RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 BCL9O00512 1426 aa13.06□□□□□ -0.32
SMIM12-201ENST00000417239 MPHOSPH9Q99550 1183 aa13.06□□□□□ -0.32
SMIM12-201ENST00000417239 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
SMIM12-201ENST00000417239 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
SMIM12-201ENST00000417239 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
SMIM12-201ENST00000417239 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
SMIM12-201ENST00000417239 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
SMIM12-201ENST00000417239 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
SMIM12-201ENST00000417239 BTAF1O14981 1849 aa13.04□□□□□ -0.32
SMIM12-201ENST00000417239 SLIT3O75094 1523 aa13.03□□□□□ -0.32
SMIM12-201ENST00000417239 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
SMIM12-201ENST00000417239 DDB1Q16531 1140 aa13.02□□□□□ -0.33
SMIM12-201ENST00000417239 ACEP12821 1306 aa13.02□□□□□ -0.33
SMIM12-201ENST00000417239 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
SMIM12-201ENST00000417239 GCP02774 474 aa13.01□□□□□ -0.33
SMIM12-201ENST00000417239 TXNRD1Q16881 649 aa13.01□□□□□ -0.33
SMIM12-201ENST00000417239 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
SMIM12-201ENST00000417239 MARCH10Q8NA82 808 aaPredicted RBP13.01□□□□□ -0.33
SMIM12-201ENST00000417239 ARXQ96QS3 562 aa13.01□□□□□ -0.33
SMIM12-201ENST00000417239 TRPM1Q7Z4N2 1603 aa13□□□□□ -0.33
SMIM12-201ENST00000417239 QRICH2Q9H0J4 1663 aa12.99□□□□□ -0.33
SMIM12-201ENST00000417239 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
SMIM12-201ENST00000417239 GPR162Q16538 588 aa12.97□□□□□ -0.33
SMIM12-201ENST00000417239 NLRP13Q86W25 1043 aa12.97□□□□□ -0.33
SMIM12-201ENST00000417239 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
SMIM12-201ENST00000417239 ABCC6O95255 1503 aa12.97□□□□□ -0.33
SMIM12-201ENST00000417239 KIAA1210Q9ULL0 1709 aa12.96□□□□□ -0.33
SMIM12-201ENST00000417239 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
SMIM12-201ENST00000417239 TOM1L2Q6ZVM7 507 aa12.96□□□□□ -0.33
SMIM12-201ENST00000417239 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
SMIM12-201ENST00000417239 TNS2Q63HR2 1409 aa12.96□□□□□ -0.34
SMIM12-201ENST00000417239 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
SMIM12-201ENST00000417239 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
SMIM12-201ENST00000417239 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
SMIM12-201ENST00000417239 BRD4O60885 1362 aaPredicted RBP12.94□□□□□ -0.34
SMIM12-201ENST00000417239 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
SMIM12-201ENST00000417239 LY75O60449 1722 aa12.92□□□□□ -0.34
SMIM12-201ENST00000417239 USP6P35125 1406 aa12.92□□□□□ -0.34
SMIM12-201ENST00000417239 ZNF827Q17R98 1081 aa12.92□□□□□ -0.34
SMIM12-201ENST00000417239 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
SMIM12-201ENST00000417239 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
SMIM12-201ENST00000417239 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
SMIM12-201ENST00000417239 LTN1O94822 1766 aa12.9□□□□□ -0.34
SMIM12-201ENST00000417239 NFAT5O94916 1531 aa12.9□□□□□ -0.34
SMIM12-201ENST00000417239 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
SMIM12-201ENST00000417239 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
SMIM12-201ENST00000417239 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
SMIM12-201ENST00000417239 CARD10Q9BWT7 1032 aa12.9□□□□□ -0.34
SMIM12-201ENST00000417239 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
SMIM12-201ENST00000417239 KLHL34Q8N239 644 aa12.89□□□□□ -0.35
SMIM12-201ENST00000417239 EXOC5O00471 708 aa12.88□□□□□ -0.35
SMIM12-201ENST00000417239 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMIM12-201ENST00000417239 HSPA6P17066 643 aa12.88□□□□□ -0.35
SMIM12-201ENST00000417239 NLRP6P59044 892 aa12.88□□□□□ -0.35
SMIM12-201ENST00000417239 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
SMIM12-201ENST00000417239 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
SMIM12-201ENST00000417239 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
SMIM12-201ENST00000417239 ADCY9O60503 1353 aa12.87□□□□□ -0.35
SMIM12-201ENST00000417239 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
SMIM12-201ENST00000417239 SLC16A10Q8TF71 515 aa12.87□□□□□ -0.35
SMIM12-201ENST00000417239 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
SMIM12-201ENST00000417239 POLD1P28340 1107 aa12.86□□□□□ -0.35
SMIM12-201ENST00000417239 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
SMIM12-201ENST00000417239 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
SMIM12-201ENST00000417239 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
SMIM12-201ENST00000417239 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
SMIM12-201ENST00000417239 MON2Q7Z3U7 1717 aa12.85□□□□□ -0.35
SMIM12-201ENST00000417239 GRIN3BO60391 1043 aa12.84□□□□□ -0.35
SMIM12-201ENST00000417239 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
SMIM12-201ENST00000417239 CSB-PGBD3P0DP91 1061 aa12.83□□□□□ -0.36
SMIM12-201ENST00000417239 C5P01031 1676 aa12.83□□□□□ -0.36
SMIM12-201ENST00000417239 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
SMIM12-201ENST00000417239 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
SMIM12-201ENST00000417239 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
SMIM12-201ENST00000417239 TAF1LQ8IZX4 1826 aa12.82□□□□□ -0.36
SMIM12-201ENST00000417239 SLC27A3Q5K4L6 730 aa12.81□□□□□ -0.36
SMIM12-201ENST00000417239 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
SMIM12-201ENST00000417239 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
SMIM12-201ENST00000417239 WDR90Q96KV7 1748 aa12.81□□□□□ -0.36
SMIM12-201ENST00000417239 PCNTO95613 3336 aa12.81□□□□□ -0.36
SMIM12-201ENST00000417239 SOX12O15370 315 aa12.79□□□□□ -0.36
SMIM12-201ENST00000417239 ERBB3P21860 1342 aa12.79□□□□□ -0.36
SMIM12-201ENST00000417239 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
SMIM12-201ENST00000417239 CICQ96RK0 1608 aaPredicted RBP12.78□□□□□ -0.36
SMIM12-201ENST00000417239 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
SMIM12-201ENST00000417239 TFCP2L1Q9NZI6 479 aa12.78□□□□□ -0.36
SMIM12-201ENST00000417239 RAB3GAP2Q9H2M9 1393 aa12.78□□□□□ -0.36
SMIM12-201ENST00000417239 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.36
SMIM12-201ENST00000417239 IL2RBP14784 551 aa12.77□□□□□ -0.37
SMIM12-201ENST00000417239 TTC21BQ7Z4L5 1316 aa12.77□□□□□ -0.37
SMIM12-201ENST00000417239 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
SMIM12-201ENST00000417239 KCNQ4P56696 695 aa12.76□□□□□ -0.37
SMIM12-201ENST00000417239 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
SMIM12-201ENST00000417239 NSD2O96028 1365 aa12.76□□□□□ -0.37
SMIM12-201ENST00000417239 KIF3CO14782 793 aa12.75□□□□□ -0.37
SMIM12-201ENST00000417239 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
SMIM12-201ENST00000417239 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
SMIM12-201ENST00000417239 NLRP2Q9NX02 1062 aa12.74□□□□□ -0.37
SMIM12-201ENST00000417239 UBR3Q6ZT12 1888 aa12.74□□□□□ -0.37
SMIM12-201ENST00000417239 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms