RNA–Protein interactions for RNA: ENST00000413233.1

TPM3P1-201, Transcript of tropomyosin 3 pseudogene 1, humanhuman

BASIC

Gene TPM3P1, Length 747 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P1-201ENST00000413233 PRKRIP1Q9H875 184 aaPredicted RBP13.1□□□□□ -0.31
TPM3P1-201ENST00000413233 SLIT3O75094 1523 aa13.09□□□□□ -0.31
TPM3P1-201ENST00000413233 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
TPM3P1-201ENST00000413233 NLRP6P59044 892 aa13.09□□□□□ -0.31
TPM3P1-201ENST00000413233 SF3B2Q13435 895 aaKnown RBP13.09□□□□□ -0.31
TPM3P1-201ENST00000413233 ANKRD26Q9UPS8 1709 aa13.09□□□□□ -0.31
TPM3P1-201ENST00000413233 SLIT2O94813 1529 aa13.08□□□□□ -0.31
TPM3P1-201ENST00000413233 ABCC6O95255 1503 aa13.08□□□□□ -0.31
TPM3P1-201ENST00000413233 MORC1Q86VD1 984 aa13.08□□□□□ -0.32
TPM3P1-201ENST00000413233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
TPM3P1-201ENST00000413233 KIF20BQ96Q89 1820 aa13.08□□□□□ -0.32
TPM3P1-201ENST00000413233 PIK3C2AO00443 1686 aa13.08□□□□□ -0.32
TPM3P1-201ENST00000413233 CPDO75976 1380 aa13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 NME9Q86XW9 330 aa13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 UNC5CLQ8IV45 518 aa13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 PLCH1Q4KWH8 1693 aa13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 INSRP06213 1382 aa13.07□□□□□ -0.32
TPM3P1-201ENST00000413233 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
TPM3P1-201ENST00000413233 GCP02774 474 aa13.06□□□□□ -0.32
TPM3P1-201ENST00000413233 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
TPM3P1-201ENST00000413233 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
TPM3P1-201ENST00000413233 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
TPM3P1-201ENST00000413233 PHRF1Q9P1Y6 1649 aaKnown RBP13.04□□□□□ -0.32
TPM3P1-201ENST00000413233 CCER2I3L3R5 266 aa13.04□□□□□ -0.32
TPM3P1-201ENST00000413233 CC2D1BQ5T0F9 858 aaKnown RBP13.04□□□□□ -0.32
TPM3P1-201ENST00000413233 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
TPM3P1-201ENST00000413233 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
TPM3P1-201ENST00000413233 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
TPM3P1-201ENST00000413233 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
TPM3P1-201ENST00000413233 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
TPM3P1-201ENST00000413233 NFAT5O94916 1531 aa13.02□□□□□ -0.33
TPM3P1-201ENST00000413233 PPP2R1AP30153 589 aa13.01□□□□□ -0.33
TPM3P1-201ENST00000413233 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
TPM3P1-201ENST00000413233 POLKQ9UBT6 870 aa13.01□□□□□ -0.33
TPM3P1-201ENST00000413233 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
TPM3P1-201ENST00000413233 FLT4P35916 1363 aa13□□□□□ -0.33
TPM3P1-201ENST00000413233 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
TPM3P1-201ENST00000413233 BAG6P46379 1132 aa13□□□□□ -0.33
TPM3P1-201ENST00000413233 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
TPM3P1-201ENST00000413233 CFAP53Q96M91 514 aa13□□□□□ -0.33
TPM3P1-201ENST00000413233 VPS72Q15906 364 aa12.99□□□□□ -0.33
TPM3P1-201ENST00000413233 IP6K1Q92551 441 aa12.99□□□□□ -0.33
TPM3P1-201ENST00000413233 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
TPM3P1-201ENST00000413233 NRAPQ86VF7 1730 aa12.98□□□□□ -0.33
TPM3P1-201ENST00000413233 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
TPM3P1-201ENST00000413233 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
TPM3P1-201ENST00000413233 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
TPM3P1-201ENST00000413233 MTHFSP49914 203 aa12.97□□□□□ -0.33
TPM3P1-201ENST00000413233 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
TPM3P1-201ENST00000413233 A0A0G2JS52 829 aa12.96□□□□□ -0.33
TPM3P1-201ENST00000413233 ABCB7O75027 752 aa12.96□□□□□ -0.33
TPM3P1-201ENST00000413233 MYT1Q01538 1121 aa12.96□□□□□ -0.33
TPM3P1-201ENST00000413233 R3HDM1Q15032 1099 aaKnown RBP12.96□□□□□ -0.33
TPM3P1-201ENST00000413233 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
TPM3P1-201ENST00000413233 AMPHP49418 695 aa12.95□□□□□ -0.34
TPM3P1-201ENST00000413233 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
TPM3P1-201ENST00000413233 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
TPM3P1-201ENST00000413233 NUDCQ9Y266 331 aa12.95□□□□□ -0.34
TPM3P1-201ENST00000413233 HOXC9P31274 260 aa12.94□□□□□ -0.34
TPM3P1-201ENST00000413233 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
TPM3P1-201ENST00000413233 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
TPM3P1-201ENST00000413233 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
TPM3P1-201ENST00000413233 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
TPM3P1-201ENST00000413233 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
TPM3P1-201ENST00000413233 YY1P25490 414 aa12.93□□□□□ -0.34
TPM3P1-201ENST00000413233 COL14A1Q05707 1796 aaKnown RBP12.93□□□□□ -0.34
TPM3P1-201ENST00000413233 MAP2P11137 1827 aaKnown RBP12.92□□□□□ -0.34
TPM3P1-201ENST00000413233 RRS1Q15050 365 aaKnown RBP12.92□□□□□ -0.34
TPM3P1-201ENST00000413233 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
TPM3P1-201ENST00000413233 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
TPM3P1-201ENST00000413233 ERBB3P21860 1342 aa12.91□□□□□ -0.34
TPM3P1-201ENST00000413233 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
TPM3P1-201ENST00000413233 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
TPM3P1-201ENST00000413233 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
TPM3P1-201ENST00000413233 LMO7Q8WWI1 1683 aa12.91□□□□□ -0.34
TPM3P1-201ENST00000413233 COL18A1P39060 1754 aa12.91□□□□□ -0.34
TPM3P1-201ENST00000413233 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
TPM3P1-201ENST00000413233 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
TPM3P1-201ENST00000413233 IL13P35225 146 aa12.9□□□□□ -0.34
TPM3P1-201ENST00000413233 ZC3H6P61129 1189 aaKnown RBP12.9□□□□□ -0.34
TPM3P1-201ENST00000413233 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 LTN1O94822 1766 aa12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 FAM83GA6ND36 823 aa12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 FCHSD2O94868 740 aa12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 EZH2Q15910 746 aaKnown RBP12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 MIER1Q8N108 512 aa12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 THRAP3Q9Y2W1 955 aaKnown RBP12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 RREB1Q92766 1687 aa12.89□□□□□ -0.35
TPM3P1-201ENST00000413233 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 HSP90AB2PQ58FF8 381 aa12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
TPM3P1-201ENST00000413233 KDRP35968 1356 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms