RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 THRAP3Q9Y2W1 955 aaKnown RBP16.28■□□□□ 0.2
LINC00963-201ENST00000412141 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
LINC00963-201ENST00000412141 APBA3O96018 575 aa16.27■□□□□ 0.2
LINC00963-201ENST00000412141 RGPD1P0DJD0 1748 aa16.27■□□□□ 0.19
LINC00963-201ENST00000412141 WDR17Q8IZU2 1322 aa16.26■□□□□ 0.19
LINC00963-201ENST00000412141 EZH2Q15910 746 aaKnown RBP16.26■□□□□ 0.19
LINC00963-201ENST00000412141 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
LINC00963-201ENST00000412141 TMF1P82094 1093 aa16.25■□□□□ 0.19
LINC00963-201ENST00000412141 DDB1Q16531 1140 aa16.25■□□□□ 0.19
LINC00963-201ENST00000412141 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
LINC00963-201ENST00000412141 EDC4Q6P2E9 1401 aaKnown RBP16.25■□□□□ 0.19
LINC00963-201ENST00000412141 MON2Q7Z3U7 1717 aa16.25■□□□□ 0.19
LINC00963-201ENST00000412141 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
LINC00963-201ENST00000412141 LRP5O75197 1615 aa16.24■□□□□ 0.19
LINC00963-201ENST00000412141 FBLN1P23142 703 aa16.24■□□□□ 0.19
LINC00963-201ENST00000412141 NLRP2Q9NX02 1062 aa16.24■□□□□ 0.19
LINC00963-201ENST00000412141 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
LINC00963-201ENST00000412141 NFAT5O94916 1531 aa16.24■□□□□ 0.19
LINC00963-201ENST00000412141 COL18A1P39060 1754 aa16.23■□□□□ 0.19
LINC00963-201ENST00000412141 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
LINC00963-201ENST00000412141 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
LINC00963-201ENST00000412141 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
LINC00963-201ENST00000412141 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
LINC00963-201ENST00000412141 RGPD5Q99666 1765 aa16.22■□□□□ 0.19
LINC00963-201ENST00000412141 COG3Q96JB2 828 aa16.21■□□□□ 0.19
LINC00963-201ENST00000412141 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
LINC00963-201ENST00000412141 R3HDM1Q15032 1099 aaKnown RBP16.2■□□□□ 0.18
LINC00963-201ENST00000412141 ANKRD24Q8TF21 1146 aa16.2■□□□□ 0.18
LINC00963-201ENST00000412141 CAMKK2Q96RR4 588 aa16.2■□□□□ 0.18
LINC00963-201ENST00000412141 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
LINC00963-201ENST00000412141 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
LINC00963-201ENST00000412141 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
LINC00963-201ENST00000412141 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
LINC00963-201ENST00000412141 NINLQ9Y2I6 1382 aa16.18■□□□□ 0.18
LINC00963-201ENST00000412141 EXOC5O00471 708 aa16.18■□□□□ 0.18
LINC00963-201ENST00000412141 GGNBP2Q9H3C7 697 aa16.18■□□□□ 0.18
LINC00963-201ENST00000412141 ERBB3P21860 1342 aa16.18■□□□□ 0.18
LINC00963-201ENST00000412141 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
LINC00963-201ENST00000412141 AMPHP49418 695 aa16.17■□□□□ 0.18
LINC00963-201ENST00000412141 CDCA7Q9BWT1 371 aaPredicted RBP16.17■□□□□ 0.18
LINC00963-201ENST00000412141 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
LINC00963-201ENST00000412141 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
LINC00963-201ENST00000412141 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
LINC00963-201ENST00000412141 OVOS2A0A0G2JMS6 1433 aa16.16■□□□□ 0.18
LINC00963-201ENST00000412141 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
LINC00963-201ENST00000412141 CCDC7Q96M83 1385 aa16.15■□□□□ 0.18
LINC00963-201ENST00000412141 FYB1O15117 783 aa16.15■□□□□ 0.18
LINC00963-201ENST00000412141 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
LINC00963-201ENST00000412141 IP6K1Q92551 441 aa16.15■□□□□ 0.18
LINC00963-201ENST00000412141 MAP3K19Q56UN5 1328 aa16.15■□□□□ 0.18
LINC00963-201ENST00000412141 LRRC37A3O60309 1634 aa16.14■□□□□ 0.17
LINC00963-201ENST00000412141 LTN1O94822 1766 aa16.13■□□□□ 0.17
LINC00963-201ENST00000412141 IL2RBP14784 551 aa16.13■□□□□ 0.17
LINC00963-201ENST00000412141 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
LINC00963-201ENST00000412141 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
LINC00963-201ENST00000412141 RREB1Q92766 1687 aa16.12■□□□□ 0.17
LINC00963-201ENST00000412141 C11orf95C9JLR9 678 aaPredicted RBP16.12■□□□□ 0.17
LINC00963-201ENST00000412141 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
LINC00963-201ENST00000412141 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
LINC00963-201ENST00000412141 KCNQ2O43526 872 aa16.11■□□□□ 0.17
LINC00963-201ENST00000412141 HOXC9P31274 260 aa16.11■□□□□ 0.17
LINC00963-201ENST00000412141 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
LINC00963-201ENST00000412141 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
LINC00963-201ENST00000412141 HSPA5P11021 654 aaKnown RBP16.1■□□□□ 0.17
LINC00963-201ENST00000412141 DDX54Q8TDD1 881 aaKnown RBP16.1■□□□□ 0.17
LINC00963-201ENST00000412141 NUP188Q5SRE5 1749 aa16.1■□□□□ 0.17
LINC00963-201ENST00000412141 ABCC6O95255 1503 aa16.09■□□□□ 0.17
LINC00963-201ENST00000412141 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
LINC00963-201ENST00000412141 PEAK1Q9H792 1746 aa16.08■□□□□ 0.17
LINC00963-201ENST00000412141 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
LINC00963-201ENST00000412141 NSD3Q9BZ95 1437 aa16.08■□□□□ 0.16
LINC00963-201ENST00000412141 WNK3Q9BYP7 1800 aa16.08■□□□□ 0.16
LINC00963-201ENST00000412141 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
LINC00963-201ENST00000412141 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
LINC00963-201ENST00000412141 KAT6BQ8WYB5 2073 aa16.07■□□□□ 0.16
LINC00963-201ENST00000412141 PLSCR1O15162 318 aa16.06■□□□□ 0.16
LINC00963-201ENST00000412141 HSP90AB2PQ58FF8 381 aa16.06■□□□□ 0.16
LINC00963-201ENST00000412141 PROM2Q8N271 834 aa16.05■□□□□ 0.16
LINC00963-201ENST00000412141 SBF2Q86WG5 1849 aa16.05■□□□□ 0.16
LINC00963-201ENST00000412141 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
LINC00963-201ENST00000412141 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
LINC00963-201ENST00000412141 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
LINC00963-201ENST00000412141 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
LINC00963-201ENST00000412141 EMILIN1Q9Y6C2 1016 aa16.04■□□□□ 0.16
LINC00963-201ENST00000412141 TXNRD1Q16881 649 aa16.03■□□□□ 0.16
LINC00963-201ENST00000412141 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
LINC00963-201ENST00000412141 BCL9O00512 1426 aa16.02■□□□□ 0.15
LINC00963-201ENST00000412141 MYOM1P52179 1685 aa16.02■□□□□ 0.15
LINC00963-201ENST00000412141 CGNL1Q0VF96 1302 aa16.01■□□□□ 0.15
LINC00963-201ENST00000412141 ZCRB1Q8TBF4 217 aaKnown RBP16.01■□□□□ 0.15
LINC00963-201ENST00000412141 RTL1A6NKG5 1358 aa16■□□□□ 0.15
LINC00963-201ENST00000412141 RAPGEF4Q8WZA2 1011 aa16■□□□□ 0.15
LINC00963-201ENST00000412141 PDGFDQ9GZP0 370 aaPredicted RBP16■□□□□ 0.15
LINC00963-201ENST00000412141 PANK3Q9H999 370 aa16■□□□□ 0.15
LINC00963-201ENST00000412141 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
LINC00963-201ENST00000412141 RGPD3A6NKT7 1758 aaPredicted RBP16■□□□□ 0.15
LINC00963-201ENST00000412141 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
LINC00963-201ENST00000412141 RGPD4Q7Z3J3 1758 aa16■□□□□ 0.15
LINC00963-201ENST00000412141 KIF20BQ96Q89 1820 aa15.99■□□□□ 0.15
LINC00963-201ENST00000412141 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms