RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MYOM3Q5VTT5 1437 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 GCOM1H8Y6P7 765 aaPredicted RBP14.29□□□□□ -0.12
SHANK2-203ENST00000409161 MYZAPP0CAP1 466 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 ARHGAP29Q52LW3 1261 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 KIAA1328Q86T90 577 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 NOL7Q9UMY1 257 aaKnown RBP14.29□□□□□ -0.12
SHANK2-203ENST00000409161 FYCO1Q9BQS8 1478 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 CCDC30Q5VVM6 783 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 TAF4BQ92750 862 aa14.29□□□□□ -0.12
SHANK2-203ENST00000409161 GNL3LQ9NVN8 582 aaKnown RBP14.29□□□□□ -0.12
SHANK2-203ENST00000409161 PPP1R12BO60237 982 aaPredicted RBP14.29□□□□□ -0.12
SHANK2-203ENST00000409161 BMP2KQ9NSY1 1161 aaPredicted RBP14.28□□□□□ -0.12
SHANK2-203ENST00000409161 RBM10P98175 930 aaKnown RBP14.28□□□□□ -0.12
SHANK2-203ENST00000409161 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
SHANK2-203ENST00000409161 WASF1Q92558 559 aa14.28□□□□□ -0.12
SHANK2-203ENST00000409161 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
SHANK2-203ENST00000409161 CEP131Q9UPN4 1083 aa14.28□□□□□ -0.12
SHANK2-203ENST00000409161 PDCL3Q9H2J4 239 aa14.28□□□□□ -0.12
SHANK2-203ENST00000409161 POLA1P09884 1462 aaPredicted RBP14.27□□□□□ -0.12
SHANK2-203ENST00000409161 NACAP1Q9BZK3 213 aa14.27□□□□□ -0.12
SHANK2-203ENST00000409161 KRT32Q14532 448 aa14.27□□□□□ -0.13
SHANK2-203ENST00000409161 VPS36Q86VN1 386 aa14.27□□□□□ -0.13
SHANK2-203ENST00000409161 NEUROD6Q96NK8 337 aa14.27□□□□□ -0.13
SHANK2-203ENST00000409161 NEMFO60524 1076 aa14.27□□□□□ -0.13
SHANK2-203ENST00000409161 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
SHANK2-203ENST00000409161 FHOD3Q2V2M9 1422 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-203ENST00000409161 BRPF3Q9ULD4 1205 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 KIF5CO60282 957 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 MCM5P33992 734 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 UPF3BQ9BZI7 483 aaKnown RBP14.26□□□□□ -0.13
SHANK2-203ENST00000409161 NUP62CLQ9H1M0 184 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 SMC1AQ14683 1233 aaKnown RBP14.26□□□□□ -0.13
SHANK2-203ENST00000409161 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 GNAI2P04899 355 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 SFPQP23246 707 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■□□□ 14.2
SHANK2-203ENST00000409161 IKQ13123 557 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-203ENST00000409161 CEP63Q96MT8 703 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
SHANK2-203ENST00000409161 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
SHANK2-203ENST00000409161 TAOK3Q9H2K8 898 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 CCT4P50991 539 aaKnown RBP14.25□□□□□ -0.13
SHANK2-203ENST00000409161 SPATA32Q96LK8 384 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 GOLGA6L9A6NEM1 432 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 FAM193AP78312 1265 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 MAP3K11Q16584 847 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 CFAP57Q96MR6 1250 aa14.25□□□□□ -0.13
SHANK2-203ENST00000409161 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
SHANK2-203ENST00000409161 FGFR1OPO95684 399 aaKnown RBP14.24□□□□□ -0.13
SHANK2-203ENST00000409161 ERICH4A6NGS2 130 aa14.24□□□□□ -0.13
SHANK2-203ENST00000409161 DDX12PQ92771 950 aa14.24□□□□□ -0.13
SHANK2-203ENST00000409161 SPA17Q15506 151 aa14.23□□□□□ -0.13
SHANK2-203ENST00000409161 CASQ1P31415 396 aa14.23□□□□□ -0.13
SHANK2-203ENST00000409161 TANGO6Q9C0B7 1094 aa14.23□□□□□ -0.13
SHANK2-203ENST00000409161 CAVIN2O95810 425 aa14.23□□□□□ -0.13
SHANK2-203ENST00000409161 SPECC1LQ69YQ0 1117 aa14.23□□□□□ -0.13
SHANK2-203ENST00000409161 KIF6Q6ZMV9 814 aa14.23□□□□□ -0.13
SHANK2-203ENST00000409161 PANK1Q8TE04 598 aa14.23□□□□□ -0.13
SHANK2-203ENST00000409161 LARP1BQ659C4 914 aaKnown RBP14.22□□□□□ -0.13
SHANK2-203ENST00000409161 CCDC69A6NI79 296 aa14.22□□□□□ -0.13
SHANK2-203ENST00000409161 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
SHANK2-203ENST00000409161 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.134e-9■■■■■ 39.3
SHANK2-203ENST00000409161 SMARCA4P51532 1647 aa14.22□□□□□ -0.13
SHANK2-203ENST00000409161 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
SHANK2-203ENST00000409161 NAA15Q9BXJ9 866 aaKnown RBP14.22□□□□□ -0.13
SHANK2-203ENST00000409161 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
SHANK2-203ENST00000409161 CCDC158Q5M9N0 1113 aa14.22□□□□□ -0.13
SHANK2-203ENST00000409161 CTNNA3Q9UI47 895 aa14.22□□□□□ -0.13
SHANK2-203ENST00000409161 CTAGE5O15320 804 aa14.22□□□□□ -0.13
SHANK2-203ENST00000409161 CCDC175P0C221 793 aa14.22□□□□□ -0.13
SHANK2-203ENST00000409161 AEBP2Q6ZN18 517 aaPredicted RBP14.21□□□□□ -0.13
SHANK2-203ENST00000409161 GSDMDP57764 484 aa14.21□□□□□ -0.13
SHANK2-203ENST00000409161 BBXQ8WY36 941 aaPredicted RBP14.21□□□□□ -0.14
SHANK2-203ENST00000409161 EIF5P55010 431 aaKnown RBP14.2□□□□□ -0.14
SHANK2-203ENST00000409161 PSME1Q06323 249 aa14.2□□□□□ -0.14
SHANK2-203ENST00000409161 C6orf163Q5TEZ5 329 aa14.2□□□□□ -0.14
SHANK2-203ENST00000409161 RAPGEF4Q8WZA2 1011 aa14.2□□□□□ -0.14
SHANK2-203ENST00000409161 ZNF428Q96B54 188 aa14.2□□□□□ -0.14
SHANK2-203ENST00000409161 CCDC183Q5T5S1 534 aa14.2□□□□□ -0.14
SHANK2-203ENST00000409161 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
SHANK2-203ENST00000409161 PRKCSHP14314 528 aaPredicted RBP14.19□□□□□ -0.14
SHANK2-203ENST00000409161 IFFO1Q0D2I5 559 aa14.19□□□□□ -0.14
SHANK2-203ENST00000409161 FAM177A1Q8N128 213 aaPredicted RBP14.19□□□□□ -0.14
SHANK2-203ENST00000409161 ANAPC15P60006 121 aa14.19□□□□□ -0.14
SHANK2-203ENST00000409161 DYNC1I1O14576 645 aa14.19□□□□□ -0.14
SHANK2-203ENST00000409161 BACH2Q9BYV9 841 aa14.19□□□□□ -0.14
SHANK2-203ENST00000409161 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
SHANK2-203ENST00000409161 IVLP07476 585 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 CFAP100Q494V2 611 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 EHBP1Q8NDI1 1231 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 TUBB4BP68371 445 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 FYB1O15117 783 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 TTC39AQ5SRH9 613 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 FKBP15Q5T1M5 1219 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms