RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 CSB-PGBD3P0DP91 1061 aa20■□□□□ 0.79
LINC01006-202ENST00000418309 CAMKK2Q96RR4 588 aa20■□□□□ 0.79
LINC01006-202ENST00000418309 R3HDM1Q15032 1099 aaKnown RBP19.99■□□□□ 0.79
LINC01006-202ENST00000418309 HDGFL2Q7Z4V5 671 aaPredicted RBP19.99■□□□□ 0.79
LINC01006-202ENST00000418309 WDR17Q8IZU2 1322 aa19.99■□□□□ 0.79
LINC01006-202ENST00000418309 COL18A1P39060 1754 aa19.98■□□□□ 0.79
LINC01006-202ENST00000418309 DDB1Q16531 1140 aa19.98■□□□□ 0.79
LINC01006-202ENST00000418309 SLC12A5Q9H2X9 1139 aa19.98■□□□□ 0.79
LINC01006-202ENST00000418309 PARP4Q9UKK3 1724 aaKnown RBP19.97■□□□□ 0.79
LINC01006-202ENST00000418309 RGPD5Q99666 1765 aa19.96■□□□□ 0.79
LINC01006-202ENST00000418309 C11orf95C9JLR9 678 aaPredicted RBP19.96■□□□□ 0.79
LINC01006-202ENST00000418309 NME9Q86XW9 330 aa19.95■□□□□ 0.78
LINC01006-202ENST00000418309 TERF2IPQ9NYB0 399 aa19.95■□□□□ 0.78
LINC01006-202ENST00000418309 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
LINC01006-202ENST00000418309 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
LINC01006-202ENST00000418309 CDCA7Q9BWT1 371 aaPredicted RBP19.93■□□□□ 0.78
LINC01006-202ENST00000418309 CARD10Q9BWT7 1032 aa19.93■□□□□ 0.78
LINC01006-202ENST00000418309 OVOS2A0A0G2JMS6 1433 aa19.93■□□□□ 0.78
LINC01006-202ENST00000418309 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
LINC01006-202ENST00000418309 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
LINC01006-202ENST00000418309 ST20-MTHFSA0A0A6YYL1 179 aa19.92■□□□□ 0.78
LINC01006-202ENST00000418309 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
LINC01006-202ENST00000418309 NBPF14Q5TI25 921 aa19.92■□□□□ 0.78
LINC01006-202ENST00000418309 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
LINC01006-202ENST00000418309 CD163L1Q9NR16 1453 aa19.92■□□□□ 0.78
LINC01006-202ENST00000418309 NFAT5O94916 1531 aa19.92■□□□□ 0.78
LINC01006-202ENST00000418309 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
LINC01006-202ENST00000418309 LRP5O75197 1615 aa19.91■□□□□ 0.78
LINC01006-202ENST00000418309 LRRC37A3O60309 1634 aa19.9■□□□□ 0.78
LINC01006-202ENST00000418309 EXOC5O00471 708 aa19.89■□□□□ 0.77
LINC01006-202ENST00000418309 EDC4Q6P2E9 1401 aaKnown RBP19.89■□□□□ 0.77
LINC01006-202ENST00000418309 MARCH10Q8NA82 808 aaPredicted RBP19.89■□□□□ 0.77
LINC01006-202ENST00000418309 A0A1W2PP64 1363 aa19.88■□□□□ 0.77
LINC01006-202ENST00000418309 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
LINC01006-202ENST00000418309 TESK2Q96S53 571 aa19.88■□□□□ 0.77
LINC01006-202ENST00000418309 NLRP2Q9NX02 1062 aa19.88■□□□□ 0.77
LINC01006-202ENST00000418309 CCDC7Q96M83 1385 aa19.87■□□□□ 0.77
LINC01006-202ENST00000418309 WNK3Q9BYP7 1800 aa19.87■□□□□ 0.77
LINC01006-202ENST00000418309 PEAK1Q9H792 1746 aa19.86■□□□□ 0.77
LINC01006-202ENST00000418309 BCL11BQ9C0K0 894 aaPredicted RBP19.86■□□□□ 0.77
LINC01006-202ENST00000418309 RREB1Q92766 1687 aa19.86■□□□□ 0.77
LINC01006-202ENST00000418309 SBF2Q86WG5 1849 aa19.86■□□□□ 0.77
LINC01006-202ENST00000418309 ABCC6O95255 1503 aa19.85■□□□□ 0.77
LINC01006-202ENST00000418309 LTN1O94822 1766 aa19.85■□□□□ 0.77
LINC01006-202ENST00000418309 NUP188Q5SRE5 1749 aa19.85■□□□□ 0.77
LINC01006-202ENST00000418309 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
LINC01006-202ENST00000418309 ERBB3P21860 1342 aa19.84■□□□□ 0.77
LINC01006-202ENST00000418309 PLSCR1O15162 318 aa19.84■□□□□ 0.77
LINC01006-202ENST00000418309 PTF1AQ7RTS3 328 aa19.84■□□□□ 0.77
LINC01006-202ENST00000418309 ANKRD24Q8TF21 1146 aa19.84■□□□□ 0.77
LINC01006-202ENST00000418309 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.77
LINC01006-202ENST00000418309 COG3Q96JB2 828 aa19.82■□□□□ 0.76
LINC01006-202ENST00000418309 TMF1P82094 1093 aa19.81■□□□□ 0.76
LINC01006-202ENST00000418309 IL2RBP14784 551 aa19.8■□□□□ 0.76
LINC01006-202ENST00000418309 LTV1Q96GA3 475 aaPredicted RBP19.8■□□□□ 0.76
LINC01006-202ENST00000418309 BCL9O00512 1426 aa19.79■□□□□ 0.76
LINC01006-202ENST00000418309 IP6K1Q92551 441 aa19.79■□□□□ 0.76
LINC01006-202ENST00000418309 USP47Q96K76 1375 aa19.79■□□□□ 0.76
LINC01006-202ENST00000418309 TNS2Q63HR2 1409 aa19.77■□□□□ 0.76
LINC01006-202ENST00000418309 AMPHP49418 695 aa19.77■□□□□ 0.76
LINC01006-202ENST00000418309 ACSBG1Q96GR2 724 aa19.77■□□□□ 0.76
LINC01006-202ENST00000418309 KAT6BQ8WYB5 2073 aa19.76■□□□□ 0.75
LINC01006-202ENST00000418309 ANKRD36BQ8N2N9 1353 aa19.76■□□□□ 0.75
LINC01006-202ENST00000418309 KCNQ2O43526 872 aa19.76■□□□□ 0.75
LINC01006-202ENST00000418309 FBLN1P23142 703 aa19.76■□□□□ 0.75
LINC01006-202ENST00000418309 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
LINC01006-202ENST00000418309 RGPD3A6NKT7 1758 aaPredicted RBP19.75■□□□□ 0.75
LINC01006-202ENST00000418309 RGPD4Q7Z3J3 1758 aa19.75■□□□□ 0.75
LINC01006-202ENST00000418309 PROM2Q8N271 834 aa19.75■□□□□ 0.75
LINC01006-202ENST00000418309 SPON1Q9HCB6 807 aa19.75■□□□□ 0.75
LINC01006-202ENST00000418309 TXNRD1Q16881 649 aa19.74■□□□□ 0.75
LINC01006-202ENST00000418309 CDCA8Q53HL2 280 aa19.74■□□□□ 0.75
LINC01006-202ENST00000418309 PPP1R1BQ9UD71 204 aaPredicted RBP19.74■□□□□ 0.75
LINC01006-202ENST00000418309 MAP3K19Q56UN5 1328 aa19.74■□□□□ 0.75
LINC01006-202ENST00000418309 GGNBP2Q9H3C7 697 aa19.73■□□□□ 0.75
LINC01006-202ENST00000418309 ANO8Q9HCE9 1232 aaPredicted RBP19.73■□□□□ 0.75
LINC01006-202ENST00000418309 HOXC9P31274 260 aa19.72■□□□□ 0.75
LINC01006-202ENST00000418309 DDX54Q8TDD1 881 aaKnown RBP19.72■□□□□ 0.75
LINC01006-202ENST00000418309 FYB1O15117 783 aa19.71■□□□□ 0.75
LINC01006-202ENST00000418309 STK32BQ9NY57 414 aa19.71■□□□□ 0.75
LINC01006-202ENST00000418309 RRS1Q15050 365 aaKnown RBP19.7■□□□□ 0.74
LINC01006-202ENST00000418309 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
LINC01006-202ENST00000418309 NHSQ6T4R5 1651 aa19.68■□□□□ 0.74
LINC01006-202ENST00000418309 FAM208AQ9UK61 1670 aaKnown RBP19.68■□□□□ 0.74
LINC01006-202ENST00000418309 SLC15A2Q16348 729 aa19.66■□□□□ 0.74
LINC01006-202ENST00000418309 PDGFDQ9GZP0 370 aaPredicted RBP19.66■□□□□ 0.74
LINC01006-202ENST00000418309 CLSPNQ9HAW4 1339 aa19.66■□□□□ 0.74
LINC01006-202ENST00000418309 ZBTB7AO95365 584 aa19.65■□□□□ 0.74
LINC01006-202ENST00000418309 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
LINC01006-202ENST00000418309 SYTL4Q96C24 671 aaPredicted RBP19.64■□□□□ 0.73
LINC01006-202ENST00000418309 RTL1A6NKG5 1358 aa19.64■□□□□ 0.73
LINC01006-202ENST00000418309 BTAF1O14981 1849 aa19.63■□□□□ 0.73
LINC01006-202ENST00000418309 ZCRB1Q8TBF4 217 aaKnown RBP19.63■□□□□ 0.73
LINC01006-202ENST00000418309 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
LINC01006-202ENST00000418309 ATF5Q9Y2D1 282 aaPredicted RBP19.63■□□□□ 0.73
LINC01006-202ENST00000418309 SMG6Q86US8 1419 aaKnown RBP19.62■□□□□ 0.73
LINC01006-202ENST00000418309 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
LINC01006-202ENST00000418309 USHBP1Q8N6Y0 703 aa19.62■□□□□ 0.73
LINC01006-202ENST00000418309 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
LINC01006-202ENST00000418309 CARD14Q9BXL6 1004 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms