RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
GABRE-202ENST00000417300 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
GABRE-202ENST00000417300 CAPN15O75808 1086 aa16.04■□□□□ 0.16
GABRE-202ENST00000417300 CABLES1Q8TDN4 633 aa16.04■□□□□ 0.16
GABRE-202ENST00000417300 PLCH1Q4KWH8 1693 aa16.03■□□□□ 0.16
GABRE-202ENST00000417300 FAM83GA6ND36 823 aa16.03■□□□□ 0.16
GABRE-202ENST00000417300 SYT17Q9BSW7 474 aa16.03■□□□□ 0.16
GABRE-202ENST00000417300 POLR3AO14802 1390 aaPredicted RBP16.02■□□□□ 0.16
GABRE-202ENST00000417300 PPP2R1AP30153 589 aa16.02■□□□□ 0.16
GABRE-202ENST00000417300 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
GABRE-202ENST00000417300 NUP188Q5SRE5 1749 aa16.02■□□□□ 0.15
GABRE-202ENST00000417300 RREB1Q92766 1687 aa16.02■□□□□ 0.15
GABRE-202ENST00000417300 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
GABRE-202ENST00000417300 FHDC1Q9C0D6 1143 aaPredicted RBP16.01■□□□□ 0.15
GABRE-202ENST00000417300 SLC34A2O95436 690 aa16■□□□□ 0.15
GABRE-202ENST00000417300 BTG4Q9NY30 223 aa16■□□□□ 0.15
GABRE-202ENST00000417300 USP6P35125 1406 aa16■□□□□ 0.15
GABRE-202ENST00000417300 ACEP12821 1306 aa15.99■□□□□ 0.15
GABRE-202ENST00000417300 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
GABRE-202ENST00000417300 HSPA6P17066 643 aa15.99■□□□□ 0.15
GABRE-202ENST00000417300 MORC1Q86VD1 984 aa15.99■□□□□ 0.15
GABRE-202ENST00000417300 SSH2Q76I76 1423 aa15.99■□□□□ 0.15
GABRE-202ENST00000417300 FYB1O15117 783 aa15.98■□□□□ 0.15
GABRE-202ENST00000417300 ZBTB7AO95365 584 aa15.98■□□□□ 0.15
GABRE-202ENST00000417300 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
GABRE-202ENST00000417300 PNISRQ8TF01 805 aaKnown RBP15.97■□□□□ 0.15
GABRE-202ENST00000417300 ATF5Q9Y2D1 282 aaPredicted RBP15.97■□□□□ 0.15
GABRE-202ENST00000417300 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
GABRE-202ENST00000417300 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
GABRE-202ENST00000417300 KIF1AQ12756 1690 aa15.96■□□□□ 0.15
GABRE-202ENST00000417300 PTGER2P43116 358 aa15.96■□□□□ 0.15
GABRE-202ENST00000417300 GPR162Q16538 588 aa15.96■□□□□ 0.15
GABRE-202ENST00000417300 LMOD2Q6P5Q4 547 aa15.96■□□□□ 0.15
GABRE-202ENST00000417300 GGNBP2Q9H3C7 697 aa15.95■□□□□ 0.14
GABRE-202ENST00000417300 INSRP06213 1382 aa15.95■□□□□ 0.14
GABRE-202ENST00000417300 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
GABRE-202ENST00000417300 TTC21BQ7Z4L5 1316 aa15.94■□□□□ 0.14
GABRE-202ENST00000417300 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
GABRE-202ENST00000417300 TTC21AQ8NDW8 1320 aa15.94■□□□□ 0.14
GABRE-202ENST00000417300 PSME1Q06323 249 aa15.93■□□□□ 0.14
GABRE-202ENST00000417300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.93■□□□□ 0.14
GABRE-202ENST00000417300 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
GABRE-202ENST00000417300 NGDNQ8NEJ9 315 aaKnown RBP15.93■□□□□ 0.14
GABRE-202ENST00000417300 PMFBP1Q8TBY8 1022 aa15.93■□□□□ 0.14
GABRE-202ENST00000417300 PHF8Q9UPP1 1060 aa15.93■□□□□ 0.14
GABRE-202ENST00000417300 OVOS2A0A0J9YW53 1432 aa15.93■□□□□ 0.14
GABRE-202ENST00000417300 OVOS2Q6IE36 1432 aa15.93■□□□□ 0.14
GABRE-202ENST00000417300 PDGFDQ9GZP0 370 aaPredicted RBP15.92■□□□□ 0.14
GABRE-202ENST00000417300 TNS3Q68CZ2 1445 aa15.92■□□□□ 0.14
GABRE-202ENST00000417300 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
GABRE-202ENST00000417300 PRELPP51888 382 aa15.91■□□□□ 0.14
GABRE-202ENST00000417300 PDE3BQ13370 1112 aa15.91■□□□□ 0.14
GABRE-202ENST00000417300 NME9Q86XW9 330 aa15.91■□□□□ 0.14
GABRE-202ENST00000417300 PIK3C2AO00443 1686 aa15.91■□□□□ 0.14
GABRE-202ENST00000417300 AATKQ6ZMQ8 1374 aa15.9■□□□□ 0.14
GABRE-202ENST00000417300 NRAPQ86VF7 1730 aa15.9■□□□□ 0.14
GABRE-202ENST00000417300 USP31Q70CQ4 1352 aa15.89■□□□□ 0.13
GABRE-202ENST00000417300 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
GABRE-202ENST00000417300 COG3Q96JB2 828 aa15.88■□□□□ 0.13
GABRE-202ENST00000417300 ANO8Q9HCE9 1232 aaPredicted RBP15.88■□□□□ 0.13
GABRE-202ENST00000417300 PCDH10Q9P2E7 1040 aa15.88■□□□□ 0.13
GABRE-202ENST00000417300 CASZ1Q86V15 1759 aa15.87■□□□□ 0.13
GABRE-202ENST00000417300 MAP2P11137 1827 aaKnown RBP15.87■□□□□ 0.13
GABRE-202ENST00000417300 COL3A1P02461 1466 aaPredicted RBP15.87■□□□□ 0.13
GABRE-202ENST00000417300 TNNT2P45379 298 aaPredicted RBP15.87■□□□□ 0.13
GABRE-202ENST00000417300 COL13A1Q5TAT6 717 aaPredicted RBP15.87■□□□□ 0.13
GABRE-202ENST00000417300 TRPM3Q9HCF6 1732 aaPredicted RBP15.87■□□□□ 0.13
GABRE-202ENST00000417300 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
GABRE-202ENST00000417300 MTHFSP49914 203 aa15.86■□□□□ 0.13
GABRE-202ENST00000417300 HNRNPUQ00839 825 aaKnown RBP eCLIP15.86■□□□□ 0.13
GABRE-202ENST00000417300 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
GABRE-202ENST00000417300 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
GABRE-202ENST00000417300 SHANK3Q9BYB0 1731 aa15.85■□□□□ 0.13
GABRE-202ENST00000417300 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
GABRE-202ENST00000417300 TNS4Q8IZW8 715 aa15.85■□□□□ 0.13
GABRE-202ENST00000417300 ARXQ96QS3 562 aa15.85■□□□□ 0.13
GABRE-202ENST00000417300 SPATA31A1Q5TZJ5 1347 aa15.85■□□□□ 0.13
GABRE-202ENST00000417300 WDR43Q15061 677 aaKnown RBP eCLIP15.84■□□□□ 0.13
GABRE-202ENST00000417300 MTFR1LQ9H019 292 aa15.83■□□□□ 0.12
GABRE-202ENST00000417300 SBNO1A3KN83 1393 aa15.83■□□□□ 0.12
GABRE-202ENST00000417300 ABCA3Q99758 1704 aa15.82■□□□□ 0.12
GABRE-202ENST00000417300 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
GABRE-202ENST00000417300 GPBP1L1Q9HC44 474 aaPredicted RBP15.82■□□□□ 0.12
GABRE-202ENST00000417300 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
GABRE-202ENST00000417300 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
GABRE-202ENST00000417300 PLSCR1O15162 318 aa15.81■□□□□ 0.12
GABRE-202ENST00000417300 ALS2Q96Q42 1657 aa15.81■□□□□ 0.12
GABRE-202ENST00000417300 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
GABRE-202ENST00000417300 MAP3K5Q99683 1374 aa15.8■□□□□ 0.12
GABRE-202ENST00000417300 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
GABRE-202ENST00000417300 STK32BQ9NY57 414 aa15.8■□□□□ 0.12
GABRE-202ENST00000417300 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
GABRE-202ENST00000417300 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
GABRE-202ENST00000417300 ATP10DQ9P241 1426 aa15.78■□□□□ 0.12
GABRE-202ENST00000417300 APLP1P51693 650 aa15.78■□□□□ 0.12
GABRE-202ENST00000417300 ABTB2Q8N961 1025 aa15.78■□□□□ 0.12
GABRE-202ENST00000417300 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
GABRE-202ENST00000417300 SLIT3O75094 1523 aa15.78■□□□□ 0.12
GABRE-202ENST00000417300 PEAK1Q9H792 1746 aa15.77■□□□□ 0.12
GABRE-202ENST00000417300 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms