RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 RGPD5Q99666 1765 aa18.53■□□□□ 0.56
SNCAIP-206ENST00000414317 COL5A2P05997 1499 aaPredicted RBP18.52■□□□□ 0.55
SNCAIP-206ENST00000414317 ABCC6O95255 1503 aa18.51■□□□□ 0.55
SNCAIP-206ENST00000414317 RGS12O14924 1447 aa18.51■□□□□ 0.55
SNCAIP-206ENST00000414317 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
SNCAIP-206ENST00000414317 ANKRD26Q9UPS8 1709 aa18.5■□□□□ 0.55
SNCAIP-206ENST00000414317 SPATA31A5Q5VU36 1347 aa18.5■□□□□ 0.55
SNCAIP-206ENST00000414317 SPATA31A7Q8IWB4 1347 aa18.5■□□□□ 0.55
SNCAIP-206ENST00000414317 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
SNCAIP-206ENST00000414317 FBLN1P23142 703 aa18.48■□□□□ 0.55
SNCAIP-206ENST00000414317 LARP1Q6PKG0 1096 aaKnown RBP18.48■□□□□ 0.55
SNCAIP-206ENST00000414317 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
SNCAIP-206ENST00000414317 MAP3K19Q56UN5 1328 aa18.47■□□□□ 0.55
SNCAIP-206ENST00000414317 NSD2O96028 1365 aa18.47■□□□□ 0.55
SNCAIP-206ENST00000414317 FAM98CQ17RN3 349 aaKnown RBP18.46■□□□□ 0.55
SNCAIP-206ENST00000414317 IP6K1Q92551 441 aa18.46■□□□□ 0.55
SNCAIP-206ENST00000414317 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
SNCAIP-206ENST00000414317 CRB1P82279 1406 aa18.46■□□□□ 0.54
SNCAIP-206ENST00000414317 WDR17Q8IZU2 1322 aa18.45■□□□□ 0.54
SNCAIP-206ENST00000414317 SOCS7O14512 581 aa18.45■□□□□ 0.54
SNCAIP-206ENST00000414317 ONECUT3O60422 494 aaPredicted RBP18.45■□□□□ 0.54
SNCAIP-206ENST00000414317 AMPHP49418 695 aa18.45■□□□□ 0.54
SNCAIP-206ENST00000414317 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
SNCAIP-206ENST00000414317 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
SNCAIP-206ENST00000414317 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
SNCAIP-206ENST00000414317 BLMP54132 1417 aaPredicted RBP18.44■□□□□ 0.54
SNCAIP-206ENST00000414317 TOM1L2Q6ZVM7 507 aa18.44■□□□□ 0.54
SNCAIP-206ENST00000414317 A0A0G2JS52 829 aa18.43■□□□□ 0.54
SNCAIP-206ENST00000414317 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
SNCAIP-206ENST00000414317 MYT1Q01538 1121 aa18.43■□□□□ 0.54
SNCAIP-206ENST00000414317 SEPT12Q8IYM1 358 aa18.43■□□□□ 0.54
SNCAIP-206ENST00000414317 RTL1A6NKG5 1358 aa18.43■□□□□ 0.54
SNCAIP-206ENST00000414317 BRWD3Q6RI45 1802 aa18.43■□□□□ 0.54
SNCAIP-206ENST00000414317 HOXC9P31274 260 aa18.42■□□□□ 0.54
SNCAIP-206ENST00000414317 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
SNCAIP-206ENST00000414317 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
SNCAIP-206ENST00000414317 ERBB3P21860 1342 aa18.42■□□□□ 0.54
SNCAIP-206ENST00000414317 ANKRD24Q8TF21 1146 aa18.42■□□□□ 0.54
SNCAIP-206ENST00000414317 THRAP3Q9Y2W1 955 aaKnown RBP18.42■□□□□ 0.54
SNCAIP-206ENST00000414317 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
SNCAIP-206ENST00000414317 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
SNCAIP-206ENST00000414317 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
SNCAIP-206ENST00000414317 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
SNCAIP-206ENST00000414317 CARD10Q9BWT7 1032 aa18.4■□□□□ 0.54
SNCAIP-206ENST00000414317 THSD7AQ9UPZ6 1657 aa18.4■□□□□ 0.54
SNCAIP-206ENST00000414317 PEAK1Q9H792 1746 aa18.39■□□□□ 0.53
SNCAIP-206ENST00000414317 FLT4P35916 1363 aa18.39■□□□□ 0.53
SNCAIP-206ENST00000414317 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-206ENST00000414317 LTV1Q96GA3 475 aaPredicted RBP18.38■□□□□ 0.53
SNCAIP-206ENST00000414317 EMILIN1Q9Y6C2 1016 aa18.38■□□□□ 0.53
SNCAIP-206ENST00000414317 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
SNCAIP-206ENST00000414317 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-206ENST00000414317 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-206ENST00000414317 POLKQ9UBT6 870 aa18.37■□□□□ 0.53
SNCAIP-206ENST00000414317 WNK3Q9BYP7 1800 aa18.36■□□□□ 0.53
SNCAIP-206ENST00000414317 INSRP06213 1382 aa18.36■□□□□ 0.53
SNCAIP-206ENST00000414317 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
SNCAIP-206ENST00000414317 HSP90AB2PQ58FF8 381 aa18.36■□□□□ 0.53
SNCAIP-206ENST00000414317 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
SNCAIP-206ENST00000414317 EP400Q96L91 3159 aa18.35■□□□□ 0.53
SNCAIP-206ENST00000414317 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-206ENST00000414317 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
SNCAIP-206ENST00000414317 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-206ENST00000414317 CDCA7Q9BWT1 371 aaPredicted RBP18.34■□□□□ 0.53
SNCAIP-206ENST00000414317 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
SNCAIP-206ENST00000414317 PDE3BQ13370 1112 aa18.31■□□□□ 0.52
SNCAIP-206ENST00000414317 DISP2A7MBM2 1401 aa18.3■□□□□ 0.52
SNCAIP-206ENST00000414317 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
SNCAIP-206ENST00000414317 DDB1Q16531 1140 aa18.3■□□□□ 0.52
SNCAIP-206ENST00000414317 NBPF6Q5VWK0 638 aa18.3■□□□□ 0.52
SNCAIP-206ENST00000414317 UPF1Q92900 1129 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNCAIP-206ENST00000414317 NBPF4Q96M43 638 aa18.3■□□□□ 0.52
SNCAIP-206ENST00000414317 IL2RBP14784 551 aa18.29■□□□□ 0.52
SNCAIP-206ENST00000414317 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
SNCAIP-206ENST00000414317 FAM182BQ5T319 152 aa18.27■□□□□ 0.52
SNCAIP-206ENST00000414317 EXOC5O00471 708 aa18.26■□□□□ 0.51
SNCAIP-206ENST00000414317 MTHFSP49914 203 aa18.25■□□□□ 0.51
SNCAIP-206ENST00000414317 USHBP1Q8N6Y0 703 aa18.25■□□□□ 0.51
SNCAIP-206ENST00000414317 EIF4A2Q14240 407 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-206ENST00000414317 FAM196AQ6ZSG2 479 aa18.24■□□□□ 0.51
SNCAIP-206ENST00000414317 TNS2Q63HR2 1409 aa18.24■□□□□ 0.51
SNCAIP-206ENST00000414317 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
SNCAIP-206ENST00000414317 EYA1Q99502 592 aa18.23■□□□□ 0.51
SNCAIP-206ENST00000414317 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
SNCAIP-206ENST00000414317 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
SNCAIP-206ENST00000414317 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
SNCAIP-206ENST00000414317 MEGF6O75095 1541 aa18.21■□□□□ 0.51
SNCAIP-206ENST00000414317 NCAPD2Q15021 1401 aa18.21■□□□□ 0.51
SNCAIP-206ENST00000414317 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
SNCAIP-206ENST00000414317 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
SNCAIP-206ENST00000414317 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 PPP2R1AP30153 589 aa18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 IL13P35225 146 aa18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 SF3B2Q13435 895 aaKnown RBP18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 ZCRB1Q8TBF4 217 aaKnown RBP18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 IGSF1Q8N6C5 1336 aa18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 KAT6BQ8WYB5 2073 aa18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 SBF2Q86WG5 1849 aa18.18■□□□□ 0.5
SNCAIP-206ENST00000414317 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
SNCAIP-206ENST00000414317 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms