RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 SLIT3O75094 1523 aa14.46□□□□□ -0.09
MDC1-202ENST00000416571 WNK3Q9BYP7 1800 aa14.46□□□□□ -0.09
MDC1-202ENST00000416571 AKAP12Q02952 1782 aa14.46□□□□□ -0.09
MDC1-202ENST00000416571 PIK3C2AO00443 1686 aa14.45□□□□□ -0.1
MDC1-202ENST00000416571 NINLQ9Y2I6 1382 aa14.45□□□□□ -0.1
MDC1-202ENST00000416571 PLSCR1O15162 318 aa14.44□□□□□ -0.1
MDC1-202ENST00000416571 EVC2Q86UK5 1308 aa14.43□□□□□ -0.1
MDC1-202ENST00000416571 WDR17Q8IZU2 1322 aa14.43□□□□□ -0.1
MDC1-202ENST00000416571 CSB-PGBD3P0DP91 1061 aa14.43□□□□□ -0.1
MDC1-202ENST00000416571 CDCA7Q9BWT1 371 aaPredicted RBP14.43□□□□□ -0.1
MDC1-202ENST00000416571 BCL11BQ9C0K0 894 aaPredicted RBP14.43□□□□□ -0.1
MDC1-202ENST00000416571 COL18A1P39060 1754 aa14.42□□□□□ -0.1
MDC1-202ENST00000416571 CPSF1Q10570 1443 aaKnown RBP14.42□□□□□ -0.1
MDC1-202ENST00000416571 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
MDC1-202ENST00000416571 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
MDC1-202ENST00000416571 SOX12O15370 315 aa14.41□□□□□ -0.1
MDC1-202ENST00000416571 RGPD5Q99666 1765 aa14.41□□□□□ -0.1
MDC1-202ENST00000416571 UTRNP46939 3433 aa14.41□□□□□ -0.1
MDC1-202ENST00000416571 CASZ1Q86V15 1759 aa14.4□□□□□ -0.1
MDC1-202ENST00000416571 ZNF692Q9BU19 519 aaPredicted RBP14.4□□□□□ -0.1
MDC1-202ENST00000416571 ANO8Q9HCE9 1232 aaPredicted RBP14.4□□□□□ -0.1
MDC1-202ENST00000416571 MARCH10Q8NA82 808 aaPredicted RBP14.39□□□□□ -0.11
MDC1-202ENST00000416571 AXIN2Q9Y2T1 843 aa14.39□□□□□ -0.11
MDC1-202ENST00000416571 TTC21BQ7Z4L5 1316 aa14.39□□□□□ -0.11
MDC1-202ENST00000416571 EXOC5O00471 708 aa14.38□□□□□ -0.11
MDC1-202ENST00000416571 PTF1AQ7RTS3 328 aa14.38□□□□□ -0.11
MDC1-202ENST00000416571 ARHGEF25Q86VW2 580 aa14.38□□□□□ -0.11
MDC1-202ENST00000416571 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
MDC1-202ENST00000416571 TTC21AQ8NDW8 1320 aa14.38□□□□□ -0.11
MDC1-202ENST00000416571 ZBTB7AO95365 584 aa14.37□□□□□ -0.11
MDC1-202ENST00000416571 CARD10Q9BWT7 1032 aa14.37□□□□□ -0.11
MDC1-202ENST00000416571 BCL9O00512 1426 aa14.37□□□□□ -0.11
MDC1-202ENST00000416571 CCDC7Q96M83 1385 aa14.36□□□□□ -0.11
MDC1-202ENST00000416571 TXNRD1Q16881 649 aa14.36□□□□□ -0.11
MDC1-202ENST00000416571 L3MBTL2Q969R5 705 aa14.36□□□□□ -0.11
MDC1-202ENST00000416571 MYOM1P52179 1685 aa14.36□□□□□ -0.11
MDC1-202ENST00000416571 ROCK2O75116 1388 aaKnown RBP14.35□□□□□ -0.11
MDC1-202ENST00000416571 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
MDC1-202ENST00000416571 ABCC6O95255 1503 aa14.35□□□□□ -0.11
MDC1-202ENST00000416571 TNS2Q63HR2 1409 aa14.34□□□□□ -0.11
MDC1-202ENST00000416571 PROM2Q8N271 834 aa14.34□□□□□ -0.11
MDC1-202ENST00000416571 PDGFDQ9GZP0 370 aaPredicted RBP14.34□□□□□ -0.11
MDC1-202ENST00000416571 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
MDC1-202ENST00000416571 NFAT5O94916 1531 aa14.34□□□□□ -0.11
MDC1-202ENST00000416571 NHSQ6T4R5 1651 aa14.33□□□□□ -0.11
MDC1-202ENST00000416571 MON2Q7Z3U7 1717 aa14.33□□□□□ -0.12
MDC1-202ENST00000416571 SLC15A2Q16348 729 aa14.33□□□□□ -0.12
MDC1-202ENST00000416571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.31□□□□□ -0.12
MDC1-202ENST00000416571 MTFR1LQ9H019 292 aa14.31□□□□□ -0.12
MDC1-202ENST00000416571 NLRP2Q9NX02 1062 aa14.31□□□□□ -0.12
MDC1-202ENST00000416571 LTN1O94822 1766 aa14.31□□□□□ -0.12
MDC1-202ENST00000416571 PTGER2P43116 358 aa14.3□□□□□ -0.12
MDC1-202ENST00000416571 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
MDC1-202ENST00000416571 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
MDC1-202ENST00000416571 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
MDC1-202ENST00000416571 ERBB3P21860 1342 aa14.29□□□□□ -0.12
MDC1-202ENST00000416571 USP54Q70EL1 1684 aa14.29□□□□□ -0.12
MDC1-202ENST00000416571 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
MDC1-202ENST00000416571 SLC34A2O95436 690 aa14.28□□□□□ -0.12
MDC1-202ENST00000416571 IL2RBP14784 551 aa14.28□□□□□ -0.12
MDC1-202ENST00000416571 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
MDC1-202ENST00000416571 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
MDC1-202ENST00000416571 BTAF1O14981 1849 aa14.27□□□□□ -0.12
MDC1-202ENST00000416571 USP31Q70CQ4 1352 aa14.27□□□□□ -0.12
MDC1-202ENST00000416571 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.13
MDC1-202ENST00000416571 TMC1Q8TDI8 760 aa14.27□□□□□ -0.13
MDC1-202ENST00000416571 CHD4Q14839 1912 aa14.26□□□□□ -0.13
MDC1-202ENST00000416571 NME9Q86XW9 330 aa14.26□□□□□ -0.13
MDC1-202ENST00000416571 SBNO2Q9Y2G9 1366 aa14.25□□□□□ -0.13
MDC1-202ENST00000416571 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
MDC1-202ENST00000416571 ARXQ96QS3 562 aa14.25□□□□□ -0.13
MDC1-202ENST00000416571 PAPPAQ13219 1627 aa14.25□□□□□ -0.13
MDC1-202ENST00000416571 SGIP1Q9BQI5 828 aa14.23□□□□□ -0.13
MDC1-202ENST00000416571 CARD11Q9BXL7 1154 aa14.23□□□□□ -0.13
MDC1-202ENST00000416571 TERF2IPQ9NYB0 399 aa14.23□□□□□ -0.13
MDC1-202ENST00000416571 CD163L1Q9NR16 1453 aa14.23□□□□□ -0.13
MDC1-202ENST00000416571 FAM208AQ9UK61 1670 aaKnown RBP14.23□□□□□ -0.13
MDC1-202ENST00000416571 EDC4Q6P2E9 1401 aaKnown RBP14.23□□□□□ -0.13
MDC1-202ENST00000416571 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
MDC1-202ENST00000416571 GIGYF1O75420 1035 aaPredicted RBP14.21□□□□□ -0.13
MDC1-202ENST00000416571 ZNF827Q17R98 1081 aa14.21□□□□□ -0.13
MDC1-202ENST00000416571 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.13
MDC1-202ENST00000416571 SLC12A5Q9H2X9 1139 aa14.21□□□□□ -0.13
MDC1-202ENST00000416571 MAP3K5Q99683 1374 aa14.21□□□□□ -0.14
MDC1-202ENST00000416571 POLD1P28340 1107 aa14.2□□□□□ -0.14
MDC1-202ENST00000416571 GPR162Q16538 588 aa14.2□□□□□ -0.14
MDC1-202ENST00000416571 SYTL4Q96C24 671 aaPredicted RBP14.2□□□□□ -0.14
MDC1-202ENST00000416571 LTV1Q96GA3 475 aaPredicted RBP14.2□□□□□ -0.14
MDC1-202ENST00000416571 QSER1Q2KHR3 1735 aa14.2□□□□□ -0.14
MDC1-202ENST00000416571 A0A1W2PP64 1363 aa14.2□□□□□ -0.14
MDC1-202ENST00000416571 SLC27A3Q5K4L6 730 aa14.19□□□□□ -0.14
MDC1-202ENST00000416571 SLC16A10Q8TF71 515 aa14.19□□□□□ -0.14
MDC1-202ENST00000416571 LRRC4BQ9NT99 713 aa14.19□□□□□ -0.14
MDC1-202ENST00000416571 IP6K1Q92551 441 aa14.18□□□□□ -0.14
MDC1-202ENST00000416571 DOT1LQ8TEK3 1739 aa14.18□□□□□ -0.14
MDC1-202ENST00000416571 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
MDC1-202ENST00000416571 TFCP2L1Q9NZI6 479 aa14.17□□□□□ -0.14
MDC1-202ENST00000416571 AMPHP49418 695 aa14.16□□□□□ -0.14
MDC1-202ENST00000416571 AKT1S1Q96B36 256 aa14.16□□□□□ -0.14
MDC1-202ENST00000416571 COG3Q96JB2 828 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms