RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SOX12O15370 315 aa12.55□□□□□ -0.4
CHRNA1-206ENST00000416004 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
CHRNA1-206ENST00000416004 CARD14Q9BXL6 1004 aa12.55□□□□□ -0.4
CHRNA1-206ENST00000416004 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
CHRNA1-206ENST00000416004 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
CHRNA1-206ENST00000416004 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
CHRNA1-206ENST00000416004 SPATA31A1Q5TZJ5 1347 aa12.54□□□□□ -0.4
CHRNA1-206ENST00000416004 CCDC184Q52MB2 194 aa12.53□□□□□ -0.4
CHRNA1-206ENST00000416004 THRAP3Q9Y2W1 955 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-206ENST00000416004 AATKQ6ZMQ8 1374 aa12.53□□□□□ -0.4
CHRNA1-206ENST00000416004 LMO7Q8WWI1 1683 aa12.53□□□□□ -0.4
CHRNA1-206ENST00000416004 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
CHRNA1-206ENST00000416004 A0A1W2PP64 1363 aa12.52□□□□□ -0.4
CHRNA1-206ENST00000416004 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-206ENST00000416004 TOM1L2Q6ZVM7 507 aa12.52□□□□□ -0.41
CHRNA1-206ENST00000416004 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.41
CHRNA1-206ENST00000416004 CAMTA1Q9Y6Y1 1673 aa12.52□□□□□ -0.41
CHRNA1-206ENST00000416004 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 CC2D1BQ5T0F9 858 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 KNSTRNQ9Y448 316 aa12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 BLMP54132 1417 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 CRB1P82279 1406 aa12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 COG3Q96JB2 828 aa12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-206ENST00000416004 USP31Q70CQ4 1352 aa12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 ANKRD36BQ8N2N9 1353 aa12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 ABCC6O95255 1503 aa12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 LTN1O94822 1766 aa12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 LARP1Q6PKG0 1096 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 NME9Q86XW9 330 aa12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
CHRNA1-206ENST00000416004 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
CHRNA1-206ENST00000416004 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
CHRNA1-206ENST00000416004 THSD7AQ9UPZ6 1657 aa12.49□□□□□ -0.41
CHRNA1-206ENST00000416004 RGPD5Q99666 1765 aa12.48□□□□□ -0.41
CHRNA1-206ENST00000416004 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
CHRNA1-206ENST00000416004 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
CHRNA1-206ENST00000416004 BAG6P46379 1132 aa12.48□□□□□ -0.41
CHRNA1-206ENST00000416004 RALBP1Q15311 655 aa12.48□□□□□ -0.41
CHRNA1-206ENST00000416004 CDCA7Q9BWT1 371 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-206ENST00000416004 FAM196AQ6ZSG2 479 aa12.47□□□□□ -0.41
CHRNA1-206ENST00000416004 COL18A1P39060 1754 aa12.47□□□□□ -0.41
CHRNA1-206ENST00000416004 NFAT5O94916 1531 aa12.47□□□□□ -0.41
CHRNA1-206ENST00000416004 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
CHRNA1-206ENST00000416004 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
CHRNA1-206ENST00000416004 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
CHRNA1-206ENST00000416004 MYBBP1AQ9BQG0 1328 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-206ENST00000416004 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-206ENST00000416004 MRS2Q9HD23 443 aa12.45□□□□□ -0.42
CHRNA1-206ENST00000416004 AMPHP49418 695 aa12.44□□□□□ -0.42
CHRNA1-206ENST00000416004 DDB1Q16531 1140 aa12.44□□□□□ -0.42
CHRNA1-206ENST00000416004 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
CHRNA1-206ENST00000416004 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
CHRNA1-206ENST00000416004 OVOS2A0A0J9YW53 1432 aa12.44□□□□□ -0.42
CHRNA1-206ENST00000416004 OVOS2Q6IE36 1432 aa12.44□□□□□ -0.42
CHRNA1-206ENST00000416004 FAM208AQ9UK61 1670 aaKnown RBP12.43□□□□□ -0.42
CHRNA1-206ENST00000416004 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
CHRNA1-206ENST00000416004 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
CHRNA1-206ENST00000416004 SMG6Q86US8 1419 aaKnown RBP12.42□□□□□ -0.42
CHRNA1-206ENST00000416004 ANKRD24Q8TF21 1146 aa12.42□□□□□ -0.42
CHRNA1-206ENST00000416004 CGNL1Q0VF96 1302 aa12.41□□□□□ -0.42
CHRNA1-206ENST00000416004 EXOC5O00471 708 aa12.41□□□□□ -0.42
CHRNA1-206ENST00000416004 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
CHRNA1-206ENST00000416004 FAM182BQ5T319 152 aa12.41□□□□□ -0.42
CHRNA1-206ENST00000416004 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
CHRNA1-206ENST00000416004 ERBB3P21860 1342 aa12.41□□□□□ -0.42
CHRNA1-206ENST00000416004 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
CHRNA1-206ENST00000416004 IP6K1Q92551 441 aa12.4□□□□□ -0.42
CHRNA1-206ENST00000416004 FYB1O15117 783 aa12.4□□□□□ -0.42
CHRNA1-206ENST00000416004 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
CHRNA1-206ENST00000416004 RTL1A6NKG5 1358 aa12.39□□□□□ -0.43
CHRNA1-206ENST00000416004 TRIM37O94972 964 aa12.39□□□□□ -0.43
CHRNA1-206ENST00000416004 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
CHRNA1-206ENST00000416004 LTV1Q96GA3 475 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-206ENST00000416004 EP400Q96L91 3159 aa12.39□□□□□ -0.43
CHRNA1-206ENST00000416004 APBA3O96018 575 aa12.38□□□□□ -0.43
CHRNA1-206ENST00000416004 IL2RBP14784 551 aa12.38□□□□□ -0.43
CHRNA1-206ENST00000416004 MORC1Q86VD1 984 aa12.38□□□□□ -0.43
CHRNA1-206ENST00000416004 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
CHRNA1-206ENST00000416004 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-206ENST00000416004 NSD2O96028 1365 aa12.38□□□□□ -0.43
CHRNA1-206ENST00000416004 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-206ENST00000416004 MAP3K19Q56UN5 1328 aa12.37□□□□□ -0.43
CHRNA1-206ENST00000416004 HOXC9P31274 260 aa12.37□□□□□ -0.43
CHRNA1-206ENST00000416004 TNNT2P45379 298 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-206ENST00000416004 KIF24Q5T7B8 1368 aa12.36□□□□□ -0.43
CHRNA1-206ENST00000416004 EN1Q05925 392 aaPredicted RBP12.36□□□□□ -0.43
CHRNA1-206ENST00000416004 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
CHRNA1-206ENST00000416004 ANKRD26Q9UPS8 1709 aa12.35□□□□□ -0.43
CHRNA1-206ENST00000416004 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
CHRNA1-206ENST00000416004 FLT4P35916 1363 aa12.35□□□□□ -0.43
CHRNA1-206ENST00000416004 TNS2Q63HR2 1409 aa12.34□□□□□ -0.43
CHRNA1-206ENST00000416004 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
CHRNA1-206ENST00000416004 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
CHRNA1-206ENST00000416004 NBPF14Q5TI25 921 aa12.34□□□□□ -0.43
CHRNA1-206ENST00000416004 KAT6BQ8WYB5 2073 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms