RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 FNBP4Q8N3X1 1017 aaPredicted RBP20.54■□□□□ 0.88
SNRNP27-202ENST00000409116 BCL9LQ86UU0 1499 aa20.53■□□□□ 0.88
SNRNP27-202ENST00000409116 HOXC9P31274 260 aa20.53■□□□□ 0.88
SNRNP27-202ENST00000409116 IP6K1Q92551 441 aa20.53■□□□□ 0.88
SNRNP27-202ENST00000409116 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.88
SNRNP27-202ENST00000409116 ABCC6O95255 1503 aa20.52■□□□□ 0.88
SNRNP27-202ENST00000409116 RTL1A6NKG5 1358 aa20.52■□□□□ 0.88
SNRNP27-202ENST00000409116 NWD2Q9ULI1 1742 aa20.52■□□□□ 0.88
SNRNP27-202ENST00000409116 USP21Q9UK80 565 aa20.52■□□□□ 0.87
SNRNP27-202ENST00000409116 NRAPQ86VF7 1730 aa20.51■□□□□ 0.87
SNRNP27-202ENST00000409116 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
SNRNP27-202ENST00000409116 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
SNRNP27-202ENST00000409116 STRN4Q9NRL3 753 aa20.51■□□□□ 0.87
SNRNP27-202ENST00000409116 FLT4P35916 1363 aa20.5■□□□□ 0.87
SNRNP27-202ENST00000409116 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
SNRNP27-202ENST00000409116 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
SNRNP27-202ENST00000409116 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
SNRNP27-202ENST00000409116 UNC5CLQ8IV45 518 aa20.5■□□□□ 0.87
SNRNP27-202ENST00000409116 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
SNRNP27-202ENST00000409116 MTHFSP49914 203 aa20.49■□□□□ 0.87
SNRNP27-202ENST00000409116 RALBP1Q15311 655 aa20.49■□□□□ 0.87
SNRNP27-202ENST00000409116 LTV1Q96GA3 475 aaPredicted RBP20.49■□□□□ 0.87
SNRNP27-202ENST00000409116 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
SNRNP27-202ENST00000409116 RGS17Q9UGC6 210 aaPredicted RBP20.49■□□□□ 0.87
SNRNP27-202ENST00000409116 BLMP54132 1417 aaPredicted RBP20.48■□□□□ 0.87
SNRNP27-202ENST00000409116 EVA1CP58658 441 aa20.48■□□□□ 0.87
SNRNP27-202ENST00000409116 CDK12Q9NYV4 1490 aaPredicted RBP20.47■□□□□ 0.87
SNRNP27-202ENST00000409116 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
SNRNP27-202ENST00000409116 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
SNRNP27-202ENST00000409116 INSRP06213 1382 aa20.46■□□□□ 0.87
SNRNP27-202ENST00000409116 LARP1Q6PKG0 1096 aaKnown RBP20.46■□□□□ 0.87
SNRNP27-202ENST00000409116 ERBB3P21860 1342 aa20.45■□□□□ 0.86
SNRNP27-202ENST00000409116 ATRNO75882 1429 aa20.45■□□□□ 0.86
SNRNP27-202ENST00000409116 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
SNRNP27-202ENST00000409116 ZNF772Q68DY9 489 aaPredicted RBP20.45■□□□□ 0.86
SNRNP27-202ENST00000409116 ANP32CO43423 234 aa20.44■□□□□ 0.86
SNRNP27-202ENST00000409116 CCDC9Q9Y3X0 531 aaKnown RBP20.44■□□□□ 0.86
SNRNP27-202ENST00000409116 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
SNRNP27-202ENST00000409116 VPS72Q15906 364 aa20.43■□□□□ 0.86
SNRNP27-202ENST00000409116 QTRT2Q9H974 415 aaKnown RBP20.43■□□□□ 0.86
SNRNP27-202ENST00000409116 MYBBP1AQ9BQG0 1328 aaKnown RBP20.43■□□□□ 0.86
SNRNP27-202ENST00000409116 EIF4A2Q14240 407 aaKnown RBP20.42■□□□□ 0.86
SNRNP27-202ENST00000409116 POTEAQ6S8J7 498 aa20.42■□□□□ 0.86
SNRNP27-202ENST00000409116 TRPC5Q9UL62 973 aaPredicted RBP20.42■□□□□ 0.86
SNRNP27-202ENST00000409116 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
SNRNP27-202ENST00000409116 TOM1L2Q6ZVM7 507 aa20.41■□□□□ 0.86
SNRNP27-202ENST00000409116 CRB1P82279 1406 aa20.41■□□□□ 0.86
SNRNP27-202ENST00000409116 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
SNRNP27-202ENST00000409116 NLRP2Q9NX02 1062 aa20.4■□□□□ 0.86
SNRNP27-202ENST00000409116 USP35Q9P2H5 1018 aa20.4■□□□□ 0.86
SNRNP27-202ENST00000409116 SPATA31A5Q5VU36 1347 aa20.4■□□□□ 0.86
SNRNP27-202ENST00000409116 SPATA31A7Q8IWB4 1347 aa20.4■□□□□ 0.86
SNRNP27-202ENST00000409116 GJD4Q96KN9 370 aaPredicted RBP20.38■□□□□ 0.85
SNRNP27-202ENST00000409116 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
SNRNP27-202ENST00000409116 SPATA31A1Q5TZJ5 1347 aa20.38■□□□□ 0.85
SNRNP27-202ENST00000409116 GLI3P10071 1580 aa20.38■□□□□ 0.85
SNRNP27-202ENST00000409116 RGPD2P0DJD1 1756 aa20.38■□□□□ 0.85
SNRNP27-202ENST00000409116 NBPF6Q5VWK0 638 aa20.37■□□□□ 0.85
SNRNP27-202ENST00000409116 USHBP1Q8N6Y0 703 aa20.37■□□□□ 0.85
SNRNP27-202ENST00000409116 NBPF4Q96M43 638 aa20.37■□□□□ 0.85
SNRNP27-202ENST00000409116 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
SNRNP27-202ENST00000409116 FAM208AQ9UK61 1670 aaKnown RBP20.37■□□□□ 0.85
SNRNP27-202ENST00000409116 MSH5O43196 834 aa20.36■□□□□ 0.85
SNRNP27-202ENST00000409116 IL13P35225 146 aa20.36■□□□□ 0.85
SNRNP27-202ENST00000409116 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
SNRNP27-202ENST00000409116 TCP11L2Q8N4U5 519 aa20.34■□□□□ 0.85
SNRNP27-202ENST00000409116 EYA1Q99502 592 aa20.34■□□□□ 0.85
SNRNP27-202ENST00000409116 RBM6P78332 1123 aaKnown RBP20.33■□□□□ 0.85
SNRNP27-202ENST00000409116 FAM98CQ17RN3 349 aaKnown RBP20.33■□□□□ 0.85
SNRNP27-202ENST00000409116 RXRBP28702 533 aa20.32■□□□□ 0.84
SNRNP27-202ENST00000409116 IGSF1Q8N6C5 1336 aa20.32■□□□□ 0.84
SNRNP27-202ENST00000409116 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
SNRNP27-202ENST00000409116 RGPD1P0DJD0 1748 aa20.31■□□□□ 0.84
SNRNP27-202ENST00000409116 U2SURPO15042 1029 aaKnown RBP20.3■□□□□ 0.84
SNRNP27-202ENST00000409116 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
SNRNP27-202ENST00000409116 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
SNRNP27-202ENST00000409116 THRAP3Q9Y2W1 955 aaKnown RBP20.29■□□□□ 0.84
SNRNP27-202ENST00000409116 A0A0G2JS52 829 aa20.28■□□□□ 0.84
SNRNP27-202ENST00000409116 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
SNRNP27-202ENST00000409116 MYT1Q01538 1121 aa20.28■□□□□ 0.84
SNRNP27-202ENST00000409116 BARGINQ6ZT62 677 aa20.28■□□□□ 0.84
SNRNP27-202ENST00000409116 WNK3Q9BYP7 1800 aa20.28■□□□□ 0.84
SNRNP27-202ENST00000409116 MEGF6O75095 1541 aa20.27■□□□□ 0.84
SNRNP27-202ENST00000409116 THSD7AQ9UPZ6 1657 aa20.27■□□□□ 0.84
SNRNP27-202ENST00000409116 HMOX1P09601 288 aa20.27■□□□□ 0.83
SNRNP27-202ENST00000409116 SULT6B1Q6IMI4 303 aa20.27■□□□□ 0.83
SNRNP27-202ENST00000409116 NUDCQ9Y266 331 aa20.27■□□□□ 0.83
SNRNP27-202ENST00000409116 RGS12O14924 1447 aa20.26■□□□□ 0.83
SNRNP27-202ENST00000409116 IL2RBP14784 551 aa20.26■□□□□ 0.83
SNRNP27-202ENST00000409116 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
SNRNP27-202ENST00000409116 ONECUT3O60422 494 aaPredicted RBP20.25■□□□□ 0.83
SNRNP27-202ENST00000409116 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
SNRNP27-202ENST00000409116 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNRNP27-202ENST00000409116 SEPT12Q8IYM1 358 aa20.25■□□□□ 0.83
SNRNP27-202ENST00000409116 MIER1Q8N108 512 aa20.25■□□□□ 0.83
SNRNP27-202ENST00000409116 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
SNRNP27-202ENST00000409116 KDRP35968 1356 aa20.24■□□□□ 0.83
SNRNP27-202ENST00000409116 OVOS2A0A0G2JMS6 1433 aa20.22■□□□□ 0.83
SNRNP27-202ENST00000409116 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
SNRNP27-202ENST00000409116 LRRC37A3O60309 1634 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms