RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
LINC00116-201ENST00000414416 HOXC9P31274 260 aa20.65■□□□□ 0.9
LINC00116-201ENST00000414416 CCDC184Q52MB2 194 aa20.65■□□□□ 0.9
LINC00116-201ENST00000414416 ADAMTS2O95450 1211 aa20.65■□□□□ 0.9
LINC00116-201ENST00000414416 IP6K1Q92551 441 aa20.65■□□□□ 0.9
LINC00116-201ENST00000414416 CHRNA2Q15822 529 aa20.64■□□□□ 0.89
LINC00116-201ENST00000414416 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
LINC00116-201ENST00000414416 HSP90AB2PQ58FF8 381 aa20.63■□□□□ 0.89
LINC00116-201ENST00000414416 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
LINC00116-201ENST00000414416 INSRP06213 1382 aa20.62■□□□□ 0.89
LINC00116-201ENST00000414416 ABCC6O95255 1503 aa20.62■□□□□ 0.89
LINC00116-201ENST00000414416 AXIN2Q9Y2T1 843 aa20.61■□□□□ 0.89
LINC00116-201ENST00000414416 BLMP54132 1417 aaPredicted RBP20.61■□□□□ 0.89
LINC00116-201ENST00000414416 LRP6O75581 1613 aa20.61■□□□□ 0.89
LINC00116-201ENST00000414416 COL18A1P39060 1754 aa20.6■□□□□ 0.89
LINC00116-201ENST00000414416 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
LINC00116-201ENST00000414416 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
LINC00116-201ENST00000414416 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.89
LINC00116-201ENST00000414416 LMO7Q8WWI1 1683 aa20.58■□□□□ 0.89
LINC00116-201ENST00000414416 RGPD5Q99666 1765 aa20.57■□□□□ 0.88
LINC00116-201ENST00000414416 EIF4A2Q14240 407 aaKnown RBP20.57■□□□□ 0.88
LINC00116-201ENST00000414416 MEX3CQ5U5Q3 659 aaKnown RBP20.57■□□□□ 0.88
LINC00116-201ENST00000414416 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
LINC00116-201ENST00000414416 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
LINC00116-201ENST00000414416 C8orf37Q96NL8 207 aa20.56■□□□□ 0.88
LINC00116-201ENST00000414416 IL13P35225 146 aa20.55■□□□□ 0.88
LINC00116-201ENST00000414416 ANKRD24Q8TF21 1146 aa20.55■□□□□ 0.88
LINC00116-201ENST00000414416 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
LINC00116-201ENST00000414416 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
LINC00116-201ENST00000414416 ERBB3P21860 1342 aa20.55■□□□□ 0.88
LINC00116-201ENST00000414416 NGLY1Q96IV0 654 aa20.54■□□□□ 0.88
LINC00116-201ENST00000414416 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
LINC00116-201ENST00000414416 PLCH1Q4KWH8 1693 aa20.53■□□□□ 0.88
LINC00116-201ENST00000414416 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
LINC00116-201ENST00000414416 COL5A2P05997 1499 aaPredicted RBP20.53■□□□□ 0.88
LINC00116-201ENST00000414416 U2SURPO15042 1029 aaKnown RBP20.52■□□□□ 0.88
LINC00116-201ENST00000414416 EVA1CP58658 441 aa20.52■□□□□ 0.88
LINC00116-201ENST00000414416 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
LINC00116-201ENST00000414416 CSB-PGBD3P0DP91 1061 aa20.52■□□□□ 0.87
LINC00116-201ENST00000414416 STRN4Q9NRL3 753 aa20.52■□□□□ 0.87
LINC00116-201ENST00000414416 SLIT2O94813 1529 aa20.51■□□□□ 0.87
LINC00116-201ENST00000414416 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
LINC00116-201ENST00000414416 WDR17Q8IZU2 1322 aa20.49■□□□□ 0.87
LINC00116-201ENST00000414416 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
LINC00116-201ENST00000414416 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC00116-201ENST00000414416 ILDR1Q86SU0 546 aaPredicted RBP20.49■□□□□ 0.87
LINC00116-201ENST00000414416 FNBP4Q8N3X1 1017 aaPredicted RBP20.49■□□□□ 0.87
LINC00116-201ENST00000414416 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
LINC00116-201ENST00000414416 EYA1Q99502 592 aa20.49■□□□□ 0.87
LINC00116-201ENST00000414416 FAM208AQ9UK61 1670 aaKnown RBP20.48■□□□□ 0.87
LINC00116-201ENST00000414416 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
LINC00116-201ENST00000414416 NBPF6Q5VWK0 638 aa20.47■□□□□ 0.87
LINC00116-201ENST00000414416 NBPF4Q96M43 638 aa20.47■□□□□ 0.87
LINC00116-201ENST00000414416 NLRP2Q9NX02 1062 aa20.47■□□□□ 0.87
LINC00116-201ENST00000414416 IGSF1Q8N6C5 1336 aa20.47■□□□□ 0.87
LINC00116-201ENST00000414416 LARP1Q6PKG0 1096 aaKnown RBP20.47■□□□□ 0.87
LINC00116-201ENST00000414416 TOM1L2Q6ZVM7 507 aa20.47■□□□□ 0.87
LINC00116-201ENST00000414416 ADAMTS8Q9UP79 889 aa20.47■□□□□ 0.87
LINC00116-201ENST00000414416 NRAPQ86VF7 1730 aa20.46■□□□□ 0.87
LINC00116-201ENST00000414416 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
LINC00116-201ENST00000414416 UNC5CLQ8IV45 518 aa20.46■□□□□ 0.87
LINC00116-201ENST00000414416 USP21Q9UK80 565 aa20.46■□□□□ 0.87
LINC00116-201ENST00000414416 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
LINC00116-201ENST00000414416 AFF2P51816 1311 aa20.45■□□□□ 0.86
LINC00116-201ENST00000414416 HMOX1P09601 288 aa20.44■□□□□ 0.86
LINC00116-201ENST00000414416 SULT6B1Q6IMI4 303 aa20.44■□□□□ 0.86
LINC00116-201ENST00000414416 USHBP1Q8N6Y0 703 aa20.44■□□□□ 0.86
LINC00116-201ENST00000414416 CRB1P82279 1406 aa20.44■□□□□ 0.86
LINC00116-201ENST00000414416 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
LINC00116-201ENST00000414416 CARD10Q9BWT7 1032 aa20.42■□□□□ 0.86
LINC00116-201ENST00000414416 FCHSD2O94868 740 aa20.42■□□□□ 0.86
LINC00116-201ENST00000414416 KDRP35968 1356 aa20.41■□□□□ 0.86
LINC00116-201ENST00000414416 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.41■□□□□ 0.86
LINC00116-201ENST00000414416 NCAPD2Q15021 1401 aa20.41■□□□□ 0.86
LINC00116-201ENST00000414416 RSPH6AQ9H0K4 717 aa20.41■□□□□ 0.86
LINC00116-201ENST00000414416 USP35Q9P2H5 1018 aa20.41■□□□□ 0.86
LINC00116-201ENST00000414416 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
LINC00116-201ENST00000414416 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
LINC00116-201ENST00000414416 VPS72Q15906 364 aa20.39■□□□□ 0.86
LINC00116-201ENST00000414416 PRKAR2BP31323 418 aa20.39■□□□□ 0.85
LINC00116-201ENST00000414416 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
LINC00116-201ENST00000414416 SPATA31A1Q5TZJ5 1347 aa20.38■□□□□ 0.85
LINC00116-201ENST00000414416 SPATA31A5Q5VU36 1347 aa20.38■□□□□ 0.85
LINC00116-201ENST00000414416 SPATA31A7Q8IWB4 1347 aa20.38■□□□□ 0.85
LINC00116-201ENST00000414416 RAPGEF4Q8WZA2 1011 aa20.36■□□□□ 0.85
LINC00116-201ENST00000414416 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
LINC00116-201ENST00000414416 TRPC5Q9UL62 973 aaPredicted RBP20.36■□□□□ 0.85
LINC00116-201ENST00000414416 NEFMP07197 916 aa20.36■□□□□ 0.85
LINC00116-201ENST00000414416 HNRNPUQ00839 825 aaKnown RBP eCLIP20.36■□□□□ 0.85
LINC00116-201ENST00000414416 TCP11L2Q8N4U5 519 aa20.36■□□□□ 0.85
LINC00116-201ENST00000414416 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
LINC00116-201ENST00000414416 ZNF772Q68DY9 489 aaPredicted RBP20.35■□□□□ 0.85
LINC00116-201ENST00000414416 THRAP3Q9Y2W1 955 aaKnown RBP20.35■□□□□ 0.85
LINC00116-201ENST00000414416 ATRNO75882 1429 aa20.34■□□□□ 0.85
LINC00116-201ENST00000414416 MAPK8IP3Q9UPT6 1336 aa20.34■□□□□ 0.85
LINC00116-201ENST00000414416 QTRT2Q9H974 415 aaKnown RBP20.34■□□□□ 0.85
LINC00116-201ENST00000414416 IL2RBP14784 551 aa20.33■□□□□ 0.85
LINC00116-201ENST00000414416 TATP17735 454 aaPredicted RBP20.33■□□□□ 0.85
LINC00116-201ENST00000414416 MEGF6O75095 1541 aa20.32■□□□□ 0.84
LINC00116-201ENST00000414416 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms