RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 RGPD5Q99666 1765 aa21.88■■□□□ 1.09
ITGB1-204ENST00000417122 AXIN2Q9Y2T1 843 aa21.87■■□□□ 1.09
ITGB1-204ENST00000417122 CRB1P82279 1406 aa21.87■■□□□ 1.09
ITGB1-204ENST00000417122 CDCA8Q53HL2 280 aa21.86■■□□□ 1.09
ITGB1-204ENST00000417122 THRAP3Q9Y2W1 955 aaKnown RBP21.86■■□□□ 1.09
ITGB1-204ENST00000417122 SF3B2Q13435 895 aaKnown RBP21.85■■□□□ 1.09
ITGB1-204ENST00000417122 ANKRD36BQ8N2N9 1353 aa21.85■■□□□ 1.09
ITGB1-204ENST00000417122 FAM182BQ5T319 152 aa21.84■■□□□ 1.09
ITGB1-204ENST00000417122 TOM1L2Q6ZVM7 507 aa21.83■■□□□ 1.09
ITGB1-204ENST00000417122 WDR17Q8IZU2 1322 aa21.82■■□□□ 1.08
ITGB1-204ENST00000417122 OVOS2A0A0J9YW53 1432 aa21.82■■□□□ 1.08
ITGB1-204ENST00000417122 OVOS2Q6IE36 1432 aa21.82■■□□□ 1.08
ITGB1-204ENST00000417122 LTN1O94822 1766 aa21.82■■□□□ 1.08
ITGB1-204ENST00000417122 ABCC6O95255 1503 aa21.82■■□□□ 1.08
ITGB1-204ENST00000417122 PARP4Q9UKK3 1724 aaKnown RBP21.8■■□□□ 1.08
ITGB1-204ENST00000417122 PDE3BQ13370 1112 aa21.8■■□□□ 1.08
ITGB1-204ENST00000417122 CSB-PGBD3P0DP91 1061 aa21.79■■□□□ 1.08
ITGB1-204ENST00000417122 DEFB132Q7Z7B7 95 aa21.79■■□□□ 1.08
ITGB1-204ENST00000417122 RGPD1P0DJD0 1748 aa21.79■■□□□ 1.08
ITGB1-204ENST00000417122 COG3Q96JB2 828 aa21.78■■□□□ 1.08
ITGB1-204ENST00000417122 MYOM1P52179 1685 aa21.78■■□□□ 1.08
ITGB1-204ENST00000417122 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
ITGB1-204ENST00000417122 WNK3Q9BYP7 1800 aa21.77■■□□□ 1.08
ITGB1-204ENST00000417122 EIF4G2P78344 907 aaKnown RBP eCLIP21.76■■□□□ 1.07
ITGB1-204ENST00000417122 CARD10Q9BWT7 1032 aa21.75■■□□□ 1.07
ITGB1-204ENST00000417122 LRRC37A3O60309 1634 aa21.74■■□□□ 1.07
ITGB1-204ENST00000417122 BAG6P46379 1132 aa21.74■■□□□ 1.07
ITGB1-204ENST00000417122 TNS1Q9HBL0 1735 aaKnown RBP21.73■■□□□ 1.07
ITGB1-204ENST00000417122 FYB1O15117 783 aa21.73■■□□□ 1.07
ITGB1-204ENST00000417122 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
ITGB1-204ENST00000417122 ERBB3P21860 1342 aa21.73■■□□□ 1.07
ITGB1-204ENST00000417122 KIF20BQ96Q89 1820 aa21.72■■□□□ 1.07
ITGB1-204ENST00000417122 DDB1Q16531 1140 aa21.72■■□□□ 1.07
ITGB1-204ENST00000417122 CDCA7Q9BWT1 371 aaPredicted RBP21.72■■□□□ 1.07
ITGB1-204ENST00000417122 CCDC7Q96M83 1385 aa21.72■■□□□ 1.07
ITGB1-204ENST00000417122 TRIM37O94972 964 aa21.71■■□□□ 1.07
ITGB1-204ENST00000417122 GGNBP2Q9H3C7 697 aa21.71■■□□□ 1.07
ITGB1-204ENST00000417122 ANKRD24Q8TF21 1146 aa21.7■■□□□ 1.06
ITGB1-204ENST00000417122 IP6K1Q92551 441 aa21.7■■□□□ 1.06
ITGB1-204ENST00000417122 POLR3GLQ9BT43 218 aa21.7■■□□□ 1.06
ITGB1-204ENST00000417122 FBLN1P23142 703 aa21.69■■□□□ 1.06
ITGB1-204ENST00000417122 NLRP2Q9NX02 1062 aa21.69■■□□□ 1.06
ITGB1-204ENST00000417122 DISP2A7MBM2 1401 aa21.69■■□□□ 1.06
ITGB1-204ENST00000417122 C11orf95C9JLR9 678 aaPredicted RBP21.68■■□□□ 1.06
ITGB1-204ENST00000417122 EN1Q05925 392 aaPredicted RBP21.68■■□□□ 1.06
ITGB1-204ENST00000417122 CARD14Q9BXL6 1004 aa21.68■■□□□ 1.06
ITGB1-204ENST00000417122 PEAK1Q9H792 1746 aa21.67■■□□□ 1.06
ITGB1-204ENST00000417122 OVOS2A0A0G2JMS6 1433 aa21.67■■□□□ 1.06
ITGB1-204ENST00000417122 NSD3Q9BZ95 1437 aa21.67■■□□□ 1.06
ITGB1-204ENST00000417122 MAP3K19Q56UN5 1328 aa21.67■■□□□ 1.06
ITGB1-204ENST00000417122 AMPHP49418 695 aa21.66■■□□□ 1.06
ITGB1-204ENST00000417122 APBA3O96018 575 aa21.65■■□□□ 1.06
ITGB1-204ENST00000417122 HOXC9P31274 260 aa21.65■■□□□ 1.06
ITGB1-204ENST00000417122 FAM208AQ9UK61 1670 aaKnown RBP21.65■■□□□ 1.06
ITGB1-204ENST00000417122 EXOC5O00471 708 aa21.64■■□□□ 1.05
ITGB1-204ENST00000417122 RRS1Q15050 365 aaKnown RBP21.64■■□□□ 1.05
ITGB1-204ENST00000417122 LTV1Q96GA3 475 aaPredicted RBP21.64■■□□□ 1.05
ITGB1-204ENST00000417122 EZH2Q15910 746 aaKnown RBP21.63■■□□□ 1.05
ITGB1-204ENST00000417122 MARCH10Q8NA82 808 aaPredicted RBP21.63■■□□□ 1.05
ITGB1-204ENST00000417122 SBF2Q86WG5 1849 aa21.63■■□□□ 1.05
ITGB1-204ENST00000417122 RTL1A6NKG5 1358 aa21.62■■□□□ 1.05
ITGB1-204ENST00000417122 IL2RBP14784 551 aa21.62■■□□□ 1.05
ITGB1-204ENST00000417122 CAMKK2Q96RR4 588 aa21.61■■□□□ 1.05
ITGB1-204ENST00000417122 TNS2Q63HR2 1409 aa21.61■■□□□ 1.05
ITGB1-204ENST00000417122 CGNL1Q0VF96 1302 aa21.59■■□□□ 1.05
ITGB1-204ENST00000417122 RGPD2P0DJD1 1756 aa21.59■■□□□ 1.05
ITGB1-204ENST00000417122 BCL9O00512 1426 aa21.58■■□□□ 1.05
ITGB1-204ENST00000417122 PARD3Q8TEW0 1356 aa21.58■■□□□ 1.04
ITGB1-204ENST00000417122 PANK3Q9H999 370 aa21.56■■□□□ 1.04
ITGB1-204ENST00000417122 RREB1Q92766 1687 aa21.56■■□□□ 1.04
ITGB1-204ENST00000417122 BCL11BQ9C0K0 894 aaPredicted RBP21.55■■□□□ 1.04
ITGB1-204ENST00000417122 FLT4P35916 1363 aa21.55■■□□□ 1.04
ITGB1-204ENST00000417122 KIF24Q5T7B8 1368 aa21.55■■□□□ 1.04
ITGB1-204ENST00000417122 ANKRD26Q9UPS8 1709 aa21.54■■□□□ 1.04
ITGB1-204ENST00000417122 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
ITGB1-204ENST00000417122 INSRP06213 1382 aa21.53■■□□□ 1.04
ITGB1-204ENST00000417122 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
ITGB1-204ENST00000417122 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
ITGB1-204ENST00000417122 MAP2P11137 1827 aaKnown RBP21.52■■□□□ 1.04
ITGB1-204ENST00000417122 PSDA5PKW4 1024 aaPredicted RBP21.52■■□□□ 1.04
ITGB1-204ENST00000417122 PTF1AQ7RTS3 328 aa21.52■■□□□ 1.04
ITGB1-204ENST00000417122 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.03
ITGB1-204ENST00000417122 RGPD3A6NKT7 1758 aaPredicted RBP21.51■■□□□ 1.03
ITGB1-204ENST00000417122 RGPD4Q7Z3J3 1758 aa21.51■■□□□ 1.03
ITGB1-204ENST00000417122 PLSCR1O15162 318 aa21.51■■□□□ 1.03
ITGB1-204ENST00000417122 NBPF6Q5VWK0 638 aa21.51■■□□□ 1.03
ITGB1-204ENST00000417122 NBPF4Q96M43 638 aa21.51■■□□□ 1.03
ITGB1-204ENST00000417122 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
ITGB1-204ENST00000417122 R3HDM1Q15032 1099 aaKnown RBP21.49■■□□□ 1.03
ITGB1-204ENST00000417122 NHSQ6T4R5 1651 aa21.49■■□□□ 1.03
ITGB1-204ENST00000417122 USHBP1Q8N6Y0 703 aa21.48■■□□□ 1.03
ITGB1-204ENST00000417122 ACSBG1Q96GR2 724 aa21.48■■□□□ 1.03
ITGB1-204ENST00000417122 KIF7Q2M1P5 1343 aa21.48■■□□□ 1.03
ITGB1-204ENST00000417122 MEGF6O75095 1541 aa21.47■■□□□ 1.03
ITGB1-204ENST00000417122 KCNQ2O43526 872 aa21.47■■□□□ 1.03
ITGB1-204ENST00000417122 DDX54Q8TDD1 881 aaKnown RBP21.47■■□□□ 1.03
ITGB1-204ENST00000417122 TNNT2P45379 298 aaPredicted RBP21.46■■□□□ 1.03
ITGB1-204ENST00000417122 NBPF14Q5TI25 921 aa21.46■■□□□ 1.03
ITGB1-204ENST00000417122 POLKQ9UBT6 870 aa21.46■■□□□ 1.03
ITGB1-204ENST00000417122 NSD2O96028 1365 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms