RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 NEO1Q92859 1461 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 NRXN1Q9ULB1 1477 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 CFAP65Q6ZU64 1925 aaKnown RBP9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 CBX1P83916 185 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 TMEM57Q8N5G2 664 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 SSH1Q8WYL5 1049 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 TMEM63CQ9P1W3 806 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 NOS1P29475 1434 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 SETD1AO15047 1707 aaKnown RBP9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 ADGRB3O60242 1522 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 PRPF40AO75400 957 aaKnown RBP9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 RABEP1Q15276 862 aa9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.87□□□□□ -0.83
HMGXB4-202ENST00000418170 MYO3AQ8NEV4 1616 aa9.86□□□□□ -0.83
HMGXB4-202ENST00000418170 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
HMGXB4-202ENST00000418170 PKP1Q13835 747 aa9.86□□□□□ -0.83
HMGXB4-202ENST00000418170 SYCE3A1L190 88 aa9.86□□□□□ -0.83
HMGXB4-202ENST00000418170 CWC22Q9HCG8 908 aaKnown RBP9.86□□□□□ -0.83
HMGXB4-202ENST00000418170 ABCC3O15438 1527 aa9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 JARID2Q92833 1246 aaPredicted RBP9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 EXOSC9Q06265 439 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 ATP2B3Q16720 1220 aa9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 DNTTIP2Q5QJE6 756 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 CD109Q6YHK3 1445 aa9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 TSR2Q969E8 191 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 NOB1Q9ULX3 412 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 PREX1Q8TCU6 1659 aa9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 PTMAP06454 111 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 PIBF1Q8WXW3 757 aa9.85□□□□□ -0.83
HMGXB4-202ENST00000418170 ABCC11Q96J66 1382 aa9.84□□□□□ -0.83
HMGXB4-202ENST00000418170 TSC1Q92574 1164 aa9.84□□□□□ -0.83
HMGXB4-202ENST00000418170 CDC45O75419 566 aa9.84□□□□□ -0.83
HMGXB4-202ENST00000418170 GCC1Q96CN9 775 aa9.84□□□□□ -0.83
HMGXB4-202ENST00000418170 NSD3Q9BZ95 1437 aa9.84□□□□□ -0.83
HMGXB4-202ENST00000418170 KIF3AQ9Y496 699 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 MED14O60244 1454 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 USP32Q8NFA0 1604 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 MBD3O95983 291 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 ANKRD45Q5TZF3 282 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 RNF214Q8ND24 703 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 IPO8O15397 1037 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 EFCAB2Q5VUJ9 269 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 TAF3Q5VWG9 929 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 CFAP53Q96M91 514 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 NSFL1CQ9UNZ2 370 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 PPIP5K1Q6PFW1 1433 aa9.83□□□□□ -0.84
HMGXB4-202ENST00000418170 NOLC1Q14978 699 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGXB4-202ENST00000418170 MTHFSP49914 203 aa9.82□□□□□ -0.84
HMGXB4-202ENST00000418170 SBNO2Q9Y2G9 1366 aa9.82□□□□□ -0.84
HMGXB4-202ENST00000418170 YEATS2Q9ULM3 1422 aa9.82□□□□□ -0.84
HMGXB4-202ENST00000418170 TSPY26PQ9H489 355 aa9.82□□□□□ -0.84
HMGXB4-202ENST00000418170 FKBP5Q13451 457 aaPredicted RBP9.81□□□□□ -0.84
HMGXB4-202ENST00000418170 CFAP44Q96MT7 982 aa9.81□□□□□ -0.84
HMGXB4-202ENST00000418170 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
HMGXB4-202ENST00000418170 SPTLC3Q9NUV7 552 aa9.81□□□□□ -0.84
HMGXB4-202ENST00000418170 ZGPATQ8N5A5 531 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-202ENST00000418170 TMEM51Q9NW97 253 aa9.81□□□□□ -0.84
HMGXB4-202ENST00000418170 TMEM131LA2VDJ0 1609 aa9.81□□□□□ -0.84
HMGXB4-202ENST00000418170 PDCL2Q8N4E4 241 aa9.8□□□□□ -0.84
HMGXB4-202ENST00000418170 NPATQ14207 1427 aa9.8□□□□□ -0.84
HMGXB4-202ENST00000418170 ADGRB1O14514 1584 aa9.8□□□□□ -0.84
HMGXB4-202ENST00000418170 IL16Q14005 1332 aa9.8□□□□□ -0.84
HMGXB4-202ENST00000418170 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
HMGXB4-202ENST00000418170 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGXB4-202ENST00000418170 USP26Q9BXU7 913 aa9.8□□□□□ -0.84
HMGXB4-202ENST00000418170 ZBTB7CA1YPR0 619 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 ST18O60284 1047 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 GSPT1P15170 499 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 NEXMIFQ5QGS0 1516 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 SPDYE4A6NLX3 237 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 ALDH1L2Q3SY69 923 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 ANKRD7Q92527 254 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 CHAMP1Q96JM3 812 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 TRIM35Q9UPQ4 493 aa9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 ARHGEF28Q8N1W1 1705 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-202ENST00000418170 FAM177BA6PVY3 158 aa9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 UVSSAQ2YD98 709 aa9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 FAM184AQ8NB25 1140 aa9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 SYAP1Q96A49 352 aaPredicted RBP9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 CHMP4BQ9H444 224 aaKnown RBP9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 ZNF830Q96NB3 372 aaPredicted RBP9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 MYOM2P54296 1465 aa9.78□□□□□ -0.84
HMGXB4-202ENST00000418170 TMPOP42166 694 aaKnown RBP9.77□□□□□ -0.84
HMGXB4-202ENST00000418170 FEZ1Q99689 392 aa9.77□□□□□ -0.84
HMGXB4-202ENST00000418170 NAP1L2Q9ULW6 460 aaPredicted RBP9.77□□□□□ -0.84
HMGXB4-202ENST00000418170 PHF14O94880 888 aa9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 CLTCQ00610 1675 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 SPAG9O60271 1321 aaKnown RBP9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 CFAP70Q5T0N1 1121 aa9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 PLEKHF1Q96S99 279 aa9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 TTC12Q9H892 705 aaPredicted RBP9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 PIK3R4Q99570 1358 aa9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 U2AF2P26368 475 aaKnown RBP eCLIP9.77□□□□□ -0.852e-9■□□□□ 8.1
HMGXB4-202ENST00000418170 BRPF1P55201 1214 aaPredicted RBP9.77□□□□□ -0.85
HMGXB4-202ENST00000418170 SIRT2Q8IXJ6 389 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms