RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CDCA7Q9BWT1 371 aaPredicted RBP28.71■■■□□ 2.19
PTPRU-203ENST00000415600 SLC12A5Q9H2X9 1139 aa28.71■■■□□ 2.19
PTPRU-203ENST00000415600 CLSPNQ9HAW4 1339 aa28.71■■■□□ 2.19
PTPRU-203ENST00000415600 DISP2A7MBM2 1401 aa28.7■■■□□ 2.19
PTPRU-203ENST00000415600 TRIM37O94972 964 aa28.7■■■□□ 2.18
PTPRU-203ENST00000415600 USP31Q70CQ4 1352 aa28.7■■■□□ 2.18
PTPRU-203ENST00000415600 EDC4Q6P2E9 1401 aaKnown RBP28.7■■■□□ 2.18
PTPRU-203ENST00000415600 EN1Q05925 392 aaPredicted RBP28.69■■■□□ 2.18
PTPRU-203ENST00000415600 TIMELESSQ9UNS1 1208 aa28.68■■■□□ 2.18
PTPRU-203ENST00000415600 ABCC6O95255 1503 aa28.67■■■□□ 2.18
PTPRU-203ENST00000415600 PARD3Q8TEW0 1356 aa28.66■■■□□ 2.18
PTPRU-203ENST00000415600 DDB1Q16531 1140 aa28.66■■■□□ 2.18
PTPRU-203ENST00000415600 TESK2Q96S53 571 aa28.66■■■□□ 2.18
PTPRU-203ENST00000415600 AXIN2Q9Y2T1 843 aa28.66■■■□□ 2.18
PTPRU-203ENST00000415600 CD163L1Q9NR16 1453 aa28.66■■■□□ 2.18
PTPRU-203ENST00000415600 APBA3O96018 575 aa28.65■■■□□ 2.18
PTPRU-203ENST00000415600 NME9Q86XW9 330 aa28.65■■■□□ 2.18
PTPRU-203ENST00000415600 NFAT5O94916 1531 aa28.64■■■□□ 2.18
PTPRU-203ENST00000415600 PARP4Q9UKK3 1724 aaKnown RBP28.64■■■□□ 2.18
PTPRU-203ENST00000415600 CARD10Q9BWT7 1032 aa28.64■■■□□ 2.18
PTPRU-203ENST00000415600 COL18A1P39060 1754 aa28.64■■■□□ 2.18
PTPRU-203ENST00000415600 A0A1W2PP64 1363 aa28.64■■■□□ 2.17
PTPRU-203ENST00000415600 TMF1P82094 1093 aa28.63■■■□□ 2.17
PTPRU-203ENST00000415600 OVOS2A0A0G2JMS6 1433 aa28.62■■■□□ 2.17
PTPRU-203ENST00000415600 OVOS2A0A0J9YW53 1432 aa28.62■■■□□ 2.17
PTPRU-203ENST00000415600 OVOS2Q6IE36 1432 aa28.62■■■□□ 2.17
PTPRU-203ENST00000415600 CDCA8Q53HL2 280 aa28.62■■■□□ 2.17
PTPRU-203ENST00000415600 USP47Q96K76 1375 aa28.61■■■□□ 2.17
PTPRU-203ENST00000415600 CCDC7Q96M83 1385 aa28.61■■■□□ 2.17
PTPRU-203ENST00000415600 TNS1Q9HBL0 1735 aaKnown RBP28.61■■■□□ 2.17
PTPRU-203ENST00000415600 SRCAPQ6ZRS2 3230 aa28.6■■■□□ 2.17
PTPRU-203ENST00000415600 USP54Q70EL1 1684 aa28.59■■■□□ 2.17
PTPRU-203ENST00000415600 EZH2Q15910 746 aaKnown RBP28.58■■■□□ 2.17
PTPRU-203ENST00000415600 CAMKK2Q96RR4 588 aa28.58■■■□□ 2.17
PTPRU-203ENST00000415600 COG3Q96JB2 828 aa28.55■■■□□ 2.16
PTPRU-203ENST00000415600 PSDA5PKW4 1024 aaPredicted RBP28.54■■■□□ 2.16
PTPRU-203ENST00000415600 EXOC5O00471 708 aa28.54■■■□□ 2.16
PTPRU-203ENST00000415600 ANKRD36BQ8N2N9 1353 aa28.53■■■□□ 2.16
PTPRU-203ENST00000415600 LRRC37A3O60309 1634 aa28.53■■■□□ 2.16
PTPRU-203ENST00000415600 NBPF14Q5TI25 921 aa28.53■■■□□ 2.16
PTPRU-203ENST00000415600 NLRP2Q9NX02 1062 aa28.53■■■□□ 2.16
PTPRU-203ENST00000415600 ERBB3P21860 1342 aa28.53■■■□□ 2.16
PTPRU-203ENST00000415600 RGPD5Q99666 1765 aa28.51■■■□□ 2.15
PTPRU-203ENST00000415600 R3HDM1Q15032 1099 aaKnown RBP28.5■■■□□ 2.15
PTPRU-203ENST00000415600 ANKRD24Q8TF21 1146 aa28.49■■■□□ 2.15
PTPRU-203ENST00000415600 WNK3Q9BYP7 1800 aa28.49■■■□□ 2.15
PTPRU-203ENST00000415600 BCL11BQ9C0K0 894 aaPredicted RBP28.48■■■□□ 2.15
PTPRU-203ENST00000415600 LTN1O94822 1766 aa28.48■■■□□ 2.15
PTPRU-203ENST00000415600 BCL9O00512 1426 aa28.47■■■□□ 2.15
PTPRU-203ENST00000415600 MARCH10Q8NA82 808 aaPredicted RBP28.46■■■□□ 2.15
PTPRU-203ENST00000415600 IP6K1Q92551 441 aa28.45■■■□□ 2.15
PTPRU-203ENST00000415600 PEAK1Q9H792 1746 aa28.45■■■□□ 2.15
PTPRU-203ENST00000415600 IL2RBP14784 551 aa28.45■■■□□ 2.14
PTPRU-203ENST00000415600 LRP5O75197 1615 aa28.44■■■□□ 2.14
PTPRU-203ENST00000415600 PLSCR1O15162 318 aa28.44■■■□□ 2.14
PTPRU-203ENST00000415600 TNS2Q63HR2 1409 aa28.44■■■□□ 2.14
PTPRU-203ENST00000415600 AMPHP49418 695 aa28.43■■■□□ 2.14
PTPRU-203ENST00000415600 RREB1Q92766 1687 aa28.39■■■□□ 2.14
PTPRU-203ENST00000415600 MAP3K19Q56UN5 1328 aa28.38■■■□□ 2.13
PTPRU-203ENST00000415600 LTV1Q96GA3 475 aaPredicted RBP28.37■■■□□ 2.13
PTPRU-203ENST00000415600 RGPD3A6NKT7 1758 aaPredicted RBP28.37■■■□□ 2.13
PTPRU-203ENST00000415600 RGPD4Q7Z3J3 1758 aa28.37■■■□□ 2.13
PTPRU-203ENST00000415600 SBF2Q86WG5 1849 aa28.36■■■□□ 2.13
PTPRU-203ENST00000415600 RTL1A6NKG5 1358 aa28.36■■■□□ 2.13
PTPRU-203ENST00000415600 FYB1O15117 783 aa28.36■■■□□ 2.13
PTPRU-203ENST00000415600 FAM208AQ9UK61 1670 aaKnown RBP28.35■■■□□ 2.13
PTPRU-203ENST00000415600 HOXC9P31274 260 aa28.35■■■□□ 2.13
PTPRU-203ENST00000415600 GGNBP2Q9H3C7 697 aa28.34■■■□□ 2.13
PTPRU-203ENST00000415600 NUP188Q5SRE5 1749 aa28.34■■■□□ 2.13
PTPRU-203ENST00000415600 SMG6Q86US8 1419 aaKnown RBP28.32■■■□□ 2.12
PTPRU-203ENST00000415600 EIF4G2P78344 907 aaKnown RBP eCLIP28.28■■■□□ 2.12
PTPRU-203ENST00000415600 RRS1Q15050 365 aaKnown RBP28.28■■■□□ 2.12
PTPRU-203ENST00000415600 KIF24Q5T7B8 1368 aa28.27■■■□□ 2.12
PTPRU-203ENST00000415600 PTF1AQ7RTS3 328 aa28.27■■■□□ 2.12
PTPRU-203ENST00000415600 NSD3Q9BZ95 1437 aa28.26■■■□□ 2.11
PTPRU-203ENST00000415600 FBLN1P23142 703 aa28.25■■■□□ 2.11
PTPRU-203ENST00000415600 ACSBG1Q96GR2 724 aa28.25■■■□□ 2.11
PTPRU-203ENST00000415600 CGNL1Q0VF96 1302 aa28.25■■■□□ 2.11
PTPRU-203ENST00000415600 TXNRD1Q16881 649 aa28.24■■■□□ 2.11
PTPRU-203ENST00000415600 DDX54Q8TDD1 881 aaKnown RBP28.24■■■□□ 2.11
PTPRU-203ENST00000415600 KIF20BQ96Q89 1820 aa28.24■■■□□ 2.11
PTPRU-203ENST00000415600 POLR3GLQ9BT43 218 aa28.24■■■□□ 2.11
PTPRU-203ENST00000415600 SPON1Q9HCB6 807 aa28.24■■■□□ 2.11
PTPRU-203ENST00000415600 NHSQ6T4R5 1651 aa28.23■■■□□ 2.11
PTPRU-203ENST00000415600 KCNQ2O43526 872 aa28.23■■■□□ 2.11
PTPRU-203ENST00000415600 STK32BQ9NY57 414 aa28.23■■■□□ 2.11
PTPRU-203ENST00000415600 FLT4P35916 1363 aa28.22■■■□□ 2.11
PTPRU-203ENST00000415600 CARD14Q9BXL6 1004 aa28.21■■■□□ 2.11
PTPRU-203ENST00000415600 INSRP06213 1382 aa28.21■■■□□ 2.11
PTPRU-203ENST00000415600 ZCRB1Q8TBF4 217 aaKnown RBP28.2■■■□□ 2.11
PTPRU-203ENST00000415600 RAPGEF4Q8WZA2 1011 aa28.2■■■□□ 2.11
PTPRU-203ENST00000415600 PROM2Q8N271 834 aa28.2■■■□□ 2.1
PTPRU-203ENST00000415600 PPP1R1BQ9UD71 204 aaPredicted RBP28.2■■■□□ 2.1
PTPRU-203ENST00000415600 MYOM1P52179 1685 aa28.19■■■□□ 2.1
PTPRU-203ENST00000415600 KAT6BQ8WYB5 2073 aa28.19■■■□□ 2.1
PTPRU-203ENST00000415600 ANO8Q9HCE9 1232 aaPredicted RBP28.16■■■□□ 2.1
PTPRU-203ENST00000415600 TATP17735 454 aaPredicted RBP28.16■■■□□ 2.1
PTPRU-203ENST00000415600 HSP90AB2PQ58FF8 381 aa28.16■■■□□ 2.1
PTPRU-203ENST00000415600 NBPF6Q5VWK0 638 aa28.16■■■□□ 2.1
PTPRU-203ENST00000415600 NBPF4Q96M43 638 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms