RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-207ENST00000411642 FBLN1P23142 703 aa13.78□□□□□ -0.2
TTC39A-207ENST00000411642 RXRBP28702 533 aa13.78□□□□□ -0.2
TTC39A-207ENST00000411642 VPS72Q15906 364 aa13.78□□□□□ -0.2
TTC39A-207ENST00000411642 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
TTC39A-207ENST00000411642 MAP3K19Q56UN5 1328 aa13.78□□□□□ -0.2
TTC39A-207ENST00000411642 FAM208AQ9UK61 1670 aaKnown RBP13.78□□□□□ -0.2
TTC39A-207ENST00000411642 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
TTC39A-207ENST00000411642 WNK3Q9BYP7 1800 aa13.78□□□□□ -0.2
TTC39A-207ENST00000411642 EVA1CP58658 441 aa13.77□□□□□ -0.21
TTC39A-207ENST00000411642 RBM6P78332 1123 aaKnown RBP13.77□□□□□ -0.21
TTC39A-207ENST00000411642 RRS1Q15050 365 aaKnown RBP13.77□□□□□ -0.21
TTC39A-207ENST00000411642 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
TTC39A-207ENST00000411642 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
TTC39A-207ENST00000411642 BRWD3Q6RI45 1802 aa13.76□□□□□ -0.21
TTC39A-207ENST00000411642 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-207ENST00000411642 ILDR2Q71H61 639 aa13.76□□□□□ -0.21
TTC39A-207ENST00000411642 GJD4Q96KN9 370 aaPredicted RBP13.76□□□□□ -0.21
TTC39A-207ENST00000411642 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-207ENST00000411642 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
TTC39A-207ENST00000411642 TNNT2P45379 298 aaPredicted RBP13.75□□□□□ -0.21
TTC39A-207ENST00000411642 AMPHP49418 695 aa13.75□□□□□ -0.21
TTC39A-207ENST00000411642 RGS12O14924 1447 aa13.74□□□□□ -0.21
TTC39A-207ENST00000411642 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
TTC39A-207ENST00000411642 SPATA31A5Q5VU36 1347 aa13.74□□□□□ -0.21
TTC39A-207ENST00000411642 SPATA31A7Q8IWB4 1347 aa13.74□□□□□ -0.21
TTC39A-207ENST00000411642 CC2D1BQ5T0F9 858 aaKnown RBP13.74□□□□□ -0.21
TTC39A-207ENST00000411642 LARP1Q6PKG0 1096 aaKnown RBP13.74□□□□□ -0.21
TTC39A-207ENST00000411642 MORC1Q86VD1 984 aa13.74□□□□□ -0.21
TTC39A-207ENST00000411642 IP6K1Q92551 441 aa13.74□□□□□ -0.21
TTC39A-207ENST00000411642 CRB1P82279 1406 aa13.73□□□□□ -0.21
TTC39A-207ENST00000411642 ERBB3P21860 1342 aa13.73□□□□□ -0.21
TTC39A-207ENST00000411642 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
TTC39A-207ENST00000411642 CSB-PGBD3P0DP91 1061 aa13.73□□□□□ -0.21
TTC39A-207ENST00000411642 HOXC9P31274 260 aa13.73□□□□□ -0.21
TTC39A-207ENST00000411642 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
TTC39A-207ENST00000411642 EMILIN1Q9Y6C2 1016 aa13.73□□□□□ -0.21
TTC39A-207ENST00000411642 THSD7AQ9UPZ6 1657 aa13.72□□□□□ -0.21
TTC39A-207ENST00000411642 FLT4P35916 1363 aa13.72□□□□□ -0.21
TTC39A-207ENST00000411642 KIF24Q5T7B8 1368 aa13.72□□□□□ -0.21
TTC39A-207ENST00000411642 SPATA31A1Q5TZJ5 1347 aa13.72□□□□□ -0.21
TTC39A-207ENST00000411642 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
TTC39A-207ENST00000411642 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
TTC39A-207ENST00000411642 USP35Q9P2H5 1018 aa13.72□□□□□ -0.21
TTC39A-207ENST00000411642 ZNF316A6NFI3 1004 aaPredicted RBP13.71□□□□□ -0.21
TTC39A-207ENST00000411642 PPM1GO15355 546 aaPredicted RBP13.71□□□□□ -0.21
TTC39A-207ENST00000411642 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
TTC39A-207ENST00000411642 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
TTC39A-207ENST00000411642 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
TTC39A-207ENST00000411642 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
TTC39A-207ENST00000411642 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
TTC39A-207ENST00000411642 POLKQ9UBT6 870 aa13.7□□□□□ -0.22
TTC39A-207ENST00000411642 INSRP06213 1382 aa13.7□□□□□ -0.22
TTC39A-207ENST00000411642 A0A0G2JS52 829 aa13.69□□□□□ -0.22
TTC39A-207ENST00000411642 MYT1Q01538 1121 aa13.69□□□□□ -0.22
TTC39A-207ENST00000411642 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
TTC39A-207ENST00000411642 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
TTC39A-207ENST00000411642 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
TTC39A-207ENST00000411642 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
TTC39A-207ENST00000411642 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
TTC39A-207ENST00000411642 EP400Q96L91 3159 aa13.67□□□□□ -0.22
TTC39A-207ENST00000411642 ONECUT3O60422 494 aaPredicted RBP13.67□□□□□ -0.22
TTC39A-207ENST00000411642 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
TTC39A-207ENST00000411642 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
TTC39A-207ENST00000411642 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
TTC39A-207ENST00000411642 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
TTC39A-207ENST00000411642 DISP2A7MBM2 1401 aa13.64□□□□□ -0.23
TTC39A-207ENST00000411642 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
TTC39A-207ENST00000411642 MTHFSP49914 203 aa13.63□□□□□ -0.23
TTC39A-207ENST00000411642 RGPD1P0DJD0 1748 aa13.63□□□□□ -0.23
TTC39A-207ENST00000411642 SHANK3Q9BYB0 1731 aa13.62□□□□□ -0.23
TTC39A-207ENST00000411642 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
TTC39A-207ENST00000411642 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
TTC39A-207ENST00000411642 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
TTC39A-207ENST00000411642 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
TTC39A-207ENST00000411642 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
TTC39A-207ENST00000411642 CDCA7Q9BWT1 371 aaPredicted RBP13.61□□□□□ -0.23
TTC39A-207ENST00000411642 MEGF6O75095 1541 aa13.6□□□□□ -0.23
TTC39A-207ENST00000411642 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
TTC39A-207ENST00000411642 IL2RBP14784 551 aa13.6□□□□□ -0.23
TTC39A-207ENST00000411642 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
TTC39A-207ENST00000411642 NCAPD2Q15021 1401 aa13.6□□□□□ -0.23
TTC39A-207ENST00000411642 DDB1Q16531 1140 aa13.6□□□□□ -0.23
TTC39A-207ENST00000411642 TNS2Q63HR2 1409 aa13.6□□□□□ -0.23
TTC39A-207ENST00000411642 COL3A1P02461 1466 aaPredicted RBP13.6□□□□□ -0.23
TTC39A-207ENST00000411642 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
TTC39A-207ENST00000411642 EYA1Q99502 592 aa13.59□□□□□ -0.23
TTC39A-207ENST00000411642 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
TTC39A-207ENST00000411642 OVOS2A0A0G2JMS6 1433 aa13.57□□□□□ -0.24
TTC39A-207ENST00000411642 IL13P35225 146 aa13.57□□□□□ -0.24
TTC39A-207ENST00000411642 RALBP1Q15311 655 aa13.57□□□□□ -0.24
TTC39A-207ENST00000411642 RAPGEF4Q8WZA2 1011 aa13.57□□□□□ -0.24
TTC39A-207ENST00000411642 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
TTC39A-207ENST00000411642 EXOC5O00471 708 aa13.56□□□□□ -0.24
TTC39A-207ENST00000411642 SOCS7O14512 581 aa13.56□□□□□ -0.24
TTC39A-207ENST00000411642 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
TTC39A-207ENST00000411642 FAM182BQ5T319 152 aa13.56□□□□□ -0.24
TTC39A-207ENST00000411642 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
TTC39A-207ENST00000411642 TATP17735 454 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-207ENST00000411642 TNS1Q9HBL0 1735 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms