RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 RGPD1P0DJD0 1748 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 SOX12O15370 315 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 NME9Q86XW9 330 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 TIMELESSQ9UNS1 1208 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 AXIN2Q9Y2T1 843 aa14.29□□□□□ -0.12
LINC01643-201ENST00000412218 PARP4Q9UKK3 1724 aaKnown RBP14.29□□□□□ -0.12
LINC01643-201ENST00000412218 DISP2A7MBM2 1401 aa14.28□□□□□ -0.12
LINC01643-201ENST00000412218 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
LINC01643-201ENST00000412218 TNS1Q9HBL0 1735 aaKnown RBP14.28□□□□□ -0.12
LINC01643-201ENST00000412218 OVOS2A0A0J9YW53 1432 aa14.27□□□□□ -0.12
LINC01643-201ENST00000412218 OVOS2Q6IE36 1432 aa14.27□□□□□ -0.12
LINC01643-201ENST00000412218 BAG6P46379 1132 aa14.27□□□□□ -0.13
LINC01643-201ENST00000412218 LRRC37A3O60309 1634 aa14.26□□□□□ -0.13
LINC01643-201ENST00000412218 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
LINC01643-201ENST00000412218 TOM1L2Q6ZVM7 507 aa14.26□□□□□ -0.13
LINC01643-201ENST00000412218 TMF1P82094 1093 aa14.25□□□□□ -0.13
LINC01643-201ENST00000412218 PDE3BQ13370 1112 aa14.25□□□□□ -0.13
LINC01643-201ENST00000412218 WNK3Q9BYP7 1800 aa14.25□□□□□ -0.13
LINC01643-201ENST00000412218 ANKRD36BQ8N2N9 1353 aa14.24□□□□□ -0.13
LINC01643-201ENST00000412218 PEAK1Q9H792 1746 aa14.22□□□□□ -0.13
LINC01643-201ENST00000412218 TRIM37O94972 964 aa14.22□□□□□ -0.13
LINC01643-201ENST00000412218 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
LINC01643-201ENST00000412218 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
LINC01643-201ENST00000412218 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
LINC01643-201ENST00000412218 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
LINC01643-201ENST00000412218 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
LINC01643-201ENST00000412218 ERBB3P21860 1342 aa14.21□□□□□ -0.13
LINC01643-201ENST00000412218 LTN1O94822 1766 aa14.21□□□□□ -0.13
LINC01643-201ENST00000412218 CCDC7Q96M83 1385 aa14.21□□□□□ -0.14
LINC01643-201ENST00000412218 DDB1Q16531 1140 aa14.2□□□□□ -0.14
LINC01643-201ENST00000412218 CDCA7Q9BWT1 371 aaPredicted RBP14.2□□□□□ -0.14
LINC01643-201ENST00000412218 PARD3Q8TEW0 1356 aa14.2□□□□□ -0.14
LINC01643-201ENST00000412218 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
LINC01643-201ENST00000412218 CDCA8Q53HL2 280 aa14.19□□□□□ -0.14
LINC01643-201ENST00000412218 MYOM1P52179 1685 aa14.19□□□□□ -0.14
LINC01643-201ENST00000412218 APBA3O96018 575 aa14.18□□□□□ -0.14
LINC01643-201ENST00000412218 EZH2Q15910 746 aaKnown RBP14.18□□□□□ -0.14
LINC01643-201ENST00000412218 COG3Q96JB2 828 aa14.18□□□□□ -0.14
LINC01643-201ENST00000412218 CAMKK2Q96RR4 588 aa14.18□□□□□ -0.14
LINC01643-201ENST00000412218 BCL9O00512 1426 aa14.17□□□□□ -0.14
LINC01643-201ENST00000412218 TNS2Q63HR2 1409 aa14.17□□□□□ -0.14
LINC01643-201ENST00000412218 ANKRD24Q8TF21 1146 aa14.17□□□□□ -0.14
LINC01643-201ENST00000412218 RREB1Q92766 1687 aa14.17□□□□□ -0.14
LINC01643-201ENST00000412218 MARCH10Q8NA82 808 aaPredicted RBP14.16□□□□□ -0.14
LINC01643-201ENST00000412218 IP6K1Q92551 441 aa14.15□□□□□ -0.14
LINC01643-201ENST00000412218 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
LINC01643-201ENST00000412218 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
LINC01643-201ENST00000412218 RTL1A6NKG5 1358 aa14.14□□□□□ -0.15
LINC01643-201ENST00000412218 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
LINC01643-201ENST00000412218 FYB1O15117 783 aa14.14□□□□□ -0.15
LINC01643-201ENST00000412218 NUP188Q5SRE5 1749 aa14.14□□□□□ -0.15
LINC01643-201ENST00000412218 LRP5O75197 1615 aa14.14□□□□□ -0.15
LINC01643-201ENST00000412218 FAM208AQ9UK61 1670 aaKnown RBP14.14□□□□□ -0.15
LINC01643-201ENST00000412218 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
LINC01643-201ENST00000412218 RGPD3A6NKT7 1758 aaPredicted RBP14.13□□□□□ -0.15
LINC01643-201ENST00000412218 RGPD4Q7Z3J3 1758 aa14.13□□□□□ -0.15
LINC01643-201ENST00000412218 NSD3Q9BZ95 1437 aa14.13□□□□□ -0.15
LINC01643-201ENST00000412218 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
LINC01643-201ENST00000412218 EXOC5O00471 708 aa14.12□□□□□ -0.15
LINC01643-201ENST00000412218 IL2RBP14784 551 aa14.12□□□□□ -0.15
LINC01643-201ENST00000412218 FBLN1P23142 703 aa14.12□□□□□ -0.15
LINC01643-201ENST00000412218 HOXC9P31274 260 aa14.12□□□□□ -0.15
LINC01643-201ENST00000412218 CARD14Q9BXL6 1004 aa14.12□□□□□ -0.15
LINC01643-201ENST00000412218 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
LINC01643-201ENST00000412218 AMPHP49418 695 aa14.11□□□□□ -0.15
LINC01643-201ENST00000412218 R3HDM1Q15032 1099 aaKnown RBP14.11□□□□□ -0.15
LINC01643-201ENST00000412218 PTF1AQ7RTS3 328 aa14.11□□□□□ -0.15
LINC01643-201ENST00000412218 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
LINC01643-201ENST00000412218 LTV1Q96GA3 475 aaPredicted RBP14.1□□□□□ -0.15
LINC01643-201ENST00000412218 PLSCR1O15162 318 aa14.09□□□□□ -0.15
LINC01643-201ENST00000412218 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
LINC01643-201ENST00000412218 EIF4G2P78344 907 aaKnown RBP eCLIP14.09□□□□□ -0.15
LINC01643-201ENST00000412218 RRS1Q15050 365 aaKnown RBP14.09□□□□□ -0.15
LINC01643-201ENST00000412218 NHSQ6T4R5 1651 aa14.09□□□□□ -0.15
LINC01643-201ENST00000412218 FLT4P35916 1363 aa14.07□□□□□ -0.16
LINC01643-201ENST00000412218 KIF24Q5T7B8 1368 aa14.07□□□□□ -0.16
LINC01643-201ENST00000412218 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
LINC01643-201ENST00000412218 NBPF14Q5TI25 921 aa14.06□□□□□ -0.16
LINC01643-201ENST00000412218 INSRP06213 1382 aa14.06□□□□□ -0.16
LINC01643-201ENST00000412218 MEGF6O75095 1541 aa14.05□□□□□ -0.16
LINC01643-201ENST00000412218 SRCAPQ6ZRS2 3230 aa14.05□□□□□ -0.16
LINC01643-201ENST00000412218 KCNQ2O43526 872 aa14.05□□□□□ -0.16
LINC01643-201ENST00000412218 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
LINC01643-201ENST00000412218 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
LINC01643-201ENST00000412218 POLR3GLQ9BT43 218 aa14.04□□□□□ -0.16
LINC01643-201ENST00000412218 ZNF316A6NFI3 1004 aaPredicted RBP14.03□□□□□ -0.16
LINC01643-201ENST00000412218 HSP90AB2PQ58FF8 381 aa14.03□□□□□ -0.16
LINC01643-201ENST00000412218 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
LINC01643-201ENST00000412218 PROM2Q8N271 834 aa14.03□□□□□ -0.16
LINC01643-201ENST00000412218 ACSBG1Q96GR2 724 aa14.03□□□□□ -0.16
LINC01643-201ENST00000412218 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
LINC01643-201ENST00000412218 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
LINC01643-201ENST00000412218 RGPD2P0DJD1 1756 aa14.03□□□□□ -0.16
LINC01643-201ENST00000412218 SHANK3Q9BYB0 1731 aa14.02□□□□□ -0.16
LINC01643-201ENST00000412218 EMILIN1Q9Y6C2 1016 aa14.02□□□□□ -0.17
LINC01643-201ENST00000412218 TXNRD1Q16881 649 aa14.01□□□□□ -0.17
LINC01643-201ENST00000412218 USHBP1Q8N6Y0 703 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms