RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TOM1L2Q6ZVM7 507 aa12.72□□□□□ -0.37
SNORD88A-201ENST00000408314 ARHGEF25Q86VW2 580 aa12.72□□□□□ -0.37
SNORD88A-201ENST00000408314 TESK2Q96S53 571 aa12.72□□□□□ -0.37
SNORD88A-201ENST00000408314 PCGF6Q9BYE7 350 aa12.72□□□□□ -0.37
SNORD88A-201ENST00000408314 NFAT5O94916 1531 aa12.72□□□□□ -0.37
SNORD88A-201ENST00000408314 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
SNORD88A-201ENST00000408314 A0A1W2PP64 1363 aa12.71□□□□□ -0.37
SNORD88A-201ENST00000408314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNORD88A-201ENST00000408314 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.38
SNORD88A-201ENST00000408314 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
SNORD88A-201ENST00000408314 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
SNORD88A-201ENST00000408314 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
SNORD88A-201ENST00000408314 SLC12A5Q9H2X9 1139 aa12.7□□□□□ -0.38
SNORD88A-201ENST00000408314 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
SNORD88A-201ENST00000408314 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
SNORD88A-201ENST00000408314 COL18A1P39060 1754 aa12.69□□□□□ -0.38
SNORD88A-201ENST00000408314 SOX12O15370 315 aa12.69□□□□□ -0.38
SNORD88A-201ENST00000408314 DEFB132Q7Z7B7 95 aa12.68□□□□□ -0.38
SNORD88A-201ENST00000408314 NME9Q86XW9 330 aa12.68□□□□□ -0.38
SNORD88A-201ENST00000408314 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
SNORD88A-201ENST00000408314 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
SNORD88A-201ENST00000408314 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
SNORD88A-201ENST00000408314 DDB1Q16531 1140 aa12.67□□□□□ -0.38
SNORD88A-201ENST00000408314 CCER1Q8TC90 406 aaPredicted RBP12.67□□□□□ -0.38
SNORD88A-201ENST00000408314 COG3Q96JB2 828 aa12.67□□□□□ -0.38
SNORD88A-201ENST00000408314 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
SNORD88A-201ENST00000408314 WNK3Q9BYP7 1800 aa12.67□□□□□ -0.38
SNORD88A-201ENST00000408314 TNS1Q9HBL0 1735 aaKnown RBP12.66□□□□□ -0.38
SNORD88A-201ENST00000408314 LTN1O94822 1766 aa12.66□□□□□ -0.38
SNORD88A-201ENST00000408314 LRRC37A3O60309 1634 aa12.66□□□□□ -0.38
SNORD88A-201ENST00000408314 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
SNORD88A-201ENST00000408314 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
SNORD88A-201ENST00000408314 ERBB3P21860 1342 aa12.64□□□□□ -0.39
SNORD88A-201ENST00000408314 TRIM37O94972 964 aa12.64□□□□□ -0.39
SNORD88A-201ENST00000408314 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
SNORD88A-201ENST00000408314 APBA3O96018 575 aa12.63□□□□□ -0.39
SNORD88A-201ENST00000408314 RTL1A6NKG5 1358 aa12.63□□□□□ -0.39
SNORD88A-201ENST00000408314 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
SNORD88A-201ENST00000408314 BCL9O00512 1426 aa12.62□□□□□ -0.39
SNORD88A-201ENST00000408314 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
SNORD88A-201ENST00000408314 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
SNORD88A-201ENST00000408314 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
SNORD88A-201ENST00000408314 EXOC5O00471 708 aa12.61□□□□□ -0.39
SNORD88A-201ENST00000408314 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
SNORD88A-201ENST00000408314 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
SNORD88A-201ENST00000408314 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
SNORD88A-201ENST00000408314 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNORD88A-201ENST00000408314 IP6K1Q92551 441 aa12.6□□□□□ -0.39
SNORD88A-201ENST00000408314 RGPD3A6NKT7 1758 aaPredicted RBP12.6□□□□□ -0.39
SNORD88A-201ENST00000408314 RGPD4Q7Z3J3 1758 aa12.6□□□□□ -0.39
SNORD88A-201ENST00000408314 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
SNORD88A-201ENST00000408314 IL2RBP14784 551 aa12.59□□□□□ -0.39
SNORD88A-201ENST00000408314 AMPHP49418 695 aa12.59□□□□□ -0.39
SNORD88A-201ENST00000408314 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
SNORD88A-201ENST00000408314 CAMKK2Q96RR4 588 aa12.59□□□□□ -0.39
SNORD88A-201ENST00000408314 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
SNORD88A-201ENST00000408314 EZH2Q15910 746 aaKnown RBP12.58□□□□□ -0.4
SNORD88A-201ENST00000408314 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
SNORD88A-201ENST00000408314 LRP5O75197 1615 aa12.58□□□□□ -0.4
SNORD88A-201ENST00000408314 RREB1Q92766 1687 aa12.57□□□□□ -0.4
SNORD88A-201ENST00000408314 MYOM1P52179 1685 aa12.57□□□□□ -0.4
SNORD88A-201ENST00000408314 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
SNORD88A-201ENST00000408314 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
SNORD88A-201ENST00000408314 FYB1O15117 783 aa12.56□□□□□ -0.4
SNORD88A-201ENST00000408314 PLSCR1O15162 318 aa12.56□□□□□ -0.4
SNORD88A-201ENST00000408314 HOXC9P31274 260 aa12.56□□□□□ -0.4
SNORD88A-201ENST00000408314 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
SNORD88A-201ENST00000408314 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
SNORD88A-201ENST00000408314 CGNL1Q0VF96 1302 aa12.56□□□□□ -0.4
SNORD88A-201ENST00000408314 SBF2Q86WG5 1849 aa12.55□□□□□ -0.4
SNORD88A-201ENST00000408314 FLT4P35916 1363 aa12.55□□□□□ -0.4
SNORD88A-201ENST00000408314 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
SNORD88A-201ENST00000408314 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
SNORD88A-201ENST00000408314 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
SNORD88A-201ENST00000408314 R3HDM1Q15032 1099 aaKnown RBP12.53□□□□□ -0.4
SNORD88A-201ENST00000408314 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
SNORD88A-201ENST00000408314 NHSQ6T4R5 1651 aa12.53□□□□□ -0.4
SNORD88A-201ENST00000408314 INSRP06213 1382 aa12.53□□□□□ -0.4
SNORD88A-201ENST00000408314 HSPA5P11021 654 aaKnown RBP12.51□□□□□ -0.41
SNORD88A-201ENST00000408314 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
SNORD88A-201ENST00000408314 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
SNORD88A-201ENST00000408314 NSD2O96028 1365 aa12.51□□□□□ -0.41
SNORD88A-201ENST00000408314 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
SNORD88A-201ENST00000408314 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
SNORD88A-201ENST00000408314 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
SNORD88A-201ENST00000408314 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
SNORD88A-201ENST00000408314 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
SNORD88A-201ENST00000408314 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
SNORD88A-201ENST00000408314 TXNRD1Q16881 649 aa12.47□□□□□ -0.41
SNORD88A-201ENST00000408314 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
SNORD88A-201ENST00000408314 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
SNORD88A-201ENST00000408314 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
SNORD88A-201ENST00000408314 HSP90AB2PQ58FF8 381 aa12.46□□□□□ -0.41
SNORD88A-201ENST00000408314 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.41
SNORD88A-201ENST00000408314 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.41
SNORD88A-201ENST00000408314 NBPF4Q96M43 638 aa12.46□□□□□ -0.41
SNORD88A-201ENST00000408314 MEGF6O75095 1541 aa12.46□□□□□ -0.42
SNORD88A-201ENST00000408314 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
SNORD88A-201ENST00000408314 WASHC2AQ641Q2 1341 aa12.45□□□□□ -0.42
SNORD88A-201ENST00000408314 PPM1GO15355 546 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms