RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 LMO7Q8WWI1 1683 aa20.54■□□□□ 0.88
LSM5-207ENST00000410044 ADAMTS2O95450 1211 aa20.54■□□□□ 0.88
LSM5-207ENST00000410044 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
LSM5-207ENST00000410044 CDK12Q9NYV4 1490 aaPredicted RBP20.53■□□□□ 0.88
LSM5-207ENST00000410044 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
LSM5-207ENST00000410044 CHRNA2Q15822 529 aa20.52■□□□□ 0.88
LSM5-207ENST00000410044 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
LSM5-207ENST00000410044 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
LSM5-207ENST00000410044 FNBP4Q8N3X1 1017 aaPredicted RBP20.51■□□□□ 0.87
LSM5-207ENST00000410044 CAMTA1Q9Y6Y1 1673 aa20.51■□□□□ 0.87
LSM5-207ENST00000410044 SLIT2O94813 1529 aa20.5■□□□□ 0.87
LSM5-207ENST00000410044 PPM1GO15355 546 aaPredicted RBP20.5■□□□□ 0.87
LSM5-207ENST00000410044 CFAP53Q96M91 514 aa20.49■□□□□ 0.87
LSM5-207ENST00000410044 NWD2Q9ULI1 1742 aa20.49■□□□□ 0.87
LSM5-207ENST00000410044 ZBTB7CA1YPR0 619 aa20.48■□□□□ 0.87
LSM5-207ENST00000410044 MIER1Q8N108 512 aa20.48■□□□□ 0.87
LSM5-207ENST00000410044 NGLY1Q96IV0 654 aa20.48■□□□□ 0.87
LSM5-207ENST00000410044 CCER2I3L3R5 266 aa20.47■□□□□ 0.87
LSM5-207ENST00000410044 BTG4Q9NY30 223 aa20.47■□□□□ 0.87
LSM5-207ENST00000410044 COL3A1P02461 1466 aaPredicted RBP20.47■□□□□ 0.87
LSM5-207ENST00000410044 PLCH1Q4KWH8 1693 aa20.47■□□□□ 0.87
LSM5-207ENST00000410044 IL13P35225 146 aa20.46■□□□□ 0.87
LSM5-207ENST00000410044 MEX3CQ5U5Q3 659 aaKnown RBP20.46■□□□□ 0.87
LSM5-207ENST00000410044 C8orf37Q96NL8 207 aa20.46■□□□□ 0.87
LSM5-207ENST00000410044 COL5A2P05997 1499 aaPredicted RBP20.45■□□□□ 0.86
LSM5-207ENST00000410044 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
LSM5-207ENST00000410044 EIF4A2Q14240 407 aaKnown RBP20.45■□□□□ 0.86
LSM5-207ENST00000410044 ANKRD24Q8TF21 1146 aa20.45■□□□□ 0.86
LSM5-207ENST00000410044 ERBB3P21860 1342 aa20.45■□□□□ 0.86
LSM5-207ENST00000410044 BCL9LQ86UU0 1499 aa20.44■□□□□ 0.86
LSM5-207ENST00000410044 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
LSM5-207ENST00000410044 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
LSM5-207ENST00000410044 UNC5CLQ8IV45 518 aa20.43■□□□□ 0.86
LSM5-207ENST00000410044 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
LSM5-207ENST00000410044 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.42■□□□□ 0.86
LSM5-207ENST00000410044 EVA1CP58658 441 aa20.42■□□□□ 0.86
LSM5-207ENST00000410044 USP21Q9UK80 565 aa20.41■□□□□ 0.86
LSM5-207ENST00000410044 AFF2P51816 1311 aa20.41■□□□□ 0.86
LSM5-207ENST00000410044 FAM208AQ9UK61 1670 aaKnown RBP20.41■□□□□ 0.86
LSM5-207ENST00000410044 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
LSM5-207ENST00000410044 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.86
LSM5-207ENST00000410044 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
LSM5-207ENST00000410044 EYA1Q99502 592 aa20.39■□□□□ 0.85
LSM5-207ENST00000410044 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 VPS72Q15906 364 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 LARP1Q6PKG0 1096 aaKnown RBP20.38■□□□□ 0.85
LSM5-207ENST00000410044 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 CARD10Q9BWT7 1032 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 RGPD2P0DJD1 1756 aa20.38■□□□□ 0.85
LSM5-207ENST00000410044 CRB1P82279 1406 aa20.37■□□□□ 0.85
LSM5-207ENST00000410044 IGSF1Q8N6C5 1336 aa20.37■□□□□ 0.85
LSM5-207ENST00000410044 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
LSM5-207ENST00000410044 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
LSM5-207ENST00000410044 SPATA31A5Q5VU36 1347 aa20.35■□□□□ 0.85
LSM5-207ENST00000410044 SPATA31A7Q8IWB4 1347 aa20.35■□□□□ 0.85
LSM5-207ENST00000410044 ZNF772Q68DY9 489 aaPredicted RBP20.35■□□□□ 0.85
LSM5-207ENST00000410044 TOM1L2Q6ZVM7 507 aa20.35■□□□□ 0.85
LSM5-207ENST00000410044 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
LSM5-207ENST00000410044 NLRP2Q9NX02 1062 aa20.34■□□□□ 0.85
LSM5-207ENST00000410044 TRPC5Q9UL62 973 aaPredicted RBP20.34■□□□□ 0.85
LSM5-207ENST00000410044 THRAP3Q9Y2W1 955 aaKnown RBP20.34■□□□□ 0.85
LSM5-207ENST00000410044 ATRNO75882 1429 aa20.34■□□□□ 0.85
LSM5-207ENST00000410044 KDRP35968 1356 aa20.34■□□□□ 0.85
LSM5-207ENST00000410044 U2SURPO15042 1029 aaKnown RBP20.32■□□□□ 0.84
LSM5-207ENST00000410044 FCHSD2O94868 740 aa20.32■□□□□ 0.84
LSM5-207ENST00000410044 QTRT2Q9H974 415 aaKnown RBP20.32■□□□□ 0.84
LSM5-207ENST00000410044 RGS17Q9UGC6 210 aaPredicted RBP20.32■□□□□ 0.84
LSM5-207ENST00000410044 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
LSM5-207ENST00000410044 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
LSM5-207ENST00000410044 GJD4Q96KN9 370 aaPredicted RBP20.31■□□□□ 0.84
LSM5-207ENST00000410044 WDR43Q15061 677 aaKnown RBP eCLIP20.3■□□□□ 0.84
LSM5-207ENST00000410044 SULT6B1Q6IMI4 303 aa20.3■□□□□ 0.84
LSM5-207ENST00000410044 BARGINQ6ZT62 677 aa20.3■□□□□ 0.84
LSM5-207ENST00000410044 TCP11L2Q8N4U5 519 aa20.3■□□□□ 0.84
LSM5-207ENST00000410044 ADAMTS8Q9UP79 889 aa20.3■□□□□ 0.84
LSM5-207ENST00000410044 PLEKHG2Q9H7P9 1386 aa20.29■□□□□ 0.84
LSM5-207ENST00000410044 ONECUT3O60422 494 aaPredicted RBP20.28■□□□□ 0.84
LSM5-207ENST00000410044 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
LSM5-207ENST00000410044 RSPH6AQ9H0K4 717 aa20.28■□□□□ 0.84
LSM5-207ENST00000410044 PNNQ9H307 717 aaKnown RBP20.28■□□□□ 0.84
LSM5-207ENST00000410044 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
LSM5-207ENST00000410044 CDCA7Q9BWT1 371 aaPredicted RBP20.27■□□□□ 0.84
LSM5-207ENST00000410044 HMOX1P09601 288 aa20.26■□□□□ 0.83
LSM5-207ENST00000410044 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
LSM5-207ENST00000410044 DISP2A7MBM2 1401 aa20.26■□□□□ 0.83
LSM5-207ENST00000410044 GLI3P10071 1580 aa20.25■□□□□ 0.83
LSM5-207ENST00000410044 IL2RBP14784 551 aa20.25■□□□□ 0.83
LSM5-207ENST00000410044 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
LSM5-207ENST00000410044 RBM6P78332 1123 aaKnown RBP20.24■□□□□ 0.83
LSM5-207ENST00000410044 RAPGEF4Q8WZA2 1011 aa20.24■□□□□ 0.83
LSM5-207ENST00000410044 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
LSM5-207ENST00000410044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.24■□□□□ 0.834e-7■□□□□ 10.5
LSM5-207ENST00000410044 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
LSM5-207ENST00000410044 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
LSM5-207ENST00000410044 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
LSM5-207ENST00000410044 PRKAR2BP31323 418 aa20.22■□□□□ 0.83
LSM5-207ENST00000410044 POTEAQ6S8J7 498 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms