RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 KCTD15Q96SI1 283 aaPredicted RBP7.73□□□□□ -1.17
RNU4-55P-201ENST00000410731 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 FBXO45P0C2W1 286 aa7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 BMP1P13497 986 aa7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 TRIM46Q7Z4K8 759 aa7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 KIFC2Q96AC6 838 aa7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 ITPKCQ96DU7 683 aa7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 TRIM47Q96LD4 638 aa7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
RNU4-55P-201ENST00000410731 C11orf95C9JLR9 678 aaPredicted RBP7.71□□□□□ -1.18
RNU4-55P-201ENST00000410731 EMILIN1Q9Y6C2 1016 aa7.71□□□□□ -1.18
RNU4-55P-201ENST00000410731 DHX9Q08211 1270 aaKnown RBP7.7□□□□□ -1.18
RNU4-55P-201ENST00000410731 NR1H3Q13133 447 aa7.7□□□□□ -1.18
RNU4-55P-201ENST00000410731 INTS6LQ5JSJ4 861 aaKnown RBP7.7□□□□□ -1.18
RNU4-55P-201ENST00000410731 DZIP3Q86Y13 1208 aaKnown RBP7.7□□□□□ -1.18
RNU4-55P-201ENST00000410731 PPP1R26Q5T8A7 1209 aaPredicted RBP7.69□□□□□ -1.18
RNU4-55P-201ENST00000410731 MRPL14Q6P1L8 145 aaKnown RBP7.69□□□□□ -1.18
RNU4-55P-201ENST00000410731 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
RNU4-55P-201ENST00000410731 PGPEP1Q9NXJ5 209 aa7.69□□□□□ -1.18
RNU4-55P-201ENST00000410731 ESPNB1AK53 854 aa7.68□□□□□ -1.18
RNU4-55P-201ENST00000410731 MCM6Q14566 821 aa7.68□□□□□ -1.18
RNU4-55P-201ENST00000410731 PRM3Q9NNZ6 103 aa7.68□□□□□ -1.18
RNU4-55P-201ENST00000410731 TBC1D2BQ9UPU7 963 aa7.68□□□□□ -1.18
RNU4-55P-201ENST00000410731 SNRPBP14678 240 aaKnown RBP7.67□□□□□ -1.18
RNU4-55P-201ENST00000410731 SCARF1Q14162 830 aa7.67□□□□□ -1.18
RNU4-55P-201ENST00000410731 TMEM132AQ24JP5 1023 aa7.67□□□□□ -1.18
RNU4-55P-201ENST00000410731 SEPT12Q8IYM1 358 aa7.67□□□□□ -1.18
RNU4-55P-201ENST00000410731 ZNF592Q92610 1267 aa7.67□□□□□ -1.18
RNU4-55P-201ENST00000410731 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
RNU4-55P-201ENST00000410731 ZFP42Q96MM3 310 aa7.66□□□□□ -1.18
RNU4-55P-201ENST00000410731 ZNF330Q9Y3S2 320 aaPredicted RBP7.66□□□□□ -1.18
RNU4-55P-201ENST00000410731 MCCD1P59942 119 aaPredicted RBP7.65□□□□□ -1.18
RNU4-55P-201ENST00000410731 LINC00528Q8N1L1 170 aa7.65□□□□□ -1.18
RNU4-55P-201ENST00000410731 ZNF775Q96BV0 537 aaPredicted RBP7.65□□□□□ -1.18
RNU4-55P-201ENST00000410731 PURBQ96QR8 312 aaKnown RBP7.65□□□□□ -1.18
RNU4-55P-201ENST00000410731 UPP2O95045 317 aa7.64□□□□□ -1.19
RNU4-55P-201ENST00000410731 Q6ZVU0 165 aa7.64□□□□□ -1.19
RNU4-55P-201ENST00000410731 ERVH48-1M5A8F1 160 aa7.63□□□□□ -1.19
RNU4-55P-201ENST00000410731 RAB15P59190 212 aa7.63□□□□□ -1.19
RNU4-55P-201ENST00000410731 IRF5Q13568 498 aa7.63□□□□□ -1.19
RNU4-55P-201ENST00000410731 CCDC125Q86Z20 511 aa7.63□□□□□ -1.19
RNU4-55P-201ENST00000410731 TSEN34Q9BSV6 310 aaKnown RBP7.63□□□□□ -1.19
RNU4-55P-201ENST00000410731 GIGYF1O75420 1035 aaPredicted RBP7.62□□□□□ -1.19
RNU4-55P-201ENST00000410731 CBLBQ13191 982 aa7.62□□□□□ -1.19
RNU4-55P-201ENST00000410731 C6orf118Q5T5N4 469 aa7.62□□□□□ -1.19
RNU4-55P-201ENST00000410731 ZNF784Q8NCA9 323 aaPredicted RBP7.62□□□□□ -1.19
RNU4-55P-201ENST00000410731 GDPD2Q9HCC8 539 aa7.62□□□□□ -1.19
RNU4-55P-201ENST00000410731 TMPRSS4Q9NRS4 437 aa7.62□□□□□ -1.19
RNU4-55P-201ENST00000410731 BMP2P12643 396 aa7.61□□□□□ -1.19
RNU4-55P-201ENST00000410731 RNF20Q5VTR2 975 aa7.61□□□□□ -1.19
RNU4-55P-201ENST00000410731 TRIM52Q96A61 297 aa7.61□□□□□ -1.19
RNU4-55P-201ENST00000410731 LILRA1O75019 489 aa7.6□□□□□ -1.19
RNU4-55P-201ENST00000410731 ABL2P42684 1182 aa7.59□□□□□ -1.19
RNU4-55P-201ENST00000410731 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNU4-55P-201ENST00000410731 FLIIQ13045 1269 aa7.59□□□□□ -1.19
RNU4-55P-201ENST00000410731 COG6Q9Y2V7 657 aa7.59□□□□□ -1.19
RNU4-55P-201ENST00000410731 SPINT1O43278 529 aa7.58□□□□□ -1.2
RNU4-55P-201ENST00000410731 ADH1AP07327 375 aa7.58□□□□□ -1.2
RNU4-55P-201ENST00000410731 WASHC4Q2M389 1173 aa7.58□□□□□ -1.2
RNU4-55P-201ENST00000410731 SOS2Q07890 1332 aaPredicted RBP7.57□□□□□ -1.2
RNU4-55P-201ENST00000410731 VAC14Q08AM6 782 aa7.57□□□□□ -1.2
RNU4-55P-201ENST00000410731 AGBL1Q96MI9 1066 aa7.57□□□□□ -1.2
RNU4-55P-201ENST00000410731 CYLDQ9NQC7 956 aa7.57□□□□□ -1.2
RNU4-55P-201ENST00000410731 TERTO14746 1132 aaKnown RBP7.56□□□□□ -1.2
RNU4-55P-201ENST00000410731 MAN1A2O60476 641 aa7.56□□□□□ -1.2
RNU4-55P-201ENST00000410731 ADD1P35611 737 aaKnown RBP7.56□□□□□ -1.2
RNU4-55P-201ENST00000410731 ERVK-9P63128 1117 aa7.56□□□□□ -1.2
RNU4-55P-201ENST00000410731 TREML4Q6UXN2 200 aa7.56□□□□□ -1.2
RNU4-55P-201ENST00000410731 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
RNU4-55P-201ENST00000410731 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 RELBQ01201 579 aa7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 NFX1Q12986 1120 aaKnown RBP7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 CC2D2BQ6DHV5 1058 aa7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 DNMT3LQ9UJW3 386 aa7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 PCDHB11Q9Y5F2 797 aa7.55□□□□□ -1.2
RNU4-55P-201ENST00000410731 TTLL8A6PVC2 850 aa7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 WFS1O76024 890 aa7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 SOX11P35716 441 aa7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 PTGIRP43119 386 aa7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 POM121Q96HA1 1249 aa7.54□□□□□ -1.2
RNU4-55P-201ENST00000410731 RAD21O60216 631 aa7.53□□□□□ -1.2
RNU4-55P-201ENST00000410731 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
RNU4-55P-201ENST00000410731 ATP5J2-PTCD1G3V325 749 aa7.52□□□□□ -1.21
RNU4-55P-201ENST00000410731 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.52□□□□□ -1.21
RNU4-55P-201ENST00000410731 CCDC85AQ96PX6 553 aaPredicted RBP7.52□□□□□ -1.21
RNU4-55P-201ENST00000410731 INSM2Q96T92 566 aaPredicted RBP7.52□□□□□ -1.21
RNU4-55P-201ENST00000410731 ZNF395Q9H8N7 513 aaPredicted RBP7.52□□□□□ -1.21
RNU4-55P-201ENST00000410731 H3BM21 787 aa7.51□□□□□ -1.21
RNU4-55P-201ENST00000410731 CTSOP43234 321 aaPredicted RBP7.51□□□□□ -1.21
RNU4-55P-201ENST00000410731 SCTRP47872 440 aa7.51□□□□□ -1.21
RNU4-55P-201ENST00000410731 SLFNL1Q499Z3 407 aa7.51□□□□□ -1.21
RNU4-55P-201ENST00000410731 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
RNU4-55P-201ENST00000410731 PHTF2Q8N3S3 785 aa7.51□□□□□ -1.21
RNU4-55P-201ENST00000410731 POLMQ9NP87 494 aaPredicted RBP7.51□□□□□ -1.21
RNU4-55P-201ENST00000410731 TRAK2O60296 914 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms