RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 GRIN2AQ12879 1464 aa10.07□□□□□ -0.8
EPHA4-204ENST00000415749 RNF223E7ERA6 249 aa10.07□□□□□ -0.8
EPHA4-204ENST00000415749 ZBTB24O43167 697 aaPredicted RBP10.07□□□□□ -0.8
EPHA4-204ENST00000415749 PTK2Q05397 1052 aa10.07□□□□□ -0.8
EPHA4-204ENST00000415749 PDXDC2PQ6P474 469 aa10.07□□□□□ -0.8
EPHA4-204ENST00000415749 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
EPHA4-204ENST00000415749 ABCC10Q5T3U5 1492 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 ZBBXA8MT70 800 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 SOX11P35716 441 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 NR1H3Q13133 447 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
EPHA4-204ENST00000415749 PPP1R18Q6NYC8 613 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 ZNF592Q92610 1267 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 NUP160Q12769 1436 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 PBRM1Q86U86 1689 aa10.06□□□□□ -0.8
EPHA4-204ENST00000415749 PPEF1O14829 653 aaPredicted RBP10.05□□□□□ -0.8
EPHA4-204ENST00000415749 EIF4G2P78344 907 aaKnown RBP eCLIP10.05□□□□□ -0.8
EPHA4-204ENST00000415749 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
EPHA4-204ENST00000415749 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-204ENST00000415749 ABCA10Q8WWZ4 1543 aa10.03□□□□□ -0.8
EPHA4-204ENST00000415749 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
EPHA4-204ENST00000415749 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
EPHA4-204ENST00000415749 ARHGAP9Q9BRR9 750 aa10.02□□□□□ -0.81
EPHA4-204ENST00000415749 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.81
EPHA4-204ENST00000415749 POM121CA8CG34 1229 aa10.01□□□□□ -0.81
EPHA4-204ENST00000415749 FBXO45P0C2W1 286 aa10.01□□□□□ -0.81
EPHA4-204ENST00000415749 SEMA3FQ13275 785 aa10.01□□□□□ -0.81
EPHA4-204ENST00000415749 BPHLQ86WA6 291 aaPredicted RBP10.01□□□□□ -0.81
EPHA4-204ENST00000415749 BAP1Q92560 729 aa10.01□□□□□ -0.81
EPHA4-204ENST00000415749 GLMNQ92990 594 aa10.01□□□□□ -0.81
EPHA4-204ENST00000415749 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
EPHA4-204ENST00000415749 KDM6BO15054 1643 aa10□□□□□ -0.81
EPHA4-204ENST00000415749 RPIAP49247 311 aa10□□□□□ -0.81
EPHA4-204ENST00000415749 MCCD1P59942 119 aaPredicted RBP10□□□□□ -0.81
EPHA4-204ENST00000415749 AGERQ15109 404 aa10□□□□□ -0.81
EPHA4-204ENST00000415749 ZNF511Q8NB15 262 aa10□□□□□ -0.81
EPHA4-204ENST00000415749 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
EPHA4-204ENST00000415749 SHROOM2Q13796 1616 aa10□□□□□ -0.81
EPHA4-204ENST00000415749 ABCA5Q8WWZ7 1642 aa10□□□□□ -0.81
EPHA4-204ENST00000415749 FHAD1B1AJZ9 1412 aa9.99□□□□□ -0.81
EPHA4-204ENST00000415749 TRIM32Q13049 653 aa9.99□□□□□ -0.81
EPHA4-204ENST00000415749 ZBTB33Q86T24 672 aa9.99□□□□□ -0.81
EPHA4-204ENST00000415749 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
EPHA4-204ENST00000415749 HDGFL1Q5TGJ6 251 aa9.98□□□□□ -0.81
EPHA4-204ENST00000415749 SH3BP5LQ7L8J4 393 aa9.98□□□□□ -0.81
EPHA4-204ENST00000415749 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
EPHA4-204ENST00000415749 ALG2Q9H553 416 aa9.97□□□□□ -0.81
EPHA4-204ENST00000415749 MAPKBP1O60336 1514 aa9.97□□□□□ -0.81
EPHA4-204ENST00000415749 WNT7BP56706 349 aa9.96□□□□□ -0.82
EPHA4-204ENST00000415749 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.82
EPHA4-204ENST00000415749 WRNQ14191 1432 aaPredicted RBP eCLIP9.96□□□□□ -0.82
EPHA4-204ENST00000415749 DIP2BQ9P265 1576 aa9.96□□□□□ -0.82
EPHA4-204ENST00000415749 MAGEB6P1A0A0J9YX57 407 aa9.95□□□□□ -0.82
EPHA4-204ENST00000415749 SH3BP2P78314 561 aa9.95□□□□□ -0.82
EPHA4-204ENST00000415749 SH3RF1Q7Z6J0 888 aa9.95□□□□□ -0.82
EPHA4-204ENST00000415749 ADAM32Q8TC27 787 aa9.95□□□□□ -0.82
EPHA4-204ENST00000415749 FBXO41Q8TF61 875 aa9.95□□□□□ -0.82
EPHA4-204ENST00000415749 ADAMTS12P58397 1594 aa9.95□□□□□ -0.82
EPHA4-204ENST00000415749 TSPOAP1O95153 1857 aa9.95□□□□□ -0.82
EPHA4-204ENST00000415749 A0A0G2JS52 829 aa9.94□□□□□ -0.82
EPHA4-204ENST00000415749 CARD14Q9BXL6 1004 aa9.94□□□□□ -0.82
EPHA4-204ENST00000415749 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
EPHA4-204ENST00000415749 ADGRL1O94910 1474 aa9.93□□□□□ -0.82
EPHA4-204ENST00000415749 DZIP3Q86Y13 1208 aaKnown RBP9.93□□□□□ -0.82
EPHA4-204ENST00000415749 ADAMTS19Q8TE59 1207 aa9.93□□□□□ -0.82
EPHA4-204ENST00000415749 FOXJ1Q92949 421 aa9.93□□□□□ -0.82
EPHA4-204ENST00000415749 SLC19A1P41440 591 aa9.92□□□□□ -0.82
EPHA4-204ENST00000415749 SLC10A4Q96EP9 437 aa9.92□□□□□ -0.82
EPHA4-204ENST00000415749 OCSTAMPQ9BR26 566 aa9.92□□□□□ -0.82
EPHA4-204ENST00000415749 CDV3Q9UKY7 258 aaKnown RBP9.92□□□□□ -0.82
EPHA4-204ENST00000415749 VARSP26640 1264 aaKnown RBP9.91□□□□□ -0.82
EPHA4-204ENST00000415749 ERFEQ4G0M1 354 aa9.91□□□□□ -0.82
EPHA4-204ENST00000415749 LIAT1Q6ZQX7 453 aa9.91□□□□□ -0.82
EPHA4-204ENST00000415749 KCTD17Q8N5Z5 321 aa9.91□□□□□ -0.82
EPHA4-204ENST00000415749 HECW2Q9P2P5 1572 aa9.9□□□□□ -0.82
EPHA4-204ENST00000415749 FAM174AQ8TBP5 190 aa9.9□□□□□ -0.82
EPHA4-204ENST00000415749 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
EPHA4-204ENST00000415749 ADCY10Q96PN6 1610 aa9.89□□□□□ -0.83
EPHA4-204ENST00000415749 NBPF20Q3BBV1 942 aa9.89□□□□□ -0.83
EPHA4-204ENST00000415749 TRMT44Q8IYL2 757 aaKnown RBP9.89□□□□□ -0.83
EPHA4-204ENST00000415749 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
EPHA4-204ENST00000415749 TRAIPQ9BWF2 469 aa9.89□□□□□ -0.83
EPHA4-204ENST00000415749 TTBK1Q5TCY1 1321 aaPredicted RBP9.88□□□□□ -0.83
EPHA4-204ENST00000415749 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
EPHA4-204ENST00000415749 SKOR1P84550 965 aa9.88□□□□□ -0.83
EPHA4-204ENST00000415749 SLFNL1Q499Z3 407 aa9.88□□□□□ -0.83
EPHA4-204ENST00000415749 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
EPHA4-204ENST00000415749 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
EPHA4-204ENST00000415749 NFATC2IPQ8NCF5 419 aa9.87□□□□□ -0.83
EPHA4-204ENST00000415749 CEP126Q9P2H0 1117 aa9.87□□□□□ -0.83
EPHA4-204ENST00000415749 PTPRGP23470 1445 aa9.86□□□□□ -0.83
EPHA4-204ENST00000415749 PPP1R12CQ9BZL4 782 aa9.86□□□□□ -0.83
EPHA4-204ENST00000415749 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-204ENST00000415749 COL17A1Q9UMD9 1497 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-204ENST00000415749 RNF20Q5VTR2 975 aa9.85□□□□□ -0.83
EPHA4-204ENST00000415749 SPRYD7Q5W111 196 aa9.85□□□□□ -0.83
EPHA4-204ENST00000415749 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
EPHA4-204ENST00000415749 AEBP1Q8IUX7 1158 aa9.85□□□□□ -0.83
EPHA4-204ENST00000415749 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-204ENST00000415749 WNT7AO00755 349 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms