RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 C16orf71Q8IYS4 520 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 EZRP15311 586 aaKnown RBP13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 PPP4R3AQ6IN85 833 aa13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 MTHFSP49914 203 aa13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 GNAI1P63096 354 aa13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 FAM177A1Q8N128 213 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 TRIM5Q9C035 493 aa13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 SPC24Q8NBT2 197 aa13.3□□□□□ -0.28
PRPF40A-202ENST00000410080 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 XPCQ01831 940 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 SERPINC1P01008 464 aa13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 COMMD10Q9Y6G5 202 aa13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 MYOM3Q5VTT5 1437 aa13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 FAM193AP78312 1265 aa13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 LRP2BPQ9P2M1 347 aa13.29□□□□□ -0.28
PRPF40A-202ENST00000410080 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 CRACR2BQ8N4Y2 399 aaPredicted RBP13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 TNIP1Q15025 636 aa13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 PRAM1Q96QH2 718 aa13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 GRIPAP1Q4V328 841 aa13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 LIG1P18858 919 aa13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
PRPF40A-202ENST00000410080 RAI14Q9P0K7 980 aa13.27□□□□□ -0.28
PRPF40A-202ENST00000410080 VTI1AQ96AJ9 217 aa13.27□□□□□ -0.28
PRPF40A-202ENST00000410080 AFAP1Q8N556 730 aa13.27□□□□□ -0.28
PRPF40A-202ENST00000410080 CCDC112Q8NEF3 446 aa13.27□□□□□ -0.28
PRPF40A-202ENST00000410080 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
PRPF40A-202ENST00000410080 ZNF396Q96N95 335 aaPredicted RBP13.27□□□□□ -0.29
PRPF40A-202ENST00000410080 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
PRPF40A-202ENST00000410080 RNF214Q8ND24 703 aa13.26□□□□□ -0.29
PRPF40A-202ENST00000410080 STK38Q15208 465 aa13.26□□□□□ -0.29
PRPF40A-202ENST00000410080 TRMT1LQ7Z2T5 733 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-202ENST00000410080 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
PRPF40A-202ENST00000410080 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-202ENST00000410080 HIP1O00291 1037 aa13.26□□□□□ -0.29
PRPF40A-202ENST00000410080 PPFIBP1Q86W92 1011 aa13.26□□□□□ -0.29
PRPF40A-202ENST00000410080 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 ABCF2Q9UG63 623 aa13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 LRRFIP2Q9Y608 721 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 NUCB2P80303 420 aa13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 MRPS9P82933 396 aaKnown RBP13.25□□□□□ -0.29
PRPF40A-202ENST00000410080 TAF3Q5VWG9 929 aa13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 UBAC1Q9BSL1 405 aa13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 POLR3DP05423 398 aaPredicted RBP13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 IGHMBP2P38935 993 aaKnown RBP13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 ME1P48163 572 aa13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
PRPF40A-202ENST00000410080 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 UBA5Q9GZZ9 404 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 CWC15Q9P013 229 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 GSE1Q14687 1217 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 PUS7Q96PZ0 661 aaKnown RBP13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 PRDM11Q9NQV5 511 aa13.23□□□□□ -0.29
PRPF40A-202ENST00000410080 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 C22orf23Q9BZE7 217 aa13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 SLC4A8Q2Y0W8 1093 aa13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 NF2P35240 595 aa13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 GOLGA6L10A0A0M3HER8 536 aa13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 KIAA1328Q86T90 577 aa13.22□□□□□ -0.29
PRPF40A-202ENST00000410080 FIBPO43427 364 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 GNAI2P04899 355 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 FERMT2Q96AC1 680 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 NOL7Q9UMY1 257 aaKnown RBP13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.29
PRPF40A-202ENST00000410080 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.3
PRPF40A-202ENST00000410080 DHX8Q14562 1220 aaKnown RBP13.21□□□□□ -0.3
PRPF40A-202ENST00000410080 CCDC96Q2M329 555 aa13.21□□□□□ -0.3
PRPF40A-202ENST00000410080 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.3
PRPF40A-202ENST00000410080 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 CCDC91Q7Z6B0 441 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 ZMYND15Q9H091 742 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
PRPF40A-202ENST00000410080 CAVIN1Q6NZI2 390 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms