RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TTC21BQ7Z4L5 1316 aa20.45■□□□□ 0.86
HLA-DQB2-229ENST00000411527 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
HLA-DQB2-229ENST00000411527 SOX12O15370 315 aa20.44■□□□□ 0.86
HLA-DQB2-229ENST00000411527 KCNQ2O43526 872 aa20.44■□□□□ 0.86
HLA-DQB2-229ENST00000411527 ARHGEF25Q86VW2 580 aa20.44■□□□□ 0.86
HLA-DQB2-229ENST00000411527 KCNH5Q8NCM2 988 aa20.44■□□□□ 0.86
HLA-DQB2-229ENST00000411527 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
HLA-DQB2-229ENST00000411527 PTF1AQ7RTS3 328 aa20.43■□□□□ 0.86
HLA-DQB2-229ENST00000411527 CDCA7Q9BWT1 371 aaPredicted RBP20.43■□□□□ 0.86
HLA-DQB2-229ENST00000411527 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
HLA-DQB2-229ENST00000411527 AKAP12Q02952 1782 aa20.43■□□□□ 0.86
HLA-DQB2-229ENST00000411527 WNK3Q9BYP7 1800 aa20.43■□□□□ 0.86
HLA-DQB2-229ENST00000411527 CPSF1Q10570 1443 aaKnown RBP20.43■□□□□ 0.86
HLA-DQB2-229ENST00000411527 CSB-PGBD3P0DP91 1061 aa20.42■□□□□ 0.86
HLA-DQB2-229ENST00000411527 MARCH10Q8NA82 808 aaPredicted RBP20.42■□□□□ 0.86
HLA-DQB2-229ENST00000411527 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
HLA-DQB2-229ENST00000411527 RGPD3A6NKT7 1758 aaPredicted RBP20.41■□□□□ 0.86
HLA-DQB2-229ENST00000411527 RGPD4Q7Z3J3 1758 aa20.41■□□□□ 0.86
HLA-DQB2-229ENST00000411527 NEUROD1Q13562 356 aa20.41■□□□□ 0.86
HLA-DQB2-229ENST00000411527 TTC21AQ8NDW8 1320 aa20.4■□□□□ 0.86
HLA-DQB2-229ENST00000411527 CARD10Q9BWT7 1032 aa20.39■□□□□ 0.85
HLA-DQB2-229ENST00000411527 KTN1Q86UP2 1357 aaKnown RBP20.38■□□□□ 0.85
HLA-DQB2-229ENST00000411527 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
HLA-DQB2-229ENST00000411527 EXOC5O00471 708 aa20.37■□□□□ 0.85
HLA-DQB2-229ENST00000411527 PROM2Q8N271 834 aa20.37■□□□□ 0.85
HLA-DQB2-229ENST00000411527 YY1P25490 414 aa20.36■□□□□ 0.85
HLA-DQB2-229ENST00000411527 BCL9O00512 1426 aa20.36■□□□□ 0.85
HLA-DQB2-229ENST00000411527 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
HLA-DQB2-229ENST00000411527 NFAT5O94916 1531 aa20.34■□□□□ 0.85
HLA-DQB2-229ENST00000411527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
HLA-DQB2-229ENST00000411527 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
HLA-DQB2-229ENST00000411527 NINLQ9Y2I6 1382 aa20.34■□□□□ 0.85
HLA-DQB2-229ENST00000411527 PDGFDQ9GZP0 370 aaPredicted RBP20.33■□□□□ 0.85
HLA-DQB2-229ENST00000411527 CASZ1Q86V15 1759 aa20.33■□□□□ 0.84
HLA-DQB2-229ENST00000411527 TXNRD1Q16881 649 aa20.32■□□□□ 0.84
HLA-DQB2-229ENST00000411527 MON2Q7Z3U7 1717 aa20.32■□□□□ 0.84
HLA-DQB2-229ENST00000411527 ZBTB7AO95365 584 aa20.3■□□□□ 0.84
HLA-DQB2-229ENST00000411527 STK32BQ9NY57 414 aa20.3■□□□□ 0.84
HLA-DQB2-229ENST00000411527 ABCC6O95255 1503 aa20.29■□□□□ 0.84
HLA-DQB2-229ENST00000411527 NME9Q86XW9 330 aa20.29■□□□□ 0.84
HLA-DQB2-229ENST00000411527 NLRP2Q9NX02 1062 aa20.29■□□□□ 0.84
HLA-DQB2-229ENST00000411527 USP31Q70CQ4 1352 aa20.29■□□□□ 0.84
HLA-DQB2-229ENST00000411527 SLC15A2Q16348 729 aa20.28■□□□□ 0.84
HLA-DQB2-229ENST00000411527 TMC1Q8TDI8 760 aa20.28■□□□□ 0.84
HLA-DQB2-229ENST00000411527 ATF5Q9Y2D1 282 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB2-229ENST00000411527 TNS2Q63HR2 1409 aa20.27■□□□□ 0.84
HLA-DQB2-229ENST00000411527 LTN1O94822 1766 aa20.27■□□□□ 0.84
HLA-DQB2-229ENST00000411527 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
HLA-DQB2-229ENST00000411527 CARD11Q9BXL7 1154 aa20.27■□□□□ 0.84
HLA-DQB2-229ENST00000411527 SBNO2Q9Y2G9 1366 aa20.26■□□□□ 0.83
HLA-DQB2-229ENST00000411527 ERBB3P21860 1342 aa20.26■□□□□ 0.83
HLA-DQB2-229ENST00000411527 CD163L1Q9NR16 1453 aa20.25■□□□□ 0.83
HLA-DQB2-229ENST00000411527 PTGER2P43116 358 aa20.25■□□□□ 0.83
HLA-DQB2-229ENST00000411527 HDGFL2Q7Z4V5 671 aaPredicted RBP20.25■□□□□ 0.83
HLA-DQB2-229ENST00000411527 NHSQ6T4R5 1651 aa20.25■□□□□ 0.83
HLA-DQB2-229ENST00000411527 USP54Q70EL1 1684 aa20.25■□□□□ 0.83
HLA-DQB2-229ENST00000411527 KAT6BQ8WYB5 2073 aa20.24■□□□□ 0.83
HLA-DQB2-229ENST00000411527 MYOM1P52179 1685 aa20.24■□□□□ 0.83
HLA-DQB2-229ENST00000411527 IL2RBP14784 551 aa20.24■□□□□ 0.83
HLA-DQB2-229ENST00000411527 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
HLA-DQB2-229ENST00000411527 ANKRD24Q8TF21 1146 aa20.23■□□□□ 0.83
HLA-DQB2-229ENST00000411527 MTFR1LQ9H019 292 aa20.21■□□□□ 0.83
HLA-DQB2-229ENST00000411527 TERF2IPQ9NYB0 399 aa20.21■□□□□ 0.83
HLA-DQB2-229ENST00000411527 EDC4Q6P2E9 1401 aaKnown RBP20.19■□□□□ 0.82
HLA-DQB2-229ENST00000411527 BTAF1O14981 1849 aa20.19■□□□□ 0.82
HLA-DQB2-229ENST00000411527 SYT17Q9BSW7 474 aa20.19■□□□□ 0.82
HLA-DQB2-229ENST00000411527 FHDC1Q9C0D6 1143 aaPredicted RBP20.19■□□□□ 0.82
HLA-DQB2-229ENST00000411527 A0A1W2PP64 1363 aa20.18■□□□□ 0.82
HLA-DQB2-229ENST00000411527 IP6K1Q92551 441 aa20.16■□□□□ 0.82
HLA-DQB2-229ENST00000411527 SGIP1Q9BQI5 828 aa20.16■□□□□ 0.82
HLA-DQB2-229ENST00000411527 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB2-229ENST00000411527 LTV1Q96GA3 475 aaPredicted RBP20.15■□□□□ 0.82
HLA-DQB2-229ENST00000411527 PUS7Q96PZ0 661 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB2-229ENST00000411527 PAPPAQ13219 1627 aa20.14■□□□□ 0.81
HLA-DQB2-229ENST00000411527 TONSLQ96HA7 1378 aa20.14■□□□□ 0.81
HLA-DQB2-229ENST00000411527 LRRC4BQ9NT99 713 aa20.14■□□□□ 0.81
HLA-DQB2-229ENST00000411527 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
HLA-DQB2-229ENST00000411527 ARXQ96QS3 562 aa20.13■□□□□ 0.81
HLA-DQB2-229ENST00000411527 FAM208AQ9UK61 1670 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB2-229ENST00000411527 COG3Q96JB2 828 aa20.1■□□□□ 0.81
HLA-DQB2-229ENST00000411527 FBLN1P23142 703 aa20.09■□□□□ 0.81
HLA-DQB2-229ENST00000411527 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 AMPHP49418 695 aa20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 SLC27A3Q5K4L6 730 aa20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 ZNF784Q8NCA9 323 aaPredicted RBP20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 AKT1S1Q96B36 256 aa20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 SYTL4Q96C24 671 aaPredicted RBP20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 TESK2Q96S53 571 aa20.08■□□□□ 0.81
HLA-DQB2-229ENST00000411527 CHD4Q14839 1912 aa20.08■□□□□ 0.8
HLA-DQB2-229ENST00000411527 HOXC9P31274 260 aa20.07■□□□□ 0.8
HLA-DQB2-229ENST00000411527 PRIM1P49642 420 aaKnown RBP20.07■□□□□ 0.8
HLA-DQB2-229ENST00000411527 RGPD2P0DJD1 1756 aa20.07■□□□□ 0.8
HLA-DQB2-229ENST00000411527 KCNQ4P56696 695 aa20.06■□□□□ 0.8
HLA-DQB2-229ENST00000411527 ZCRB1Q8TBF4 217 aaKnown RBP20.05■□□□□ 0.8
HLA-DQB2-229ENST00000411527 SLC16A10Q8TF71 515 aa20.05■□□□□ 0.8
HLA-DQB2-229ENST00000411527 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
HLA-DQB2-229ENST00000411527 SLC24A1O60721 1099 aa20.04■□□□□ 0.8
HLA-DQB2-229ENST00000411527 TFCP2L1Q9NZI6 479 aa20.04■□□□□ 0.8
HLA-DQB2-229ENST00000411527 ANKRD36BQ8N2N9 1353 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms