RNA–Protein interactions for RNA: ENST00000404826.6

SDK1-202, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SDK1, Length 10,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-202ENST00000404826 GTPBP4Q9BZE4 634 aaKnown RBP21.16■□□□□ 0.98
SDK1-202ENST00000404826 ZMYND15Q9H091 742 aa21.16■□□□□ 0.98
SDK1-202ENST00000404826 IFFO1Q0D2I5 559 aa21.16■□□□□ 0.98
SDK1-202ENST00000404826 RNF168Q8IYW5 571 aaPredicted RBP21.16■□□□□ 0.98
SDK1-202ENST00000404826 FAM184BQ9ULE4 1060 aa21.16■□□□□ 0.98
SDK1-202ENST00000404826 FIBPO43427 364 aa21.15■□□□□ 0.98
SDK1-202ENST00000404826 CCDC27Q2M243 656 aa21.15■□□□□ 0.98
SDK1-202ENST00000404826 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
SDK1-202ENST00000404826 LIG1P18858 919 aa21.15■□□□□ 0.98
SDK1-202ENST00000404826 PRIMPOLQ96LW4 560 aa21.15■□□□□ 0.98
SDK1-202ENST00000404826 SUDS3Q9H7L9 328 aaPredicted RBP21.15■□□□□ 0.98
SDK1-202ENST00000404826 G3BP1Q13283 466 aaKnown RBP eCLIP21.15■□□□□ 0.98
SDK1-202ENST00000404826 NOL3O60936 208 aaKnown RBP21.15■□□□□ 0.98
SDK1-202ENST00000404826 SH2D4BQ5SQS7 431 aa21.14■□□□□ 0.98
SDK1-202ENST00000404826 NAA15Q9BXJ9 866 aaKnown RBP21.14■□□□□ 0.98
SDK1-202ENST00000404826 MYH10P35580 1976 aa21.14■□□□□ 0.98
SDK1-202ENST00000404826 KRT85P78386 507 aa21.14■□□□□ 0.97
SDK1-202ENST00000404826 BRPF1P55201 1214 aaPredicted RBP21.14■□□□□ 0.97
SDK1-202ENST00000404826 CCDC6Q16204 474 aa21.14■□□□□ 0.97
SDK1-202ENST00000404826 RBM25P49756 843 aaKnown RBP21.13■□□□□ 0.97
SDK1-202ENST00000404826 RNF187Q5TA31 235 aaPredicted RBP21.13■□□□□ 0.97
SDK1-202ENST00000404826 A0A1B0GUA9 196 aa21.13■□□□□ 0.97
SDK1-202ENST00000404826 GRIPAP1Q4V328 841 aa21.13■□□□□ 0.97
SDK1-202ENST00000404826 VPS36Q86VN1 386 aa21.13■□□□□ 0.97
SDK1-202ENST00000404826 NSRP1Q9H0G5 558 aaKnown RBP21.13■□□□□ 0.97
SDK1-202ENST00000404826 CASQ1P31415 396 aa21.13■□□□□ 0.97
SDK1-202ENST00000404826 KRT222Q8N1A0 295 aa21.13■□□□□ 0.97
SDK1-202ENST00000404826 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
SDK1-202ENST00000404826 SREK1Q8WXA9 508 aaKnown RBP21.13■□□□□ 0.97
SDK1-202ENST00000404826 CNTROBQ8N137 903 aa21.13■□□□□ 0.97
SDK1-202ENST00000404826 SMARCC1Q92922 1105 aaPredicted RBP21.13■□□□□ 0.97
SDK1-202ENST00000404826 PAXBP1Q9Y5B6 917 aa21.12■□□□□ 0.97
SDK1-202ENST00000404826 PRPF40AO75400 957 aaKnown RBP21.12■□□□□ 0.97
SDK1-202ENST00000404826 MSL1Q68DK7 614 aa21.12■□□□□ 0.97
SDK1-202ENST00000404826 CUX2O14529 1486 aa21.12■□□□□ 0.97
SDK1-202ENST00000404826 MIPOL1Q8TD10 442 aa21.12■□□□□ 0.97
SDK1-202ENST00000404826 TCHPQ9BT92 498 aa21.12■□□□□ 0.97
SDK1-202ENST00000404826 DNAI2Q9GZS0 605 aa21.11■□□□□ 0.97
SDK1-202ENST00000404826 PRDM10Q9NQV6 1147 aa21.11■□□□□ 0.97
SDK1-202ENST00000404826 CBX1P83916 185 aa21.1■□□□□ 0.97
SDK1-202ENST00000404826 C1orf141Q5JVX7 400 aa21.1■□□□□ 0.97
SDK1-202ENST00000404826 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
SDK1-202ENST00000404826 CEP112Q8N8E3 955 aa21.09■□□□□ 0.97
SDK1-202ENST00000404826 TNNT1P13805 278 aa21.09■□□□□ 0.97
SDK1-202ENST00000404826 STK38Q15208 465 aa21.09■□□□□ 0.97
SDK1-202ENST00000404826 CAVIN2O95810 425 aa21.09■□□□□ 0.97
SDK1-202ENST00000404826 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
SDK1-202ENST00000404826 USH1CQ9Y6N9 552 aa21.09■□□□□ 0.97
SDK1-202ENST00000404826 PANK3Q9H999 370 aa21.08■□□□□ 0.97
SDK1-202ENST00000404826 PPP1R12BO60237 982 aaPredicted RBP21.08■□□□□ 0.96
SDK1-202ENST00000404826 EHBP1Q8NDI1 1231 aa21.08■□□□□ 0.96
SDK1-202ENST00000404826 LNPKQ9C0E8 428 aa21.08■□□□□ 0.96
SDK1-202ENST00000404826 TTC31Q49AM3 519 aaPredicted RBP21.07■□□□□ 0.96
SDK1-202ENST00000404826 HOOK3Q86VS8 718 aa21.07■□□□□ 0.96
SDK1-202ENST00000404826 TTC5Q8N0Z6 440 aa21.07■□□□□ 0.96
SDK1-202ENST00000404826 DDX58O95786 925 aaKnown RBP21.07■□□□□ 0.96
SDK1-202ENST00000404826 SLC3A2P08195 630 aaKnown RBP21.07■□□□□ 0.96
SDK1-202ENST00000404826 ANAPC15P60006 121 aa21.07■□□□□ 0.96
SDK1-202ENST00000404826 SPA17Q15506 151 aa21.07■□□□□ 0.96
SDK1-202ENST00000404826 FERP16591 822 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 GSDMDP57764 484 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 SEPT14Q6ZU15 432 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 LTV1Q96GA3 475 aaPredicted RBP21.06■□□□□ 0.96
SDK1-202ENST00000404826 PPP4R3BQ5MIZ7 849 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 STMN4Q9H169 189 aaPredicted RBP21.06■□□□□ 0.96
SDK1-202ENST00000404826 CARMIL1Q5VZK9 1371 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 PLEKHH1Q9ULM0 1364 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 FAM177A1Q8N128 213 aaPredicted RBP21.06■□□□□ 0.96
SDK1-202ENST00000404826 L3MBTL2Q969R5 705 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 ZBTB17Q13105 803 aa21.06■□□□□ 0.96
SDK1-202ENST00000404826 CDKL5O76039 1030 aa21.05■□□□□ 0.96
SDK1-202ENST00000404826 UPF3BQ9BZI7 483 aaKnown RBP21.05■□□□□ 0.96
SDK1-202ENST00000404826 CCDC158Q5M9N0 1113 aa21.05■□□□□ 0.96
SDK1-202ENST00000404826 ZHX1Q9UKY1 873 aaPredicted RBP21.05■□□□□ 0.96
SDK1-202ENST00000404826 GBP6Q6ZN66 633 aa21.05■□□□□ 0.96
SDK1-202ENST00000404826 NACADO15069 1562 aa21.05■□□□□ 0.96
SDK1-202ENST00000404826 ME1P48163 572 aa21.05■□□□□ 0.96
SDK1-202ENST00000404826 GTF2F1P35269 517 aaKnown RBP eCLIP21.05■□□□□ 0.96
SDK1-202ENST00000404826 KRT18P05783 430 aaKnown RBP21.04■□□□□ 0.96
SDK1-202ENST00000404826 KIF5BP33176 963 aa21.04■□□□□ 0.96
SDK1-202ENST00000404826 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
SDK1-202ENST00000404826 TTC14Q96N46 770 aa21.04■□□□□ 0.96
SDK1-202ENST00000404826 ALS2CR12Q96Q35 445 aa21.03■□□□□ 0.96
SDK1-202ENST00000404826 CCDC113Q9H0I3 377 aa21.03■□□□□ 0.96
SDK1-202ENST00000404826 NGDNQ8NEJ9 315 aaKnown RBP21.03■□□□□ 0.96
SDK1-202ENST00000404826 SOGA1O94964 1423 aa21.03■□□□□ 0.96
SDK1-202ENST00000404826 MPHOSPH10O00566 681 aaKnown RBP21.03■□□□□ 0.96
SDK1-202ENST00000404826 FBF1Q8TES7 1133 aa21.03■□□□□ 0.96
SDK1-202ENST00000404826 GSTTP1A0A1W2PQM5 241 aa21.03■□□□□ 0.96
SDK1-202ENST00000404826 COG3Q96JB2 828 aa21.03■□□□□ 0.96
SDK1-202ENST00000404826 LMAN1P49257 510 aa21.02■□□□□ 0.96
SDK1-202ENST00000404826 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.96
SDK1-202ENST00000404826 CCDC160A6NGH7 325 aa21.02■□□□□ 0.96
SDK1-202ENST00000404826 ELL2O00472 640 aaPredicted RBP21.02■□□□□ 0.96
SDK1-202ENST00000404826 TRIM22Q8IYM9 498 aa21.02■□□□□ 0.96
SDK1-202ENST00000404826 FSD2A1L4K1 749 aa21.01■□□□□ 0.95
SDK1-202ENST00000404826 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
SDK1-202ENST00000404826 MAP3K11Q16584 847 aa21.01■□□□□ 0.95
SDK1-202ENST00000404826 MLECQ14165 292 aa21.01■□□□□ 0.95
SDK1-202ENST00000404826 SOGA3Q5TF21 947 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms