RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 BLMP54132 1417 aaPredicted RBP11.19□□□□□ -0.62
RBM39-208ENST00000416108 INSRP06213 1382 aa11.19□□□□□ -0.62
RBM39-208ENST00000416108 JCADQ9P266 1359 aa11.19□□□□□ -0.62
RBM39-208ENST00000416108 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
RBM39-208ENST00000416108 HOXC9P31274 260 aa11.19□□□□□ -0.62
RBM39-208ENST00000416108 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
RBM39-208ENST00000416108 PLCH1Q4KWH8 1693 aa11.19□□□□□ -0.62
RBM39-208ENST00000416108 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
RBM39-208ENST00000416108 NEFMP07197 916 aa11.18□□□□□ -0.62
RBM39-208ENST00000416108 ARHGEF25Q86VW2 580 aa11.18□□□□□ -0.62
RBM39-208ENST00000416108 IP6K1Q92551 441 aa11.18□□□□□ -0.62
RBM39-208ENST00000416108 PNNQ9H307 717 aaKnown RBP11.18□□□□□ -0.62
RBM39-208ENST00000416108 PRDM11Q9NQV5 511 aa11.18□□□□□ -0.62
RBM39-208ENST00000416108 CPDO75976 1380 aa11.17□□□□□ -0.62
RBM39-208ENST00000416108 KIAA0232Q92628 1395 aa11.17□□□□□ -0.62
RBM39-208ENST00000416108 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
RBM39-208ENST00000416108 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.622e-21■□□□□ 10.6
RBM39-208ENST00000416108 LMO7Q8WWI1 1683 aa11.17□□□□□ -0.62
RBM39-208ENST00000416108 NWD2Q9ULI1 1742 aa11.16□□□□□ -0.62
RBM39-208ENST00000416108 HSP90AB2PQ58FF8 381 aa11.16□□□□□ -0.62
RBM39-208ENST00000416108 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
RBM39-208ENST00000416108 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
RBM39-208ENST00000416108 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
RBM39-208ENST00000416108 IL13P35225 146 aa11.15□□□□□ -0.62
RBM39-208ENST00000416108 EIF4A2Q14240 407 aaKnown RBP11.15□□□□□ -0.62
RBM39-208ENST00000416108 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
RBM39-208ENST00000416108 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
RBM39-208ENST00000416108 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
RBM39-208ENST00000416108 CAMTA1Q9Y6Y1 1673 aa11.14□□□□□ -0.63
RBM39-208ENST00000416108 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
RBM39-208ENST00000416108 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
RBM39-208ENST00000416108 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
RBM39-208ENST00000416108 HSPA1LP34931 641 aa11.14□□□□□ -0.63
RBM39-208ENST00000416108 CHRNA2Q15822 529 aa11.14□□□□□ -0.63
RBM39-208ENST00000416108 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
RBM39-208ENST00000416108 HNRNPUQ00839 825 aaKnown RBP eCLIP11.13□□□□□ -0.63
RBM39-208ENST00000416108 VIRMAQ69YN4 1812 aaKnown RBP11.13□□□□□ -0.63
RBM39-208ENST00000416108 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
RBM39-208ENST00000416108 PARP4Q9UKK3 1724 aaKnown RBP11.12□□□□□ -0.63
RBM39-208ENST00000416108 ADAMTS2O95450 1211 aa11.12□□□□□ -0.63
RBM39-208ENST00000416108 HMOX1P09601 288 aa11.12□□□□□ -0.63
RBM39-208ENST00000416108 EVA1CP58658 441 aa11.12□□□□□ -0.63
RBM39-208ENST00000416108 CCDC146Q8IYE0 955 aa11.12□□□□□ -0.63
RBM39-208ENST00000416108 WNK3Q9BYP7 1800 aa11.12□□□□□ -0.63
RBM39-208ENST00000416108 ERBB3P21860 1342 aa11.11□□□□□ -0.63
RBM39-208ENST00000416108 FCHSD2O94868 740 aa11.11□□□□□ -0.63
RBM39-208ENST00000416108 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
RBM39-208ENST00000416108 SULT6B1Q6IMI4 303 aa11.11□□□□□ -0.63
RBM39-208ENST00000416108 RUNDC1Q96C34 613 aa11.11□□□□□ -0.63
RBM39-208ENST00000416108 COL5A2P05997 1499 aaPredicted RBP11.11□□□□□ -0.63
RBM39-208ENST00000416108 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
RBM39-208ENST00000416108 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.1□□□□□ -0.63
RBM39-208ENST00000416108 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
RBM39-208ENST00000416108 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
RBM39-208ENST00000416108 NLRP2Q9NX02 1062 aa11.1□□□□□ -0.63
RBM39-208ENST00000416108 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
RBM39-208ENST00000416108 FBXO41Q8TF61 875 aa11.09□□□□□ -0.63
RBM39-208ENST00000416108 EYA1Q99502 592 aa11.09□□□□□ -0.63
RBM39-208ENST00000416108 BTG4Q9NY30 223 aa11.09□□□□□ -0.63
RBM39-208ENST00000416108 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
RBM39-208ENST00000416108 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
RBM39-208ENST00000416108 FAM83GA6ND36 823 aa11.08□□□□□ -0.64
RBM39-208ENST00000416108 NGEFQ8N5V2 710 aa11.08□□□□□ -0.64
RBM39-208ENST00000416108 RSPH6AQ9H0K4 717 aa11.08□□□□□ -0.64
RBM39-208ENST00000416108 KDRP35968 1356 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 LRP6O75581 1613 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 APAF1O14727 1248 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 NBPF6Q5VWK0 638 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 AEBP1Q8IUX7 1158 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 USHBP1Q8N6Y0 703 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 NBPF4Q96M43 638 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 C8orf37Q96NL8 207 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 CRB1P82279 1406 aa11.07□□□□□ -0.64
RBM39-208ENST00000416108 TCP11L2Q8N4U5 519 aa11.06□□□□□ -0.64
RBM39-208ENST00000416108 RAPGEF4Q8WZA2 1011 aa11.06□□□□□ -0.64
RBM39-208ENST00000416108 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
RBM39-208ENST00000416108 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
RBM39-208ENST00000416108 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
RBM39-208ENST00000416108 ZBED9Q6R2W3 1325 aa11.06□□□□□ -0.64
RBM39-208ENST00000416108 SLIT2O94813 1529 aa11.05□□□□□ -0.64
RBM39-208ENST00000416108 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
RBM39-208ENST00000416108 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
RBM39-208ENST00000416108 NCAPD2Q15021 1401 aa11.05□□□□□ -0.64
RBM39-208ENST00000416108 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
RBM39-208ENST00000416108 PLEKHF1Q96S99 279 aa11.05□□□□□ -0.64
RBM39-208ENST00000416108 KAT6BQ8WYB5 2073 aa11.04□□□□□ -0.64
RBM39-208ENST00000416108 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
RBM39-208ENST00000416108 TMPOP42166 694 aaKnown RBP11.04□□□□□ -0.64
RBM39-208ENST00000416108 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
RBM39-208ENST00000416108 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
RBM39-208ENST00000416108 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
RBM39-208ENST00000416108 CARD10Q9BWT7 1032 aa11.04□□□□□ -0.64
RBM39-208ENST00000416108 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
RBM39-208ENST00000416108 RIPK4P57078 832 aa11.03□□□□□ -0.64
RBM39-208ENST00000416108 NFE2L2Q16236 605 aa11.03□□□□□ -0.64
RBM39-208ENST00000416108 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
RBM39-208ENST00000416108 RRP7AQ9Y3A4 280 aaKnown RBP11.03□□□□□ -0.64
RBM39-208ENST00000416108 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
RBM39-208ENST00000416108 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
RBM39-208ENST00000416108 NCBP3Q53F19 620 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms