RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TESK2Q96S53 571 aa35.68■■■■□ 3.3
VEGFA-208ENST00000417285 RGPD1P0DJD0 1748 aa35.68■■■■□ 3.3
VEGFA-208ENST00000417285 CDCA7Q9BWT1 371 aaPredicted RBP35.67■■■■□ 3.3
VEGFA-208ENST00000417285 APBA3O96018 575 aa35.66■■■■□ 3.3
VEGFA-208ENST00000417285 CD163L1Q9NR16 1453 aa35.66■■■■□ 3.3
VEGFA-208ENST00000417285 CSB-PGBD3P0DP91 1061 aa35.64■■■■□ 3.3
VEGFA-208ENST00000417285 NME9Q86XW9 330 aa35.64■■■■□ 3.3
VEGFA-208ENST00000417285 CAMKK2Q96RR4 588 aa35.64■■■■□ 3.3
VEGFA-208ENST00000417285 CARD10Q9BWT7 1032 aa35.64■■■■□ 3.3
VEGFA-208ENST00000417285 DDB1Q16531 1140 aa35.63■■■■□ 3.29
VEGFA-208ENST00000417285 COL18A1P39060 1754 aa35.63■■■■□ 3.29
VEGFA-208ENST00000417285 EDC4Q6P2E9 1401 aaKnown RBP35.62■■■■□ 3.29
VEGFA-208ENST00000417285 NINLQ9Y2I6 1382 aa35.62■■■■□ 3.29
VEGFA-208ENST00000417285 EZH2Q15910 746 aaKnown RBP35.61■■■■□ 3.29
VEGFA-208ENST00000417285 TIMELESSQ9UNS1 1208 aa35.61■■■■□ 3.29
VEGFA-208ENST00000417285 PARD3Q8TEW0 1356 aa35.61■■■■□ 3.29
VEGFA-208ENST00000417285 MON2Q7Z3U7 1717 aa35.6■■■■□ 3.29
VEGFA-208ENST00000417285 NFAT5O94916 1531 aa35.58■■■■□ 3.29
VEGFA-208ENST00000417285 CLSPNQ9HAW4 1339 aa35.57■■■■□ 3.29
VEGFA-208ENST00000417285 A0A1W2PP64 1363 aa35.57■■■■□ 3.28
VEGFA-208ENST00000417285 PCGF6Q9BYE7 350 aa35.57■■■■□ 3.28
VEGFA-208ENST00000417285 PARP4Q9UKK3 1724 aaKnown RBP35.56■■■■□ 3.28
VEGFA-208ENST00000417285 PSDA5PKW4 1024 aaPredicted RBP35.55■■■■□ 3.28
VEGFA-208ENST00000417285 ABCC6O95255 1503 aa35.53■■■■□ 3.28
VEGFA-208ENST00000417285 TMF1P82094 1093 aa35.53■■■■□ 3.28
VEGFA-208ENST00000417285 TNS1Q9HBL0 1735 aaKnown RBP35.53■■■■□ 3.28
VEGFA-208ENST00000417285 OVOS2A0A0G2JMS6 1433 aa35.52■■■■□ 3.28
VEGFA-208ENST00000417285 OVOS2A0A0J9YW53 1432 aa35.52■■■■□ 3.28
VEGFA-208ENST00000417285 OVOS2Q6IE36 1432 aa35.52■■■■□ 3.28
VEGFA-208ENST00000417285 CCDC7Q96M83 1385 aa35.51■■■■□ 3.28
VEGFA-208ENST00000417285 EXOC5O00471 708 aa35.5■■■■□ 3.27
VEGFA-208ENST00000417285 R3HDM1Q15032 1099 aaKnown RBP35.49■■■■□ 3.27
VEGFA-208ENST00000417285 CDCA8Q53HL2 280 aa35.48■■■■□ 3.27
VEGFA-208ENST00000417285 USP47Q96K76 1375 aa35.48■■■■□ 3.27
VEGFA-208ENST00000417285 USP54Q70EL1 1684 aa35.46■■■■□ 3.27
VEGFA-208ENST00000417285 MARCH10Q8NA82 808 aaPredicted RBP35.46■■■■□ 3.27
VEGFA-208ENST00000417285 NLRP2Q9NX02 1062 aa35.46■■■■□ 3.27
VEGFA-208ENST00000417285 ERBB3P21860 1342 aa35.46■■■■□ 3.27
VEGFA-208ENST00000417285 NBPF14Q5TI25 921 aa35.45■■■■□ 3.27
VEGFA-208ENST00000417285 COG3Q96JB2 828 aa35.45■■■■□ 3.27
VEGFA-208ENST00000417285 BCL11BQ9C0K0 894 aaPredicted RBP35.45■■■■□ 3.27
VEGFA-208ENST00000417285 BCL9O00512 1426 aa35.43■■■■□ 3.26
VEGFA-208ENST00000417285 PLSCR1O15162 318 aa35.42■■■■□ 3.26
VEGFA-208ENST00000417285 ANKRD24Q8TF21 1146 aa35.42■■■■□ 3.26
VEGFA-208ENST00000417285 IP6K1Q92551 441 aa35.42■■■■□ 3.26
VEGFA-208ENST00000417285 RGPD5Q99666 1765 aa35.41■■■■□ 3.26
VEGFA-208ENST00000417285 ANKRD36BQ8N2N9 1353 aa35.41■■■■□ 3.26
VEGFA-208ENST00000417285 LRRC37A3O60309 1634 aa35.39■■■■□ 3.26
VEGFA-208ENST00000417285 PEAK1Q9H792 1746 aa35.37■■■■□ 3.25
VEGFA-208ENST00000417285 IL2RBP14784 551 aa35.36■■■■□ 3.25
VEGFA-208ENST00000417285 LRP5O75197 1615 aa35.32■■■■□ 3.25
VEGFA-208ENST00000417285 FYB1O15117 783 aa35.31■■■■□ 3.24
VEGFA-208ENST00000417285 AMPHP49418 695 aa35.3■■■■□ 3.24
VEGFA-208ENST00000417285 WNK3Q9BYP7 1800 aa35.29■■■■□ 3.24
VEGFA-208ENST00000417285 LTN1O94822 1766 aa35.29■■■■□ 3.24
VEGFA-208ENST00000417285 PTF1AQ7RTS3 328 aa35.29■■■■□ 3.24
VEGFA-208ENST00000417285 CCER1Q8TC90 406 aaPredicted RBP35.29■■■■□ 3.24
VEGFA-208ENST00000417285 TNS2Q63HR2 1409 aa35.29■■■■□ 3.24
VEGFA-208ENST00000417285 MAP3K19Q56UN5 1328 aa35.29■■■■□ 3.24
VEGFA-208ENST00000417285 HOXC9P31274 260 aa35.27■■■■□ 3.24
VEGFA-208ENST00000417285 LTV1Q96GA3 475 aaPredicted RBP35.26■■■■□ 3.24
VEGFA-208ENST00000417285 RREB1Q92766 1687 aa35.26■■■■□ 3.23
VEGFA-208ENST00000417285 SBF2Q86WG5 1849 aa35.25■■■■□ 3.23
VEGFA-208ENST00000417285 GGNBP2Q9H3C7 697 aa35.24■■■■□ 3.23
VEGFA-208ENST00000417285 FBLN1P23142 703 aa35.23■■■■□ 3.23
VEGFA-208ENST00000417285 PROM2Q8N271 834 aa35.22■■■■□ 3.23
VEGFA-208ENST00000417285 NUP188Q5SRE5 1749 aa35.2■■■■□ 3.23
VEGFA-208ENST00000417285 KCNQ2O43526 872 aa35.19■■■■□ 3.22
VEGFA-208ENST00000417285 RGPD3A6NKT7 1758 aaPredicted RBP35.18■■■■□ 3.22
VEGFA-208ENST00000417285 RGPD4Q7Z3J3 1758 aa35.18■■■■□ 3.22
VEGFA-208ENST00000417285 RTL1A6NKG5 1358 aa35.18■■■■□ 3.22
VEGFA-208ENST00000417285 TXNRD1Q16881 649 aa35.17■■■■□ 3.22
VEGFA-208ENST00000417285 RRS1Q15050 365 aaKnown RBP35.16■■■■□ 3.22
VEGFA-208ENST00000417285 ACSBG1Q96GR2 724 aa35.15■■■■□ 3.22
VEGFA-208ENST00000417285 CARD14Q9BXL6 1004 aa35.15■■■■□ 3.22
VEGFA-208ENST00000417285 DDX54Q8TDD1 881 aaKnown RBP35.13■■■■□ 3.21
VEGFA-208ENST00000417285 SPON1Q9HCB6 807 aa35.13■■■■□ 3.21
VEGFA-208ENST00000417285 KIF24Q5T7B8 1368 aa35.1■■■■□ 3.21
VEGFA-208ENST00000417285 FAM208AQ9UK61 1670 aaKnown RBP35.09■■■■□ 3.21
VEGFA-208ENST00000417285 ANO8Q9HCE9 1232 aaPredicted RBP35.09■■■■□ 3.21
VEGFA-208ENST00000417285 EIF4G2P78344 907 aaKnown RBP eCLIP35.08■■■■□ 3.21
VEGFA-208ENST00000417285 NBPF6Q5VWK0 638 aa35.08■■■■□ 3.21
VEGFA-208ENST00000417285 ZCRB1Q8TBF4 217 aaKnown RBP35.08■■■■□ 3.21
VEGFA-208ENST00000417285 NBPF4Q96M43 638 aa35.08■■■■□ 3.21
VEGFA-208ENST00000417285 STK32BQ9NY57 414 aa35.08■■■■□ 3.21
VEGFA-208ENST00000417285 SMG6Q86US8 1419 aaKnown RBP35.06■■■■□ 3.2
VEGFA-208ENST00000417285 CGNL1Q0VF96 1302 aa35.06■■■■□ 3.2
VEGFA-208ENST00000417285 INSRP06213 1382 aa35.05■■■■□ 3.2
VEGFA-208ENST00000417285 NSD3Q9BZ95 1437 aa35.05■■■■□ 3.2
VEGFA-208ENST00000417285 HSP90AB2PQ58FF8 381 aa35.04■■■■□ 3.2
VEGFA-208ENST00000417285 FLT4P35916 1363 aa35.03■■■■□ 3.2
VEGFA-208ENST00000417285 SLC15A2Q16348 729 aa35.03■■■■□ 3.2
VEGFA-208ENST00000417285 MYOM1P52179 1685 aa35.02■■■■□ 3.2
VEGFA-208ENST00000417285 NHSQ6T4R5 1651 aa35.02■■■■□ 3.2
VEGFA-208ENST00000417285 RAPGEF4Q8WZA2 1011 aa35.02■■■■□ 3.2
VEGFA-208ENST00000417285 PPP1R1BQ9UD71 204 aaPredicted RBP35.01■■■■□ 3.2
VEGFA-208ENST00000417285 HSPA5P11021 654 aaKnown RBP34.99■■■■□ 3.19
VEGFA-208ENST00000417285 POLR3GLQ9BT43 218 aa34.99■■■■□ 3.19
VEGFA-208ENST00000417285 KIF20BQ96Q89 1820 aa34.97■■■■□ 3.19
VEGFA-208ENST00000417285 TATP17735 454 aaPredicted RBP34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms