RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ZNF354CQ86Y25 554 aa21.85■■□□□ 1.09
SHANK3-202ENST00000414786 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.85■■□□□ 1.09
SHANK3-202ENST00000414786 LEKR1Q6ZMV7 388 aa21.85■■□□□ 1.09
SHANK3-202ENST00000414786 CCDC57Q2TAC2 916 aa21.85■■□□□ 1.09
SHANK3-202ENST00000414786 STIM1Q13586 685 aa21.84■■□□□ 1.09
SHANK3-202ENST00000414786 CCDC82Q8N4S0 544 aa21.83■■□□□ 1.09
SHANK3-202ENST00000414786 IDH1O75874 414 aaKnown RBP21.83■■□□□ 1.09
SHANK3-202ENST00000414786 NASPP49321 788 aaPredicted RBP21.83■■□□□ 1.09
SHANK3-202ENST00000414786 ANKIB1Q9P2G1 1089 aa21.83■■□□□ 1.09
SHANK3-202ENST00000414786 TNIKQ9UKE5 1360 aa21.82■■□□□ 1.08
SHANK3-202ENST00000414786 GNAI1P63096 354 aa21.82■■□□□ 1.08
SHANK3-202ENST00000414786 TMOD2Q9NZR1 351 aa21.82■■□□□ 1.08
SHANK3-202ENST00000414786 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
SHANK3-202ENST00000414786 MINDY4BA8MYZ0 360 aa21.82■■□□□ 1.08
SHANK3-202ENST00000414786 TRIM22Q8IYM9 498 aa21.82■■□□□ 1.08
SHANK3-202ENST00000414786 GPRASP1Q5JY77 1395 aa21.81■■□□□ 1.08
SHANK3-202ENST00000414786 NACAP1Q9BZK3 213 aa21.81■■□□□ 1.08
SHANK3-202ENST00000414786 GRIPAP1Q4V328 841 aa21.81■■□□□ 1.08
SHANK3-202ENST00000414786 POLR3DP05423 398 aaPredicted RBP21.81■■□□□ 1.08
SHANK3-202ENST00000414786 TRIM21P19474 475 aaKnown RBP21.81■■□□□ 1.08
SHANK3-202ENST00000414786 NUCB2P80303 420 aa21.8■■□□□ 1.08
SHANK3-202ENST00000414786 PLEKHO1Q53GL0 409 aaPredicted RBP21.8■■□□□ 1.08
SHANK3-202ENST00000414786 KIAA0754O94854 1291 aa21.8■■□□□ 1.08
SHANK3-202ENST00000414786 SPTY2D1Q68D10 685 aaPredicted RBP21.8■■□□□ 1.08
SHANK3-202ENST00000414786 BCCIPQ9P287 314 aaKnown RBP eCLIP21.8■■□□□ 1.08
SHANK3-202ENST00000414786 MRPS9P82933 396 aaKnown RBP21.8■■□□□ 1.08
SHANK3-202ENST00000414786 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.8■■□□□ 1.08
SHANK3-202ENST00000414786 KIAA1328Q86T90 577 aa21.8■■□□□ 1.08
SHANK3-202ENST00000414786 TXNDC2Q86VQ3 553 aa21.8■■□□□ 1.08
SHANK3-202ENST00000414786 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
SHANK3-202ENST00000414786 ZNF396Q96N95 335 aaPredicted RBP21.8■■□□□ 1.08
SHANK3-202ENST00000414786 UBAC1Q9BSL1 405 aa21.79■■□□□ 1.08
SHANK3-202ENST00000414786 MTHFSP49914 203 aa21.79■■□□□ 1.08
SHANK3-202ENST00000414786 CCDC96Q2M329 555 aa21.79■■□□□ 1.08
SHANK3-202ENST00000414786 WDHD1O75717 1129 aaPredicted RBP21.79■■□□□ 1.08
SHANK3-202ENST00000414786 CDC45O75419 566 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 ARL1P40616 181 aaPredicted RBP21.78■■□□□ 1.08
SHANK3-202ENST00000414786 CWC15Q9P013 229 aaKnown RBP21.78■■□□□ 1.08
SHANK3-202ENST00000414786 ZC3H6P61129 1189 aaKnown RBP21.78■■□□□ 1.08
SHANK3-202ENST00000414786 TERF1P54274 439 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 DDX11Q96FC9 970 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 CBX1P83916 185 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 TSPY26PQ9H489 355 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 SOGA1O94964 1423 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 ERICH4A6NGS2 130 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 EIF5P55010 431 aaKnown RBP21.78■■□□□ 1.08
SHANK3-202ENST00000414786 MMRN2Q9H8L6 949 aa21.78■■□□□ 1.08
SHANK3-202ENST00000414786 PTCD1O75127 700 aaKnown RBP21.77■■□□□ 1.08
SHANK3-202ENST00000414786 CLEC11AQ9Y240 323 aa21.77■■□□□ 1.08
SHANK3-202ENST00000414786 PPP4R3AQ6IN85 833 aa21.77■■□□□ 1.08
SHANK3-202ENST00000414786 BMP2KQ9NSY1 1161 aaPredicted RBP21.77■■□□□ 1.08
SHANK3-202ENST00000414786 PUF60Q9UHX1 559 aaKnown RBP21.77■■□□□ 1.08
SHANK3-202ENST00000414786 DYDC1Q8WWB3 177 aa21.77■■□□□ 1.08
SHANK3-202ENST00000414786 MAP3K9P80192 1104 aa21.76■■□□□ 1.07
SHANK3-202ENST00000414786 SMC1AQ14683 1233 aaKnown RBP21.76■■□□□ 1.07
SHANK3-202ENST00000414786 C11orf95C9JLR9 678 aaPredicted RBP21.76■■□□□ 1.07
SHANK3-202ENST00000414786 CEP63Q96MT8 703 aa21.76■■□□□ 1.07
SHANK3-202ENST00000414786 CCDC39Q9UFE4 941 aa21.76■■□□□ 1.07
SHANK3-202ENST00000414786 SLC4A2P04920 1241 aa21.76■■□□□ 1.07
SHANK3-202ENST00000414786 HOMER2Q9NSB8 354 aa21.76■■□□□ 1.07
SHANK3-202ENST00000414786 KLHL10Q6JEL2 608 aa21.75■■□□□ 1.07
SHANK3-202ENST00000414786 AACSQ86V21 672 aa21.75■■□□□ 1.07
SHANK3-202ENST00000414786 TNMDQ9H2S6 317 aa21.75■■□□□ 1.07
SHANK3-202ENST00000414786 CCDC178Q5BJE1 867 aa21.74■■□□□ 1.07
SHANK3-202ENST00000414786 CWC27Q6UX04 472 aaKnown RBP21.74■■□□□ 1.07
SHANK3-202ENST00000414786 CFAP45Q9UL16 551 aa21.74■■□□□ 1.07
SHANK3-202ENST00000414786 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
SHANK3-202ENST00000414786 CCDC102AQ96A19 550 aa21.74■■□□□ 1.07
SHANK3-202ENST00000414786 HDGFL1Q5TGJ6 251 aa21.74■■□□□ 1.07
SHANK3-202ENST00000414786 BCAR3O75815 825 aa21.74■■□□□ 1.07
SHANK3-202ENST00000414786 TICAM2Q86XR7 235 aa21.73■■□□□ 1.07
SHANK3-202ENST00000414786 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
SHANK3-202ENST00000414786 ZMYND15Q9H091 742 aa21.73■■□□□ 1.07
SHANK3-202ENST00000414786 ZPR1O75312 459 aa21.73■■□□□ 1.07
SHANK3-202ENST00000414786 MAP2K1Q02750 393 aaPredicted RBP21.73■■□□□ 1.07
SHANK3-202ENST00000414786 TSR2Q969E8 191 aaKnown RBP21.73■■□□□ 1.07
SHANK3-202ENST00000414786 MKNK2Q9HBH9 465 aa21.73■■□□□ 1.07
SHANK3-202ENST00000414786 USP8P40818 1118 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 NOL7Q9UMY1 257 aaKnown RBP21.72■■□□□ 1.07
SHANK3-202ENST00000414786 PHLDB1Q86UU1 1377 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 GSTTP1A0A1W2PQM5 241 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 RBM25P49756 843 aaKnown RBP21.72■■□□□ 1.07
SHANK3-202ENST00000414786 CEP57L1Q8IYX8 460 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 VAT1LQ9HCJ6 419 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 FERMT2Q96AC1 680 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 CAMK4Q16566 473 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 TMCO5BA8MYB1 307 aa21.72■■□□□ 1.07
SHANK3-202ENST00000414786 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
SHANK3-202ENST00000414786 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.71■■□□□ 1.07
SHANK3-202ENST00000414786 LUC7LQ9NQ29 371 aaKnown RBP21.71■■□□□ 1.07
SHANK3-202ENST00000414786 MIS18AQ9NYP9 233 aa21.71■■□□□ 1.07
SHANK3-202ENST00000414786 TNIP1Q15025 636 aa21.71■■□□□ 1.07
SHANK3-202ENST00000414786 ZNF530Q6P9A1 599 aaPredicted RBP21.71■■□□□ 1.07
SHANK3-202ENST00000414786 PRKAR2BP31323 418 aa21.71■■□□□ 1.07
SHANK3-202ENST00000414786 JAKMIP3Q5VZ66 844 aa21.71■■□□□ 1.07
SHANK3-202ENST00000414786 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
SHANK3-202ENST00000414786 SEC63Q9UGP8 760 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms