RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 PTF1AQ7RTS3 328 aa30.15■■■□□ 2.42
RHBDD3-202ENST00000406335 MARCH10Q8NA82 808 aaPredicted RBP30.15■■■□□ 2.42
RHBDD3-202ENST00000406335 PARP4Q9UKK3 1724 aaKnown RBP30.14■■■□□ 2.42
RHBDD3-202ENST00000406335 TRIM26Q12899 539 aaPredicted RBP30.14■■■□□ 2.42
RHBDD3-202ENST00000406335 NINLQ9Y2I6 1382 aa30.14■■■□□ 2.41
RHBDD3-202ENST00000406335 ANO8Q9HCE9 1232 aaPredicted RBP30.13■■■□□ 2.41
RHBDD3-202ENST00000406335 TTC21BQ7Z4L5 1316 aa30.13■■■□□ 2.41
RHBDD3-202ENST00000406335 ZBTB7AO95365 584 aa30.12■■■□□ 2.41
RHBDD3-202ENST00000406335 ARHGEF25Q86VW2 580 aa30.12■■■□□ 2.41
RHBDD3-202ENST00000406335 L3MBTL2Q969R5 705 aa30.12■■■□□ 2.41
RHBDD3-202ENST00000406335 STK32BQ9NY57 414 aa30.12■■■□□ 2.41
RHBDD3-202ENST00000406335 CARD10Q9BWT7 1032 aa30.11■■■□□ 2.41
RHBDD3-202ENST00000406335 SLIT3O75094 1523 aa30.1■■■□□ 2.41
RHBDD3-202ENST00000406335 ATF5Q9Y2D1 282 aaPredicted RBP30.09■■■□□ 2.41
RHBDD3-202ENST00000406335 CPSF1Q10570 1443 aaKnown RBP30.08■■■□□ 2.41
RHBDD3-202ENST00000406335 NEUROD1Q13562 356 aa30.07■■■□□ 2.4
RHBDD3-202ENST00000406335 TXNRD1Q16881 649 aa30.07■■■□□ 2.4
RHBDD3-202ENST00000406335 PROM2Q8N271 834 aa30.07■■■□□ 2.4
RHBDD3-202ENST00000406335 QRICH2Q9H0J4 1663 aa30.07■■■□□ 2.4
RHBDD3-202ENST00000406335 TTC21AQ8NDW8 1320 aa30.06■■■□□ 2.4
RHBDD3-202ENST00000406335 PDGFDQ9GZP0 370 aaPredicted RBP30.06■■■□□ 2.4
RHBDD3-202ENST00000406335 ROCK2O75116 1388 aaKnown RBP30.04■■■□□ 2.4
RHBDD3-202ENST00000406335 LRRC37A3O60309 1634 aa30.04■■■□□ 2.4
RHBDD3-202ENST00000406335 KTN1Q86UP2 1357 aaKnown RBP30.03■■■□□ 2.4
RHBDD3-202ENST00000406335 SLC15A2Q16348 729 aa30.02■■■□□ 2.4
RHBDD3-202ENST00000406335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.02■■■□□ 2.4
RHBDD3-202ENST00000406335 PEAK1Q9H792 1746 aa30.01■■■□□ 2.39
RHBDD3-202ENST00000406335 CCDC7Q96M83 1385 aa30.01■■■□□ 2.39
RHBDD3-202ENST00000406335 TRPM1Q7Z4N2 1603 aa30■■■□□ 2.39
RHBDD3-202ENST00000406335 ACSBG1Q96GR2 724 aa30■■■□□ 2.39
RHBDD3-202ENST00000406335 NLRP2Q9NX02 1062 aa30■■■□□ 2.39
RHBDD3-202ENST00000406335 BCL9O00512 1426 aa29.98■■■□□ 2.39
RHBDD3-202ENST00000406335 PIK3C2AO00443 1686 aa29.98■■■□□ 2.39
RHBDD3-202ENST00000406335 TMC1Q8TDI8 760 aa29.96■■■□□ 2.39
RHBDD3-202ENST00000406335 PTGER2P43116 358 aa29.95■■■□□ 2.39
RHBDD3-202ENST00000406335 FHDC1Q9C0D6 1143 aaPredicted RBP29.94■■■□□ 2.38
RHBDD3-202ENST00000406335 MTFR1LQ9H019 292 aa29.94■■■□□ 2.38
RHBDD3-202ENST00000406335 COL18A1P39060 1754 aa29.94■■■□□ 2.38
RHBDD3-202ENST00000406335 RGPD3A6NKT7 1758 aaPredicted RBP29.92■■■□□ 2.38
RHBDD3-202ENST00000406335 RGPD4Q7Z3J3 1758 aa29.92■■■□□ 2.38
RHBDD3-202ENST00000406335 IL2RBP14784 551 aa29.92■■■□□ 2.38
RHBDD3-202ENST00000406335 SYT17Q9BSW7 474 aa29.92■■■□□ 2.38
RHBDD3-202ENST00000406335 SBF2Q86WG5 1849 aa29.9■■■□□ 2.38
RHBDD3-202ENST00000406335 HDGFL2Q7Z4V5 671 aaPredicted RBP29.9■■■□□ 2.38
RHBDD3-202ENST00000406335 NME9Q86XW9 330 aa29.89■■■□□ 2.38
RHBDD3-202ENST00000406335 ANKRD24Q8TF21 1146 aa29.88■■■□□ 2.37
RHBDD3-202ENST00000406335 TNS2Q63HR2 1409 aa29.88■■■□□ 2.37
RHBDD3-202ENST00000406335 AKAP12Q02952 1782 aa29.86■■■□□ 2.37
RHBDD3-202ENST00000406335 ERBB3P21860 1342 aa29.86■■■□□ 2.37
RHBDD3-202ENST00000406335 ARXQ96QS3 562 aa29.85■■■□□ 2.37
RHBDD3-202ENST00000406335 CARD11Q9BXL7 1154 aa29.85■■■□□ 2.37
RHBDD3-202ENST00000406335 CASZ1Q86V15 1759 aa29.85■■■□□ 2.37
RHBDD3-202ENST00000406335 NFAT5O94916 1531 aa29.83■■■□□ 2.37
RHBDD3-202ENST00000406335 ZNF784Q8NCA9 323 aaPredicted RBP29.83■■■□□ 2.37
RHBDD3-202ENST00000406335 USP31Q70CQ4 1352 aa29.82■■■□□ 2.36
RHBDD3-202ENST00000406335 KLHL34Q8N239 644 aa29.82■■■□□ 2.36
RHBDD3-202ENST00000406335 DDX54Q8TDD1 881 aaKnown RBP29.82■■■□□ 2.36
RHBDD3-202ENST00000406335 WNK3Q9BYP7 1800 aa29.82■■■□□ 2.36
RHBDD3-202ENST00000406335 LTV1Q96GA3 475 aaPredicted RBP29.81■■■□□ 2.36
RHBDD3-202ENST00000406335 SLC12A5Q9H2X9 1139 aa29.81■■■□□ 2.36
RHBDD3-202ENST00000406335 RGPD5Q99666 1765 aa29.81■■■□□ 2.36
RHBDD3-202ENST00000406335 TERF2IPQ9NYB0 399 aa29.8■■■□□ 2.36
RHBDD3-202ENST00000406335 MYOM1P52179 1685 aa29.79■■■□□ 2.36
RHBDD3-202ENST00000406335 TONSLQ96HA7 1378 aa29.77■■■□□ 2.36
RHBDD3-202ENST00000406335 ABCC6O95255 1503 aa29.77■■■□□ 2.36
RHBDD3-202ENST00000406335 GPR162Q16538 588 aa29.77■■■□□ 2.36
RHBDD3-202ENST00000406335 SYTL4Q96C24 671 aaPredicted RBP29.77■■■□□ 2.36
RHBDD3-202ENST00000406335 SGIP1Q9BQI5 828 aa29.76■■■□□ 2.35
RHBDD3-202ENST00000406335 ZNF827Q17R98 1081 aa29.75■■■□□ 2.35
RHBDD3-202ENST00000406335 SBNO2Q9Y2G9 1366 aa29.75■■■□□ 2.35
RHBDD3-202ENST00000406335 POLD1P28340 1107 aa29.74■■■□□ 2.35
RHBDD3-202ENST00000406335 PELP1Q8IZL8 1130 aaKnown RBP29.73■■■□□ 2.35
RHBDD3-202ENST00000406335 LRRC4BQ9NT99 713 aa29.73■■■□□ 2.35
RHBDD3-202ENST00000406335 SLC27A3Q5K4L6 730 aa29.71■■■□□ 2.35
RHBDD3-202ENST00000406335 IP6K1Q92551 441 aa29.71■■■□□ 2.35
RHBDD3-202ENST00000406335 TFCP2L1Q9NZI6 479 aa29.71■■■□□ 2.35
RHBDD3-202ENST00000406335 NHSQ6T4R5 1651 aa29.7■■■□□ 2.35
RHBDD3-202ENST00000406335 EDC4Q6P2E9 1401 aaKnown RBP29.7■■■□□ 2.34
RHBDD3-202ENST00000406335 SLC16A10Q8TF71 515 aa29.69■■■□□ 2.34
RHBDD3-202ENST00000406335 AMPHP49418 695 aa29.68■■■□□ 2.34
RHBDD3-202ENST00000406335 SENP3-EIF4A1A0A087X0R7 540 aa29.67■■■□□ 2.34
RHBDD3-202ENST00000406335 COG3Q96JB2 828 aa29.67■■■□□ 2.34
RHBDD3-202ENST00000406335 CD163L1Q9NR16 1453 aa29.67■■■□□ 2.34
RHBDD3-202ENST00000406335 PRIM1P49642 420 aaKnown RBP29.66■■■□□ 2.34
RHBDD3-202ENST00000406335 AKT1S1Q96B36 256 aa29.66■■■□□ 2.34
RHBDD3-202ENST00000406335 MON2Q7Z3U7 1717 aa29.65■■■□□ 2.34
RHBDD3-202ENST00000406335 MSH5O43196 834 aa29.65■■■□□ 2.34
RHBDD3-202ENST00000406335 KCNQ4P56696 695 aa29.65■■■□□ 2.34
RHBDD3-202ENST00000406335 A0A1W2PP64 1363 aa29.64■■■□□ 2.34
RHBDD3-202ENST00000406335 PCGF6Q9BYE7 350 aa29.64■■■□□ 2.34
RHBDD3-202ENST00000406335 ZCRB1Q8TBF4 217 aaKnown RBP29.62■■■□□ 2.33
RHBDD3-202ENST00000406335 MAP3K5Q99683 1374 aa29.62■■■□□ 2.33
RHBDD3-202ENST00000406335 C1QTNF8P60827 252 aa29.61■■■□□ 2.33
RHBDD3-202ENST00000406335 PUS7Q96PZ0 661 aaKnown RBP29.61■■■□□ 2.33
RHBDD3-202ENST00000406335 PNPLA7Q6ZV29 1317 aa29.6■■■□□ 2.33
RHBDD3-202ENST00000406335 HOXC9P31274 260 aa29.59■■■□□ 2.33
RHBDD3-202ENST00000406335 BTAF1O14981 1849 aa29.58■■■□□ 2.33
RHBDD3-202ENST00000406335 LTN1O94822 1766 aa29.58■■■□□ 2.33
RHBDD3-202ENST00000406335 CCNL1Q9UK58 526 aaPredicted RBP29.58■■■□□ 2.33
RHBDD3-202ENST00000406335 MAP3K19Q56UN5 1328 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms