RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 WNK3Q9BYP7 1800 aa17.55■□□□□ 0.4
LIMS2-203ENST00000409254 SLIT2O94813 1529 aa17.55■□□□□ 0.4
LIMS2-203ENST00000409254 PRDM11Q9NQV5 511 aa17.54■□□□□ 0.4
LIMS2-203ENST00000409254 RGPD2P0DJD1 1756 aa17.53■□□□□ 0.4
LIMS2-203ENST00000409254 COL5A2P05997 1499 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-203ENST00000409254 MTHFSP49914 203 aa17.53■□□□□ 0.4
LIMS2-203ENST00000409254 CABLES1Q8TDN4 633 aa17.53■□□□□ 0.4
LIMS2-203ENST00000409254 NCAPD2Q15021 1401 aa17.53■□□□□ 0.4
LIMS2-203ENST00000409254 HOXC9P31274 260 aa17.52■□□□□ 0.4
LIMS2-203ENST00000409254 AMPHP49418 695 aa17.52■□□□□ 0.4
LIMS2-203ENST00000409254 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
LIMS2-203ENST00000409254 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
LIMS2-203ENST00000409254 TNNT2P45379 298 aaPredicted RBP17.51■□□□□ 0.39
LIMS2-203ENST00000409254 ERBB3P21860 1342 aa17.5■□□□□ 0.39
LIMS2-203ENST00000409254 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
LIMS2-203ENST00000409254 ZC3H6P61129 1189 aaKnown RBP17.49■□□□□ 0.39
LIMS2-203ENST00000409254 SOX12O15370 315 aa17.48■□□□□ 0.39
LIMS2-203ENST00000409254 FNBP4Q8N3X1 1017 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-203ENST00000409254 KDRP35968 1356 aa17.46■□□□□ 0.39
LIMS2-203ENST00000409254 FAM83GA6ND36 823 aa17.46■□□□□ 0.39
LIMS2-203ENST00000409254 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
LIMS2-203ENST00000409254 NUDCQ9Y266 331 aa17.46■□□□□ 0.39
LIMS2-203ENST00000409254 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.38
LIMS2-203ENST00000409254 CRB1P82279 1406 aa17.45■□□□□ 0.38
LIMS2-203ENST00000409254 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
LIMS2-203ENST00000409254 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
LIMS2-203ENST00000409254 FBLN1P23142 703 aa17.44■□□□□ 0.38
LIMS2-203ENST00000409254 CNGB1Q14028 1251 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-203ENST00000409254 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
LIMS2-203ENST00000409254 MIER1Q8N108 512 aa17.44■□□□□ 0.38
LIMS2-203ENST00000409254 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
LIMS2-203ENST00000409254 NUTM2BA6NNL0 878 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-203ENST00000409254 NUTM2EB1AL46 878 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-203ENST00000409254 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-203ENST00000409254 IL13P35225 146 aa17.43■□□□□ 0.38
LIMS2-203ENST00000409254 EIF4A2Q14240 407 aaKnown RBP17.43■□□□□ 0.38
LIMS2-203ENST00000409254 NUTM2AQ8IVF1 878 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-203ENST00000409254 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
LIMS2-203ENST00000409254 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
LIMS2-203ENST00000409254 ADAMTS2O95450 1211 aa17.42■□□□□ 0.38
LIMS2-203ENST00000409254 CHRNA2Q15822 529 aa17.42■□□□□ 0.38
LIMS2-203ENST00000409254 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
LIMS2-203ENST00000409254 MEX3CQ5U5Q3 659 aaKnown RBP17.41■□□□□ 0.38
LIMS2-203ENST00000409254 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
LIMS2-203ENST00000409254 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
LIMS2-203ENST00000409254 UNC5CLQ8IV45 518 aa17.4■□□□□ 0.38
LIMS2-203ENST00000409254 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
LIMS2-203ENST00000409254 ATRNO75882 1429 aa17.39■□□□□ 0.38
LIMS2-203ENST00000409254 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
LIMS2-203ENST00000409254 NGLY1Q96IV0 654 aa17.39■□□□□ 0.37
LIMS2-203ENST00000409254 C8orf37Q96NL8 207 aa17.39■□□□□ 0.37
LIMS2-203ENST00000409254 CARD10Q9BWT7 1032 aa17.39■□□□□ 0.37
LIMS2-203ENST00000409254 THRAP3Q9Y2W1 955 aaKnown RBP17.39■□□□□ 0.37
LIMS2-203ENST00000409254 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
LIMS2-203ENST00000409254 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
LIMS2-203ENST00000409254 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
LIMS2-203ENST00000409254 THSD7AQ9UPZ6 1657 aa17.38■□□□□ 0.37
LIMS2-203ENST00000409254 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
LIMS2-203ENST00000409254 FCHSD2O94868 740 aa17.37■□□□□ 0.37
LIMS2-203ENST00000409254 VPS72Q15906 364 aa17.37■□□□□ 0.37
LIMS2-203ENST00000409254 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
LIMS2-203ENST00000409254 EVA1CP58658 441 aa17.36■□□□□ 0.37
LIMS2-203ENST00000409254 EYA1Q99502 592 aa17.36■□□□□ 0.37
LIMS2-203ENST00000409254 AFF2P51816 1311 aa17.36■□□□□ 0.37
LIMS2-203ENST00000409254 DISP2A7MBM2 1401 aa17.36■□□□□ 0.37
LIMS2-203ENST00000409254 GLI3P10071 1580 aa17.36■□□□□ 0.37
LIMS2-203ENST00000409254 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
LIMS2-203ENST00000409254 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
LIMS2-203ENST00000409254 SPATA31A5Q5VU36 1347 aa17.35■□□□□ 0.37
LIMS2-203ENST00000409254 SPATA31A7Q8IWB4 1347 aa17.35■□□□□ 0.37
LIMS2-203ENST00000409254 OVOS2A0A0G2JMS6 1433 aa17.34■□□□□ 0.37
LIMS2-203ENST00000409254 LRRC37A3O60309 1634 aa17.34■□□□□ 0.37
LIMS2-203ENST00000409254 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
LIMS2-203ENST00000409254 SPATA31A1Q5TZJ5 1347 aa17.34■□□□□ 0.37
LIMS2-203ENST00000409254 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
LIMS2-203ENST00000409254 USP21Q9UK80 565 aa17.34■□□□□ 0.37
LIMS2-203ENST00000409254 TRPC5Q9UL62 973 aaPredicted RBP17.34■□□□□ 0.37
LIMS2-203ENST00000409254 CCDC184Q52MB2 194 aa17.33■□□□□ 0.36
LIMS2-203ENST00000409254 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
LIMS2-203ENST00000409254 TOM1L2Q6ZVM7 507 aa17.33■□□□□ 0.36
LIMS2-203ENST00000409254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
LIMS2-203ENST00000409254 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
LIMS2-203ENST00000409254 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-203ENST00000409254 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
LIMS2-203ENST00000409254 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
LIMS2-203ENST00000409254 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
LIMS2-203ENST00000409254 LARP1Q6PKG0 1096 aaKnown RBP17.32■□□□□ 0.36
LIMS2-203ENST00000409254 NGEFQ8N5V2 710 aa17.32■□□□□ 0.36
LIMS2-203ENST00000409254 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
LIMS2-203ENST00000409254 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
LIMS2-203ENST00000409254 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
LIMS2-203ENST00000409254 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
LIMS2-203ENST00000409254 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
LIMS2-203ENST00000409254 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
LIMS2-203ENST00000409254 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
LIMS2-203ENST00000409254 MEGF6O75095 1541 aa17.31■□□□□ 0.36
LIMS2-203ENST00000409254 TNS2Q63HR2 1409 aa17.3■□□□□ 0.36
LIMS2-203ENST00000409254 SCN11AQ9UI33 1791 aa17.3■□□□□ 0.36
LIMS2-203ENST00000409254 NEFMP07197 916 aa17.3■□□□□ 0.36
LIMS2-203ENST00000409254 SULT6B1Q6IMI4 303 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms