RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
SEC22C-204ENST00000416880 MON2Q7Z3U7 1717 aa19.28■□□□□ 0.68
SEC22C-204ENST00000416880 EN1Q05925 392 aaPredicted RBP19.27■□□□□ 0.68
SEC22C-204ENST00000416880 CD163L1Q9NR16 1453 aa19.27■□□□□ 0.67
SEC22C-204ENST00000416880 TRIM37O94972 964 aa19.26■□□□□ 0.67
SEC22C-204ENST00000416880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.26■□□□□ 0.67
SEC22C-204ENST00000416880 CLSPNQ9HAW4 1339 aa19.25■□□□□ 0.67
SEC22C-204ENST00000416880 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
SEC22C-204ENST00000416880 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
SEC22C-204ENST00000416880 CARD10Q9BWT7 1032 aa19.25■□□□□ 0.67
SEC22C-204ENST00000416880 ABCC6O95255 1503 aa19.25■□□□□ 0.67
SEC22C-204ENST00000416880 PARP4Q9UKK3 1724 aaKnown RBP19.24■□□□□ 0.67
SEC22C-204ENST00000416880 SOX12O15370 315 aa19.23■□□□□ 0.67
SEC22C-204ENST00000416880 APBA3O96018 575 aa19.23■□□□□ 0.67
SEC22C-204ENST00000416880 DDB1Q16531 1140 aa19.23■□□□□ 0.67
SEC22C-204ENST00000416880 NME9Q86XW9 330 aa19.23■□□□□ 0.67
SEC22C-204ENST00000416880 CAMKK2Q96RR4 588 aa19.23■□□□□ 0.67
SEC22C-204ENST00000416880 NFAT5O94916 1531 aa19.23■□□□□ 0.67
SEC22C-204ENST00000416880 USP54Q70EL1 1684 aa19.23■□□□□ 0.67
SEC22C-204ENST00000416880 CSB-PGBD3P0DP91 1061 aa19.22■□□□□ 0.67
SEC22C-204ENST00000416880 TNS1Q9HBL0 1735 aaKnown RBP19.21■□□□□ 0.67
SEC22C-204ENST00000416880 A0A1W2PP64 1363 aa19.2■□□□□ 0.66
SEC22C-204ENST00000416880 CCDC7Q96M83 1385 aa19.2■□□□□ 0.66
SEC22C-204ENST00000416880 TMF1P82094 1093 aa19.2■□□□□ 0.66
SEC22C-204ENST00000416880 EZH2Q15910 746 aaKnown RBP19.2■□□□□ 0.66
SEC22C-204ENST00000416880 CDCA8Q53HL2 280 aa19.19■□□□□ 0.66
SEC22C-204ENST00000416880 OVOS2A0A0G2JMS6 1433 aa19.18■□□□□ 0.66
SEC22C-204ENST00000416880 OVOS2A0A0J9YW53 1432 aa19.18■□□□□ 0.66
SEC22C-204ENST00000416880 OVOS2Q6IE36 1432 aa19.18■□□□□ 0.66
SEC22C-204ENST00000416880 RGPD5Q99666 1765 aa19.18■□□□□ 0.66
SEC22C-204ENST00000416880 EXOC5O00471 708 aa19.17■□□□□ 0.66
SEC22C-204ENST00000416880 USP47Q96K76 1375 aa19.17■□□□□ 0.66
SEC22C-204ENST00000416880 BCL9O00512 1426 aa19.17■□□□□ 0.66
SEC22C-204ENST00000416880 SRCAPQ6ZRS2 3230 aa19.16■□□□□ 0.66
SEC22C-204ENST00000416880 COG3Q96JB2 828 aa19.15■□□□□ 0.66
SEC22C-204ENST00000416880 ERBB3P21860 1342 aa19.15■□□□□ 0.66
SEC22C-204ENST00000416880 PSDA5PKW4 1024 aaPredicted RBP19.14■□□□□ 0.65
SEC22C-204ENST00000416880 PLSCR1O15162 318 aa19.14■□□□□ 0.65
SEC22C-204ENST00000416880 NBPF14Q5TI25 921 aa19.14■□□□□ 0.65
SEC22C-204ENST00000416880 BCL11BQ9C0K0 894 aaPredicted RBP19.14■□□□□ 0.65
SEC22C-204ENST00000416880 ANKRD36BQ8N2N9 1353 aa19.14■□□□□ 0.65
SEC22C-204ENST00000416880 MARCH10Q8NA82 808 aaPredicted RBP19.13■□□□□ 0.65
SEC22C-204ENST00000416880 IP6K1Q92551 441 aa19.13■□□□□ 0.65
SEC22C-204ENST00000416880 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
SEC22C-204ENST00000416880 NLRP2Q9NX02 1062 aa19.13■□□□□ 0.65
SEC22C-204ENST00000416880 LRRC37A3O60309 1634 aa19.13■□□□□ 0.65
SEC22C-204ENST00000416880 PEAK1Q9H792 1746 aa19.13■□□□□ 0.65
SEC22C-204ENST00000416880 WNK3Q9BYP7 1800 aa19.12■□□□□ 0.65
SEC22C-204ENST00000416880 R3HDM1Q15032 1099 aaKnown RBP19.12■□□□□ 0.65
SEC22C-204ENST00000416880 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
SEC22C-204ENST00000416880 LTN1O94822 1766 aa19.11■□□□□ 0.65
SEC22C-204ENST00000416880 LRP5O75197 1615 aa19.11■□□□□ 0.65
SEC22C-204ENST00000416880 SBF2Q86WG5 1849 aa19.09■□□□□ 0.65
SEC22C-204ENST00000416880 IL2RBP14784 551 aa19.09■□□□□ 0.65
SEC22C-204ENST00000416880 RREB1Q92766 1687 aa19.08■□□□□ 0.64
SEC22C-204ENST00000416880 FYB1O15117 783 aa19.07■□□□□ 0.64
SEC22C-204ENST00000416880 TNS2Q63HR2 1409 aa19.07■□□□□ 0.64
SEC22C-204ENST00000416880 RGPD3A6NKT7 1758 aaPredicted RBP19.06■□□□□ 0.64
SEC22C-204ENST00000416880 RGPD4Q7Z3J3 1758 aa19.06■□□□□ 0.64
SEC22C-204ENST00000416880 AMPHP49418 695 aa19.06■□□□□ 0.64
SEC22C-204ENST00000416880 MAP3K19Q56UN5 1328 aa19.05■□□□□ 0.64
SEC22C-204ENST00000416880 HOXC9P31274 260 aa19.04■□□□□ 0.64
SEC22C-204ENST00000416880 NUP188Q5SRE5 1749 aa19.03■□□□□ 0.64
SEC22C-204ENST00000416880 FAM208AQ9UK61 1670 aaKnown RBP19.02■□□□□ 0.64
SEC22C-204ENST00000416880 GGNBP2Q9H3C7 697 aa19.02■□□□□ 0.64
SEC22C-204ENST00000416880 RTL1A6NKG5 1358 aa19.02■□□□□ 0.64
SEC22C-204ENST00000416880 PTF1AQ7RTS3 328 aa19■□□□□ 0.63
SEC22C-204ENST00000416880 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
SEC22C-204ENST00000416880 KIF24Q5T7B8 1368 aa18.99■□□□□ 0.63
SEC22C-204ENST00000416880 PROM2Q8N271 834 aa18.99■□□□□ 0.63
SEC22C-204ENST00000416880 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
SEC22C-204ENST00000416880 FBLN1P23142 703 aa18.98■□□□□ 0.63
SEC22C-204ENST00000416880 CARD14Q9BXL6 1004 aa18.98■□□□□ 0.63
SEC22C-204ENST00000416880 KCNQ2O43526 872 aa18.97■□□□□ 0.63
SEC22C-204ENST00000416880 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
SEC22C-204ENST00000416880 TXNRD1Q16881 649 aa18.97■□□□□ 0.63
SEC22C-204ENST00000416880 CGNL1Q0VF96 1302 aa18.97■□□□□ 0.63
SEC22C-204ENST00000416880 RRS1Q15050 365 aaKnown RBP18.96■□□□□ 0.63
SEC22C-204ENST00000416880 SPON1Q9HCB6 807 aa18.96■□□□□ 0.63
SEC22C-204ENST00000416880 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
SEC22C-204ENST00000416880 NHSQ6T4R5 1651 aa18.95■□□□□ 0.62
SEC22C-204ENST00000416880 INSRP06213 1382 aa18.94■□□□□ 0.62
SEC22C-204ENST00000416880 ZCRB1Q8TBF4 217 aaKnown RBP18.94■□□□□ 0.62
SEC22C-204ENST00000416880 DDX54Q8TDD1 881 aaKnown RBP18.94■□□□□ 0.62
SEC22C-204ENST00000416880 ACSBG1Q96GR2 724 aa18.94■□□□□ 0.62
SEC22C-204ENST00000416880 KIF20BQ96Q89 1820 aa18.94■□□□□ 0.62
SEC22C-204ENST00000416880 FLT4P35916 1363 aa18.93■□□□□ 0.62
SEC22C-204ENST00000416880 NSD3Q9BZ95 1437 aa18.93■□□□□ 0.62
SEC22C-204ENST00000416880 NBPF6Q5VWK0 638 aa18.93■□□□□ 0.62
SEC22C-204ENST00000416880 NBPF4Q96M43 638 aa18.93■□□□□ 0.62
SEC22C-204ENST00000416880 STK32BQ9NY57 414 aa18.93■□□□□ 0.62
SEC22C-204ENST00000416880 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
SEC22C-204ENST00000416880 MYOM1P52179 1685 aa18.92■□□□□ 0.62
SEC22C-204ENST00000416880 SLC15A2Q16348 729 aa18.91■□□□□ 0.62
SEC22C-204ENST00000416880 HSP90AB2PQ58FF8 381 aa18.91■□□□□ 0.62
SEC22C-204ENST00000416880 RAPGEF4Q8WZA2 1011 aa18.91■□□□□ 0.62
SEC22C-204ENST00000416880 ANO8Q9HCE9 1232 aaPredicted RBP18.91■□□□□ 0.62
SEC22C-204ENST00000416880 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
SEC22C-204ENST00000416880 TATP17735 454 aaPredicted RBP18.89■□□□□ 0.61
SEC22C-204ENST00000416880 SLC27A3Q5K4L6 730 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms