RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
HDAC9-206ENST00000413380 ARHGEF25Q86VW2 580 aa15.67■□□□□ 0.1
HDAC9-206ENST00000413380 RGPD5Q99666 1765 aa15.67■□□□□ 0.1
HDAC9-206ENST00000413380 MAP3K19Q56UN5 1328 aa15.67■□□□□ 0.1
HDAC9-206ENST00000413380 FLT4P35916 1363 aa15.66■□□□□ 0.1
HDAC9-206ENST00000413380 MTHFSP49914 203 aa15.66■□□□□ 0.1
HDAC9-206ENST00000413380 CNGB1Q14028 1251 aaPredicted RBP15.66■□□□□ 0.1
HDAC9-206ENST00000413380 FBXO41Q8TF61 875 aa15.66■□□□□ 0.1
HDAC9-206ENST00000413380 COL14A1Q05707 1796 aaKnown RBP15.66■□□□□ 0.1
HDAC9-206ENST00000413380 RGPD1P0DJD0 1748 aa15.65■□□□□ 0.1
HDAC9-206ENST00000413380 FAM208AQ9UK61 1670 aaKnown RBP15.65■□□□□ 0.1
HDAC9-206ENST00000413380 FBLN1P23142 703 aa15.65■□□□□ 0.1
HDAC9-206ENST00000413380 HSPA1LP34931 641 aa15.65■□□□□ 0.1
HDAC9-206ENST00000413380 TNNT2P45379 298 aaPredicted RBP15.65■□□□□ 0.1
HDAC9-206ENST00000413380 EMILIN1Q9Y6C2 1016 aa15.65■□□□□ 0.1
HDAC9-206ENST00000413380 BLMP54132 1417 aaPredicted RBP15.65■□□□□ 0.1
HDAC9-206ENST00000413380 RRS1Q15050 365 aaKnown RBP15.64■□□□□ 0.09
HDAC9-206ENST00000413380 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
HDAC9-206ENST00000413380 SPATA31A6Q5VVP1 1343 aa15.64■□□□□ 0.09
HDAC9-206ENST00000413380 CAMTA1Q9Y6Y1 1673 aa15.63■□□□□ 0.09
HDAC9-206ENST00000413380 NWD2Q9ULI1 1742 aa15.63■□□□□ 0.09
HDAC9-206ENST00000413380 KIAA0232Q92628 1395 aa15.62■□□□□ 0.09
HDAC9-206ENST00000413380 CAPN15O75808 1086 aa15.62■□□□□ 0.09
HDAC9-206ENST00000413380 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
HDAC9-206ENST00000413380 IP6K1Q92551 441 aa15.62■□□□□ 0.09
HDAC9-206ENST00000413380 PLCH1Q4KWH8 1693 aa15.62■□□□□ 0.09
HDAC9-206ENST00000413380 HOXC9P31274 260 aa15.61■□□□□ 0.09
HDAC9-206ENST00000413380 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
HDAC9-206ENST00000413380 NRAPQ86VF7 1730 aa15.6■□□□□ 0.09
HDAC9-206ENST00000413380 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
HDAC9-206ENST00000413380 LRP6O75581 1613 aa15.59■□□□□ 0.09
HDAC9-206ENST00000413380 SOX12O15370 315 aa15.59■□□□□ 0.09
HDAC9-206ENST00000413380 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
HDAC9-206ENST00000413380 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.59■□□□□ 0.09
HDAC9-206ENST00000413380 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
HDAC9-206ENST00000413380 NCAPD2Q15021 1401 aa15.59■□□□□ 0.09
HDAC9-206ENST00000413380 ZC3H6P61129 1189 aaKnown RBP15.58■□□□□ 0.08
HDAC9-206ENST00000413380 PNISRQ8TF01 805 aaKnown RBP15.58■□□□□ 0.08
HDAC9-206ENST00000413380 AMPHP49418 695 aa15.57■□□□□ 0.08
HDAC9-206ENST00000413380 HSP90AB2PQ58FF8 381 aa15.57■□□□□ 0.08
HDAC9-206ENST00000413380 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
HDAC9-206ENST00000413380 COL5A2P05997 1499 aaPredicted RBP15.57■□□□□ 0.08
HDAC9-206ENST00000413380 SLIT2O94813 1529 aa15.57■□□□□ 0.08
HDAC9-206ENST00000413380 DIAPH1O60610 1272 aaKnown RBP15.56■□□□□ 0.08
HDAC9-206ENST00000413380 IL13P35225 146 aa15.56■□□□□ 0.08
HDAC9-206ENST00000413380 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
HDAC9-206ENST00000413380 PRDM11Q9NQV5 511 aa15.56■□□□□ 0.08
HDAC9-206ENST00000413380 ERBB3P21860 1342 aa15.55■□□□□ 0.08
HDAC9-206ENST00000413380 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
HDAC9-206ENST00000413380 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
HDAC9-206ENST00000413380 KDRP35968 1356 aa15.54■□□□□ 0.08
HDAC9-206ENST00000413380 FAM83GA6ND36 823 aa15.54■□□□□ 0.08
HDAC9-206ENST00000413380 PPM1GO15355 546 aaPredicted RBP15.54■□□□□ 0.08
HDAC9-206ENST00000413380 IGSF1Q8N6C5 1336 aa15.53■□□□□ 0.08
HDAC9-206ENST00000413380 PLEKHG2Q9H7P9 1386 aa15.52■□□□□ 0.08
HDAC9-206ENST00000413380 CHRNA2Q15822 529 aa15.52■□□□□ 0.08
HDAC9-206ENST00000413380 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
HDAC9-206ENST00000413380 WNK3Q9BYP7 1800 aa15.52■□□□□ 0.07
HDAC9-206ENST00000413380 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
HDAC9-206ENST00000413380 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
HDAC9-206ENST00000413380 FNBP4Q8N3X1 1017 aaPredicted RBP15.5■□□□□ 0.07
HDAC9-206ENST00000413380 ANKRD24Q8TF21 1146 aa15.5■□□□□ 0.07
HDAC9-206ENST00000413380 ADAMTS2O95450 1211 aa15.49■□□□□ 0.07
HDAC9-206ENST00000413380 BCL9LQ86UU0 1499 aa15.48■□□□□ 0.07
HDAC9-206ENST00000413380 NUTM2BA6NNL0 878 aaPredicted RBP15.48■□□□□ 0.07
HDAC9-206ENST00000413380 NUTM2EB1AL46 878 aaPredicted RBP15.48■□□□□ 0.07
HDAC9-206ENST00000413380 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
HDAC9-206ENST00000413380 NUTM2AQ8IVF1 878 aaPredicted RBP15.48■□□□□ 0.07
HDAC9-206ENST00000413380 EYA1Q99502 592 aa15.48■□□□□ 0.07
HDAC9-206ENST00000413380 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
HDAC9-206ENST00000413380 CRB1P82279 1406 aa15.48■□□□□ 0.07
HDAC9-206ENST00000413380 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
HDAC9-206ENST00000413380 FCHSD2O94868 740 aa15.47■□□□□ 0.07
HDAC9-206ENST00000413380 BTG4Q9NY30 223 aa15.47■□□□□ 0.07
HDAC9-206ENST00000413380 PARP4Q9UKK3 1724 aaKnown RBP15.47■□□□□ 0.07
HDAC9-206ENST00000413380 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.07
HDAC9-206ENST00000413380 NBPF6Q5VWK0 638 aa15.46■□□□□ 0.07
HDAC9-206ENST00000413380 NBPF4Q96M43 638 aa15.46■□□□□ 0.07
HDAC9-206ENST00000413380 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
HDAC9-206ENST00000413380 U2SURPO15042 1029 aaKnown RBP15.45■□□□□ 0.06
HDAC9-206ENST00000413380 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
HDAC9-206ENST00000413380 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
HDAC9-206ENST00000413380 CARD10Q9BWT7 1032 aa15.45■□□□□ 0.06
HDAC9-206ENST00000413380 DLG5Q8TDM6 1919 aa15.45■□□□□ 0.06
HDAC9-206ENST00000413380 FAM9BQ8IZU0 186 aa15.44■□□□□ 0.06
HDAC9-206ENST00000413380 LTV1Q96GA3 475 aaPredicted RBP15.44■□□□□ 0.06
HDAC9-206ENST00000413380 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
HDAC9-206ENST00000413380 DSG3P32926 999 aa15.43■□□□□ 0.06
HDAC9-206ENST00000413380 SULT6B1Q6IMI4 303 aa15.43■□□□□ 0.06
HDAC9-206ENST00000413380 UNC5CLQ8IV45 518 aa15.43■□□□□ 0.06
HDAC9-206ENST00000413380 PNNQ9H307 717 aaKnown RBP15.43■□□□□ 0.06
HDAC9-206ENST00000413380 SHANK3Q9BYB0 1731 aa15.43■□□□□ 0.06
HDAC9-206ENST00000413380 DISP2A7MBM2 1401 aa15.43■□□□□ 0.06
HDAC9-206ENST00000413380 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
HDAC9-206ENST00000413380 AEBP1Q8IUX7 1158 aa15.42■□□□□ 0.06
HDAC9-206ENST00000413380 NGLY1Q96IV0 654 aa15.42■□□□□ 0.06
HDAC9-206ENST00000413380 C8orf37Q96NL8 207 aa15.42■□□□□ 0.06
HDAC9-206ENST00000413380 RUNDC1Q96C34 613 aa15.41■□□□□ 0.06
HDAC9-206ENST00000413380 MEGF6O75095 1541 aa15.41■□□□□ 0.06
HDAC9-206ENST00000413380 ATRNO75882 1429 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms