RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MYOM1P52179 1685 aa21.43■■□□□ 1.02
UBXN4-203ENST00000416538 ST20-MTHFSA0A0A6YYL1 179 aa21.42■■□□□ 1.02
UBXN4-203ENST00000416538 SOX12O15370 315 aa21.42■■□□□ 1.02
UBXN4-203ENST00000416538 USP31Q70CQ4 1352 aa21.42■■□□□ 1.02
UBXN4-203ENST00000416538 ARHGEF25Q86VW2 580 aa21.42■■□□□ 1.02
UBXN4-203ENST00000416538 TCP11L2Q8N4U5 519 aa21.42■■□□□ 1.02
UBXN4-203ENST00000416538 OVOS2A0A0J9YW53 1432 aa21.41■■□□□ 1.02
UBXN4-203ENST00000416538 OVOS2Q6IE36 1432 aa21.41■■□□□ 1.02
UBXN4-203ENST00000416538 EDC4Q6P2E9 1401 aaKnown RBP21.41■■□□□ 1.02
UBXN4-203ENST00000416538 NME9Q86XW9 330 aa21.41■■□□□ 1.02
UBXN4-203ENST00000416538 NUP188Q5SRE5 1749 aa21.41■■□□□ 1.02
UBXN4-203ENST00000416538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
UBXN4-203ENST00000416538 USP47Q96K76 1375 aa21.39■■□□□ 1.02
UBXN4-203ENST00000416538 SF3B2Q13435 895 aaKnown RBP21.39■■□□□ 1.01
UBXN4-203ENST00000416538 TMC1Q8TDI8 760 aa21.39■■□□□ 1.01
UBXN4-203ENST00000416538 SRCAPQ6ZRS2 3230 aa21.38■■□□□ 1.01
UBXN4-203ENST00000416538 WDR17Q8IZU2 1322 aa21.37■■□□□ 1.01
UBXN4-203ENST00000416538 KCNH5Q8NCM2 988 aa21.36■■□□□ 1.01
UBXN4-203ENST00000416538 THRAP3Q9Y2W1 955 aaKnown RBP21.36■■□□□ 1.01
UBXN4-203ENST00000416538 KIF20BQ96Q89 1820 aa21.35■■□□□ 1.01
UBXN4-203ENST00000416538 BAG6P46379 1132 aa21.35■■□□□ 1.01
UBXN4-203ENST00000416538 EN1Q05925 392 aaPredicted RBP21.35■■□□□ 1.01
UBXN4-203ENST00000416538 PUS7Q96PZ0 661 aaKnown RBP21.35■■□□□ 1.01
UBXN4-203ENST00000416538 LRP5O75197 1615 aa21.35■■□□□ 1.01
UBXN4-203ENST00000416538 TRIM37O94972 964 aa21.34■■□□□ 1.01
UBXN4-203ENST00000416538 RGPD2P0DJD1 1756 aa21.33■■□□□ 1.01
UBXN4-203ENST00000416538 PPP4R3CPQ6ZMV5 832 aa21.33■■□□□ 1.01
UBXN4-203ENST00000416538 FAM196AQ6ZSG2 479 aa21.33■■□□□ 1.01
UBXN4-203ENST00000416538 HDGFL2Q7Z4V5 671 aaPredicted RBP21.33■■□□□ 1.01
UBXN4-203ENST00000416538 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
UBXN4-203ENST00000416538 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1
UBXN4-203ENST00000416538 RGPD4Q7Z3J3 1758 aa21.33■■□□□ 1
UBXN4-203ENST00000416538 TOM1L2Q6ZVM7 507 aa21.32■■□□□ 1
UBXN4-203ENST00000416538 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
UBXN4-203ENST00000416538 OVOS2A0A0G2JMS6 1433 aa21.3■■□□□ 1
UBXN4-203ENST00000416538 PDE3BQ13370 1112 aa21.3■■□□□ 1
UBXN4-203ENST00000416538 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
UBXN4-203ENST00000416538 TERF2IPQ9NYB0 399 aa21.3■■□□□ 1
UBXN4-203ENST00000416538 ANKRD36BQ8N2N9 1353 aa21.29■■□□□ 1
UBXN4-203ENST00000416538 EZH2Q15910 746 aaKnown RBP21.29■■□□□ 1
UBXN4-203ENST00000416538 PSDA5PKW4 1024 aaPredicted RBP21.28■■□□□ 1
UBXN4-203ENST00000416538 CAMKK2Q96RR4 588 aa21.28■■□□□ 1
UBXN4-203ENST00000416538 ERBB3P21860 1342 aa21.28■■□□□ 1
UBXN4-203ENST00000416538 CARD10Q9BWT7 1032 aa21.27■■□□□ 1
UBXN4-203ENST00000416538 TNS2Q63HR2 1409 aa21.27■■□□□ 1
UBXN4-203ENST00000416538 CLSPNQ9HAW4 1339 aa21.27■□□□□ 0.99
UBXN4-203ENST00000416538 SHANK3Q9BYB0 1731 aa21.26■□□□□ 0.99
UBXN4-203ENST00000416538 NHSQ6T4R5 1651 aa21.24■□□□□ 0.99
UBXN4-203ENST00000416538 CCDC7Q96M83 1385 aa21.24■□□□□ 0.99
UBXN4-203ENST00000416538 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
UBXN4-203ENST00000416538 DDB1Q16531 1140 aa21.24■□□□□ 0.99
UBXN4-203ENST00000416538 PTF1AQ7RTS3 328 aa21.24■□□□□ 0.99
UBXN4-203ENST00000416538 APBA3O96018 575 aa21.23■□□□□ 0.99
UBXN4-203ENST00000416538 MARCH10Q8NA82 808 aaPredicted RBP21.23■□□□□ 0.99
UBXN4-203ENST00000416538 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
UBXN4-203ENST00000416538 FBLN1P23142 703 aa21.22■□□□□ 0.99
UBXN4-203ENST00000416538 TMF1P82094 1093 aa21.22■□□□□ 0.99
UBXN4-203ENST00000416538 BCL9O00512 1426 aa21.21■□□□□ 0.99
UBXN4-203ENST00000416538 TIMELESSQ9UNS1 1208 aa21.2■□□□□ 0.98
UBXN4-203ENST00000416538 ANKRD26Q9UPS8 1709 aa21.2■□□□□ 0.98
UBXN4-203ENST00000416538 R3HDM1Q15032 1099 aaKnown RBP21.19■□□□□ 0.98
UBXN4-203ENST00000416538 ANKRD24Q8TF21 1146 aa21.19■□□□□ 0.98
UBXN4-203ENST00000416538 BTAF1O14981 1849 aa21.19■□□□□ 0.98
UBXN4-203ENST00000416538 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
UBXN4-203ENST00000416538 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
UBXN4-203ENST00000416538 KAT6BQ8WYB5 2073 aa21.16■□□□□ 0.98
UBXN4-203ENST00000416538 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
UBXN4-203ENST00000416538 COG3Q96JB2 828 aa21.16■□□□□ 0.98
UBXN4-203ENST00000416538 NLRP2Q9NX02 1062 aa21.16■□□□□ 0.98
UBXN4-203ENST00000416538 CASZ1Q86V15 1759 aa21.15■□□□□ 0.98
UBXN4-203ENST00000416538 FYB1O15117 783 aa21.15■□□□□ 0.98
UBXN4-203ENST00000416538 IP6K1Q92551 441 aa21.15■□□□□ 0.98
UBXN4-203ENST00000416538 GGNBP2Q9H3C7 697 aa21.15■□□□□ 0.98
UBXN4-203ENST00000416538 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
UBXN4-203ENST00000416538 NSD3Q9BZ95 1437 aa21.14■□□□□ 0.98
UBXN4-203ENST00000416538 CARD14Q9BXL6 1004 aa21.14■□□□□ 0.97
UBXN4-203ENST00000416538 HOXC9P31274 260 aa21.13■□□□□ 0.97
UBXN4-203ENST00000416538 MEGF6O75095 1541 aa21.13■□□□□ 0.97
UBXN4-203ENST00000416538 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
UBXN4-203ENST00000416538 LTV1Q96GA3 475 aaPredicted RBP21.12■□□□□ 0.97
UBXN4-203ENST00000416538 MAP2P11137 1827 aaKnown RBP21.12■□□□□ 0.97
UBXN4-203ENST00000416538 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
UBXN4-203ENST00000416538 C11orf95C9JLR9 678 aaPredicted RBP21.11■□□□□ 0.97
UBXN4-203ENST00000416538 IL2RBP14784 551 aa21.11■□□□□ 0.97
UBXN4-203ENST00000416538 RRS1Q15050 365 aaKnown RBP21.11■□□□□ 0.97
UBXN4-203ENST00000416538 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
UBXN4-203ENST00000416538 EXOC5O00471 708 aa21.1■□□□□ 0.97
UBXN4-203ENST00000416538 ANO8Q9HCE9 1232 aaPredicted RBP21.1■□□□□ 0.97
UBXN4-203ENST00000416538 KCNQ2O43526 872 aa21.09■□□□□ 0.97
UBXN4-203ENST00000416538 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
UBXN4-203ENST00000416538 PROM2Q8N271 834 aa21.08■□□□□ 0.97
UBXN4-203ENST00000416538 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.97
UBXN4-203ENST00000416538 PLSCR1O15162 318 aa21.07■□□□□ 0.96
UBXN4-203ENST00000416538 AMPHP49418 695 aa21.06■□□□□ 0.96
UBXN4-203ENST00000416538 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
UBXN4-203ENST00000416538 PKD1L3Q7Z443 1732 aa21.04■□□□□ 0.96
UBXN4-203ENST00000416538 TUBGCP6Q96RT7 1819 aa21.04■□□□□ 0.96
UBXN4-203ENST00000416538 HSPA5P11021 654 aaKnown RBP21.04■□□□□ 0.96
UBXN4-203ENST00000416538 LY75O60449 1722 aa21.04■□□□□ 0.96
UBXN4-203ENST00000416538 TOGARAM1Q9Y4F4 1720 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms