RNA–Protein interactions for RNA: ENST00000412759.2

SRGAP2C-203, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-203ENST00000412759 BCL11BQ9C0K0 894 aaPredicted RBP22.5■■□□□ 1.19
SRGAP2C-203ENST00000412759 OVOS2A0A0G2JMS6 1433 aa22.49■■□□□ 1.19
SRGAP2C-203ENST00000412759 OVOS2A0A0J9YW53 1432 aa22.49■■□□□ 1.19
SRGAP2C-203ENST00000412759 OVOS2Q6IE36 1432 aa22.49■■□□□ 1.19
SRGAP2C-203ENST00000412759 CARD10Q9BWT7 1032 aa22.49■■□□□ 1.19
SRGAP2C-203ENST00000412759 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
SRGAP2C-203ENST00000412759 TNS1Q9HBL0 1735 aaKnown RBP22.48■■□□□ 1.19
SRGAP2C-203ENST00000412759 EXOC5O00471 708 aa22.48■■□□□ 1.19
SRGAP2C-203ENST00000412759 SPON1Q9HCB6 807 aa22.48■■□□□ 1.19
SRGAP2C-203ENST00000412759 SOX12O15370 315 aa22.47■■□□□ 1.19
SRGAP2C-203ENST00000412759 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
SRGAP2C-203ENST00000412759 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
SRGAP2C-203ENST00000412759 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
SRGAP2C-203ENST00000412759 KTN1Q86UP2 1357 aaKnown RBP22.46■■□□□ 1.19
SRGAP2C-203ENST00000412759 SLIT3O75094 1523 aa22.46■■□□□ 1.19
SRGAP2C-203ENST00000412759 KCNQ2O43526 872 aa22.45■■□□□ 1.18
SRGAP2C-203ENST00000412759 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
SRGAP2C-203ENST00000412759 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
SRGAP2C-203ENST00000412759 HDGFL2Q7Z4V5 671 aaPredicted RBP22.41■■□□□ 1.18
SRGAP2C-203ENST00000412759 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.41■■□□□ 1.18
SRGAP2C-203ENST00000412759 TESK2Q96S53 571 aa22.41■■□□□ 1.18
SRGAP2C-203ENST00000412759 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
SRGAP2C-203ENST00000412759 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
SRGAP2C-203ENST00000412759 PARP4Q9UKK3 1724 aaKnown RBP22.4■■□□□ 1.18
SRGAP2C-203ENST00000412759 CCDC7Q96M83 1385 aa22.39■■□□□ 1.18
SRGAP2C-203ENST00000412759 SLC12A5Q9H2X9 1139 aa22.39■■□□□ 1.17
SRGAP2C-203ENST00000412759 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.17
SRGAP2C-203ENST00000412759 AKAP12Q02952 1782 aa22.39■■□□□ 1.17
SRGAP2C-203ENST00000412759 BCL9O00512 1426 aa22.39■■□□□ 1.17
SRGAP2C-203ENST00000412759 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
SRGAP2C-203ENST00000412759 PIK3C2AO00443 1686 aa22.36■■□□□ 1.17
SRGAP2C-203ENST00000412759 NLRP2Q9NX02 1062 aa22.36■■□□□ 1.17
SRGAP2C-203ENST00000412759 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
SRGAP2C-203ENST00000412759 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
SRGAP2C-203ENST00000412759 PTF1AQ7RTS3 328 aa22.34■■□□□ 1.17
SRGAP2C-203ENST00000412759 PROM2Q8N271 834 aa22.34■■□□□ 1.17
SRGAP2C-203ENST00000412759 STK32BQ9NY57 414 aa22.34■■□□□ 1.17
SRGAP2C-203ENST00000412759 TXNRD1Q16881 649 aa22.33■■□□□ 1.17
SRGAP2C-203ENST00000412759 RREB1Q92766 1687 aa22.33■■□□□ 1.16
SRGAP2C-203ENST00000412759 IL2RBP14784 551 aa22.32■■□□□ 1.16
SRGAP2C-203ENST00000412759 NME9Q86XW9 330 aa22.32■■□□□ 1.16
SRGAP2C-203ENST00000412759 COL18A1P39060 1754 aa22.32■■□□□ 1.16
SRGAP2C-203ENST00000412759 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
SRGAP2C-203ENST00000412759 PCGF6Q9BYE7 350 aa22.31■■□□□ 1.16
SRGAP2C-203ENST00000412759 YY1P25490 414 aa22.3■■□□□ 1.16
SRGAP2C-203ENST00000412759 TMF1P82094 1093 aa22.3■■□□□ 1.16
SRGAP2C-203ENST00000412759 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
SRGAP2C-203ENST00000412759 MON2Q7Z3U7 1717 aa22.3■■□□□ 1.16
SRGAP2C-203ENST00000412759 ERBB3P21860 1342 aa22.3■■□□□ 1.16
SRGAP2C-203ENST00000412759 PEAK1Q9H792 1746 aa22.29■■□□□ 1.16
SRGAP2C-203ENST00000412759 ANKRD24Q8TF21 1146 aa22.29■■□□□ 1.16
SRGAP2C-203ENST00000412759 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
SRGAP2C-203ENST00000412759 LRRC37A3O60309 1634 aa22.28■■□□□ 1.16
SRGAP2C-203ENST00000412759 ABCC6O95255 1503 aa22.28■■□□□ 1.16
SRGAP2C-203ENST00000412759 SLC15A2Q16348 729 aa22.28■■□□□ 1.16
SRGAP2C-203ENST00000412759 A0A1W2PP64 1363 aa22.27■■□□□ 1.16
SRGAP2C-203ENST00000412759 USP47Q96K76 1375 aa22.27■■□□□ 1.16
SRGAP2C-203ENST00000412759 NFAT5O94916 1531 aa22.27■■□□□ 1.16
SRGAP2C-203ENST00000412759 CDCA8Q53HL2 280 aa22.27■■□□□ 1.16
SRGAP2C-203ENST00000412759 ZBTB7AO95365 584 aa22.26■■□□□ 1.15
SRGAP2C-203ENST00000412759 USP54Q70EL1 1684 aa22.24■■□□□ 1.15
SRGAP2C-203ENST00000412759 IP6K1Q92551 441 aa22.24■■□□□ 1.15
SRGAP2C-203ENST00000412759 ACSBG1Q96GR2 724 aa22.24■■□□□ 1.15
SRGAP2C-203ENST00000412759 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
SRGAP2C-203ENST00000412759 RGPD3A6NKT7 1758 aaPredicted RBP22.23■■□□□ 1.15
SRGAP2C-203ENST00000412759 RGPD4Q7Z3J3 1758 aa22.23■■□□□ 1.15
SRGAP2C-203ENST00000412759 ATF5Q9Y2D1 282 aaPredicted RBP22.23■■□□□ 1.15
SRGAP2C-203ENST00000412759 COG3Q96JB2 828 aa22.22■■□□□ 1.15
SRGAP2C-203ENST00000412759 PDGFDQ9GZP0 370 aaPredicted RBP22.22■■□□□ 1.15
SRGAP2C-203ENST00000412759 MTFR1LQ9H019 292 aa22.22■■□□□ 1.15
SRGAP2C-203ENST00000412759 ANKRD36BQ8N2N9 1353 aa22.21■■□□□ 1.15
SRGAP2C-203ENST00000412759 SBF2Q86WG5 1849 aa22.2■■□□□ 1.14
SRGAP2C-203ENST00000412759 PTGER2P43116 358 aa22.19■■□□□ 1.14
SRGAP2C-203ENST00000412759 DDX54Q8TDD1 881 aaKnown RBP22.19■■□□□ 1.14
SRGAP2C-203ENST00000412759 AMPHP49418 695 aa22.18■■□□□ 1.14
SRGAP2C-203ENST00000412759 LTV1Q96GA3 475 aaPredicted RBP22.18■■□□□ 1.14
SRGAP2C-203ENST00000412759 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
SRGAP2C-203ENST00000412759 SLC27A3Q5K4L6 730 aa22.15■■□□□ 1.14
SRGAP2C-203ENST00000412759 FYB1O15117 783 aa22.14■■□□□ 1.13
SRGAP2C-203ENST00000412759 CCER1Q8TC90 406 aaPredicted RBP22.14■■□□□ 1.13
SRGAP2C-203ENST00000412759 SYT17Q9BSW7 474 aa22.14■■□□□ 1.13
SRGAP2C-203ENST00000412759 FHDC1Q9C0D6 1143 aaPredicted RBP22.13■■□□□ 1.13
SRGAP2C-203ENST00000412759 WNK3Q9BYP7 1800 aa22.13■■□□□ 1.13
SRGAP2C-203ENST00000412759 HOXC9P31274 260 aa22.12■■□□□ 1.13
SRGAP2C-203ENST00000412759 ARXQ96QS3 562 aa22.12■■□□□ 1.13
SRGAP2C-203ENST00000412759 MAP3K19Q56UN5 1328 aa22.11■■□□□ 1.13
SRGAP2C-203ENST00000412759 ZCRB1Q8TBF4 217 aaKnown RBP22.11■■□□□ 1.13
SRGAP2C-203ENST00000412759 SLC16A10Q8TF71 515 aa22.11■■□□□ 1.13
SRGAP2C-203ENST00000412759 SYTL4Q96C24 671 aaPredicted RBP22.11■■□□□ 1.13
SRGAP2C-203ENST00000412759 HMGB2P26583 209 aaKnown RBP22.09■■□□□ 1.13
SRGAP2C-203ENST00000412759 PRIM1P49642 420 aaKnown RBP22.09■■□□□ 1.13
SRGAP2C-203ENST00000412759 SGIP1Q9BQI5 828 aa22.09■■□□□ 1.13
SRGAP2C-203ENST00000412759 LRRC4BQ9NT99 713 aa22.09■■□□□ 1.13
SRGAP2C-203ENST00000412759 LTN1O94822 1766 aa22.08■■□□□ 1.13
SRGAP2C-203ENST00000412759 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
SRGAP2C-203ENST00000412759 CASZ1Q86V15 1759 aa22.07■■□□□ 1.12
SRGAP2C-203ENST00000412759 GGNBP2Q9H3C7 697 aa22.07■■□□□ 1.12
SRGAP2C-203ENST00000412759 TFCP2L1Q9NZI6 479 aa22.07■■□□□ 1.12
SRGAP2C-203ENST00000412759 POLD1P28340 1107 aa22.06■■□□□ 1.12
SRGAP2C-203ENST00000412759 EIF4G2P78344 907 aaKnown RBP eCLIP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms