RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 WNT7AO00755 349 aa12.12□□□□□ -0.47
PTPN12-202ENST00000407343 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
PTPN12-202ENST00000407343 EHBP1Q8NDI1 1231 aa12.12□□□□□ -0.47
PTPN12-202ENST00000407343 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
PTPN12-202ENST00000407343 RFX1P22670 979 aa12.11□□□□□ -0.47
PTPN12-202ENST00000407343 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
PTPN12-202ENST00000407343 PLEKHM2Q8IWE5 1019 aa12.11□□□□□ -0.47
PTPN12-202ENST00000407343 HOMEZQ8IX15 550 aa12.11□□□□□ -0.47
PTPN12-202ENST00000407343 MPNDQ8N594 471 aa12.11□□□□□ -0.47
PTPN12-202ENST00000407343 PKD2L1Q9P0L9 805 aa12.11□□□□□ -0.47
PTPN12-202ENST00000407343 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
PTPN12-202ENST00000407343 SKIP12755 728 aa12.1□□□□□ -0.47
PTPN12-202ENST00000407343 SLFNL1Q499Z3 407 aa12.1□□□□□ -0.47
PTPN12-202ENST00000407343 KANK4Q5T7N3 995 aaPredicted RBP12.1□□□□□ -0.47
PTPN12-202ENST00000407343 PLPP7Q8NBV4 271 aa12.1□□□□□ -0.47
PTPN12-202ENST00000407343 PBXIP1Q96AQ6 731 aa12.1□□□□□ -0.47
PTPN12-202ENST00000407343 MRGPRX2Q96LB1 330 aa12.1□□□□□ -0.47
PTPN12-202ENST00000407343 CDV3Q9UKY7 258 aaKnown RBP12.1□□□□□ -0.47
PTPN12-202ENST00000407343 TLL2Q9Y6L7 1015 aa12.1□□□□□ -0.47
PTPN12-202ENST00000407343 USP17L3A6NCW0 530 aa12.09□□□□□ -0.47
PTPN12-202ENST00000407343 USP17L4A6NCW7 530 aa12.09□□□□□ -0.47
PTPN12-202ENST00000407343 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
PTPN12-202ENST00000407343 USP17L1Q7RTZ2 530 aa12.09□□□□□ -0.47
PTPN12-202ENST00000407343 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
PTPN12-202ENST00000407343 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
PTPN12-202ENST00000407343 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
PTPN12-202ENST00000407343 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
PTPN12-202ENST00000407343 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
PTPN12-202ENST00000407343 GRM5P41594 1212 aa12.08□□□□□ -0.48
PTPN12-202ENST00000407343 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
PTPN12-202ENST00000407343 ZNF697Q5TEC3 545 aa12.08□□□□□ -0.48
PTPN12-202ENST00000407343 INTS6LQ5JSJ4 861 aaKnown RBP12.07□□□□□ -0.48
PTPN12-202ENST00000407343 DEPDC4Q8N2C3 294 aa12.07□□□□□ -0.48
PTPN12-202ENST00000407343 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
PTPN12-202ENST00000407343 CDCA7Q9BWT1 371 aaPredicted RBP12.06□□□□□ -0.48
PTPN12-202ENST00000407343 NCOA4Q13772 614 aa12.05□□□□□ -0.48
PTPN12-202ENST00000407343 VASH1Q7L8A9 365 aaPredicted RBP12.05□□□□□ -0.48
PTPN12-202ENST00000407343 GDF9O60383 454 aa12.04□□□□□ -0.48
PTPN12-202ENST00000407343 MAP7D1Q3KQU3 841 aa12.04□□□□□ -0.48
PTPN12-202ENST00000407343 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
PTPN12-202ENST00000407343 CDCA8Q53HL2 280 aa12.02□□□□□ -0.49
PTPN12-202ENST00000407343 RNF20Q5VTR2 975 aa12.02□□□□□ -0.49
PTPN12-202ENST00000407343 ERVH48-1M5A8F1 160 aa12.01□□□□□ -0.49
PTPN12-202ENST00000407343 LZTS3O60299 673 aaPredicted RBP12.01□□□□□ -0.49
PTPN12-202ENST00000407343 ATG7O95352 703 aa12.01□□□□□ -0.49
PTPN12-202ENST00000407343 ADH1CP00326 375 aa12.01□□□□□ -0.49
PTPN12-202ENST00000407343 NR3C2P08235 984 aa12.01□□□□□ -0.49
PTPN12-202ENST00000407343 FSHRP23945 695 aa12.01□□□□□ -0.49
PTPN12-202ENST00000407343 DOLKQ9UPQ8 538 aa12.01□□□□□ -0.49
PTPN12-202ENST00000407343 ARID5BQ14865 1188 aa12□□□□□ -0.49
PTPN12-202ENST00000407343 RETREG2Q8NC44 543 aa12□□□□□ -0.49
PTPN12-202ENST00000407343 FOXC1Q12948 553 aa11.99□□□□□ -0.49
PTPN12-202ENST00000407343 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
PTPN12-202ENST00000407343 MKRN1Q9UHC7 482 aaKnown RBP11.99□□□□□ -0.49
PTPN12-202ENST00000407343 PCDHB11Q9Y5F2 797 aa11.99□□□□□ -0.49
PTPN12-202ENST00000407343 SCTRP47872 440 aa11.98□□□□□ -0.49
PTPN12-202ENST00000407343 RAB15P59190 212 aa11.98□□□□□ -0.49
PTPN12-202ENST00000407343 CCDC125Q86Z20 511 aa11.98□□□□□ -0.49
PTPN12-202ENST00000407343 DKK1O94907 266 aa11.97□□□□□ -0.49
PTPN12-202ENST00000407343 CLDN10P78369 228 aa11.97□□□□□ -0.49
PTPN12-202ENST00000407343 EML3Q32P44 896 aa11.97□□□□□ -0.49
PTPN12-202ENST00000407343 CRTC2Q53ET0 693 aaPredicted RBP11.97□□□□□ -0.49
PTPN12-202ENST00000407343 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
PTPN12-202ENST00000407343 TMPRSS4Q9NRS4 437 aa11.97□□□□□ -0.49
PTPN12-202ENST00000407343 TOR4AQ9NXH8 423 aa11.97□□□□□ -0.49
PTPN12-202ENST00000407343 ZMIZ1Q9ULJ6 1067 aa11.97□□□□□ -0.49
PTPN12-202ENST00000407343 NR5A1Q13285 461 aa11.96□□□□□ -0.49
PTPN12-202ENST00000407343 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
PTPN12-202ENST00000407343 ZBTB7BO15156 539 aaPredicted RBP11.95□□□□□ -0.5
PTPN12-202ENST00000407343 ERVK-9P63128 1117 aa11.95□□□□□ -0.5
PTPN12-202ENST00000407343 PTK7Q13308 1070 aa11.95□□□□□ -0.5
PTPN12-202ENST00000407343 ELOAQ14241 798 aaKnown RBP11.95□□□□□ -0.5
PTPN12-202ENST00000407343 KIAA1024Q9UPX6 916 aa11.95□□□□□ -0.5
PTPN12-202ENST00000407343 PCDHGA11Q9Y5H2 935 aa11.95□□□□□ -0.5
PTPN12-202ENST00000407343 LILRA1O75019 489 aa11.94□□□□□ -0.5
PTPN12-202ENST00000407343 PRR20EP86478 221 aa11.94□□□□□ -0.5
PTPN12-202ENST00000407343 PRR20CP86479 221 aa11.94□□□□□ -0.5
PTPN12-202ENST00000407343 PRR20DP86480 221 aa11.94□□□□□ -0.5
PTPN12-202ENST00000407343 PRR20BP86481 221 aa11.94□□□□□ -0.5
PTPN12-202ENST00000407343 PRR20AP86496 221 aa11.94□□□□□ -0.5
PTPN12-202ENST00000407343 PPP1R26Q5T8A7 1209 aaPredicted RBP11.94□□□□□ -0.5
PTPN12-202ENST00000407343 CCDC116Q8IYX3 515 aa11.94□□□□□ -0.5
PTPN12-202ENST00000407343 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L10C9JJH3 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L21D6R901 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 J3QL48 77 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 ALDH1A1P00352 501 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
PTPN12-202ENST00000407343 KLF16Q9BXK1 252 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms