35670 1465 aa14.71□□□□□ -0.05
LIMK1-202ENST00000418310 SDSP20132 328 aa14.71□□□□□ -0.05
LIMK1-202ENST00000418310 CEP85Q6P2H3 762 aa14.71□□□□□ -0.05
LIMK1-202ENST00000418310 FOXD4L6Q3SYB3 417 aaPredicted RBP14.71□□□□□ -0.05
LIMK1-202ENST00000418310 TTC22Q5TAA0 569 aa14.71□□□□□ -0.05
LIMK1-202ENST00000418310 FOXD4L3Q6VB84 417 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms