RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 RGPD5Q99666 1765 aa22.97■■□□□ 1.27
CGREF1-205ENST00000404694 KRT27Q7Z3Y8 459 aa22.96■■□□□ 1.27
CGREF1-205ENST00000404694 LTN1O94822 1766 aa22.95■■□□□ 1.26
CGREF1-205ENST00000404694 ABCC6O95255 1503 aa22.95■■□□□ 1.26
CGREF1-205ENST00000404694 EIF4G2P78344 907 aaKnown RBP eCLIP22.94■■□□□ 1.26
CGREF1-205ENST00000404694 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
CGREF1-205ENST00000404694 CRB1P82279 1406 aa22.93■■□□□ 1.26
CGREF1-205ENST00000404694 AXIN2Q9Y2T1 843 aa22.93■■□□□ 1.26
CGREF1-205ENST00000404694 HSPA5P11021 654 aaKnown RBP22.91■■□□□ 1.26
CGREF1-205ENST00000404694 BARGINQ6ZT62 677 aa22.91■■□□□ 1.26
CGREF1-205ENST00000404694 TCP11L2Q8N4U5 519 aa22.9■■□□□ 1.26
CGREF1-205ENST00000404694 THRAP3Q9Y2W1 955 aaKnown RBP22.89■■□□□ 1.26
CGREF1-205ENST00000404694 KIF20BQ96Q89 1820 aa22.89■■□□□ 1.25
CGREF1-205ENST00000404694 WDR17Q8IZU2 1322 aa22.89■■□□□ 1.25
CGREF1-205ENST00000404694 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
CGREF1-205ENST00000404694 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
CGREF1-205ENST00000404694 WNK3Q9BYP7 1800 aa22.88■■□□□ 1.25
CGREF1-205ENST00000404694 CCDC125Q86Z20 511 aa22.88■■□□□ 1.25
CGREF1-205ENST00000404694 COG3Q96JB2 828 aa22.87■■□□□ 1.25
CGREF1-205ENST00000404694 TOM1L2Q6ZVM7 507 aa22.86■■□□□ 1.25
CGREF1-205ENST00000404694 FAM182BQ5T319 152 aa22.84■■□□□ 1.25
CGREF1-205ENST00000404694 NSD3Q9BZ95 1437 aa22.83■■□□□ 1.25
CGREF1-205ENST00000404694 LRRC37A3O60309 1634 aa22.83■■□□□ 1.25
CGREF1-205ENST00000404694 FYB1O15117 783 aa22.83■■□□□ 1.25
CGREF1-205ENST00000404694 CSB-PGBD3P0DP91 1061 aa22.82■■□□□ 1.24
CGREF1-205ENST00000404694 CARD14Q9BXL6 1004 aa22.82■■□□□ 1.24
CGREF1-205ENST00000404694 GGNBP2Q9H3C7 697 aa22.82■■□□□ 1.24
CGREF1-205ENST00000404694 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
CGREF1-205ENST00000404694 ERBB3P21860 1342 aa22.82■■□□□ 1.24
CGREF1-205ENST00000404694 POLR3GLQ9BT43 218 aa22.81■■□□□ 1.24
CGREF1-205ENST00000404694 ZNF316A6NFI3 1004 aaPredicted RBP22.8■■□□□ 1.24
CGREF1-205ENST00000404694 CARD10Q9BWT7 1032 aa22.8■■□□□ 1.24
CGREF1-205ENST00000404694 PDE3BQ13370 1112 aa22.78■■□□□ 1.24
CGREF1-205ENST00000404694 TNS1Q9HBL0 1735 aaKnown RBP22.78■■□□□ 1.24
CGREF1-205ENST00000404694 MAP3K19Q56UN5 1328 aa22.78■■□□□ 1.24
CGREF1-205ENST00000404694 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
CGREF1-205ENST00000404694 FBLN1P23142 703 aa22.77■■□□□ 1.24
CGREF1-205ENST00000404694 SF3B2Q13435 895 aaKnown RBP22.77■■□□□ 1.24
CGREF1-205ENST00000404694 IP6K1Q92551 441 aa22.77■■□□□ 1.24
CGREF1-205ENST00000404694 FAM208AQ9UK61 1670 aaKnown RBP22.77■■□□□ 1.24
CGREF1-205ENST00000404694 CCDC7Q96M83 1385 aa22.77■■□□□ 1.24
CGREF1-205ENST00000404694 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
CGREF1-205ENST00000404694 FAM196AQ6ZSG2 479 aa22.76■■□□□ 1.23
CGREF1-205ENST00000404694 DEFB132Q7Z7B7 95 aa22.76■■□□□ 1.23
CGREF1-205ENST00000404694 PEAK1Q9H792 1746 aa22.75■■□□□ 1.23
CGREF1-205ENST00000404694 C11orf95C9JLR9 678 aaPredicted RBP22.75■■□□□ 1.23
CGREF1-205ENST00000404694 CDCA7Q9BWT1 371 aaPredicted RBP22.75■■□□□ 1.23
CGREF1-205ENST00000404694 DDB1Q16531 1140 aa22.74■■□□□ 1.23
CGREF1-205ENST00000404694 RTL1A6NKG5 1358 aa22.73■■□□□ 1.23
CGREF1-205ENST00000404694 HOXC9P31274 260 aa22.73■■□□□ 1.23
CGREF1-205ENST00000404694 RRS1Q15050 365 aaKnown RBP22.73■■□□□ 1.23
CGREF1-205ENST00000404694 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
CGREF1-205ENST00000404694 CGNL1Q0VF96 1302 aa22.73■■□□□ 1.23
CGREF1-205ENST00000404694 ANKRD26Q9UPS8 1709 aa22.72■■□□□ 1.23
CGREF1-205ENST00000404694 AMPHP49418 695 aa22.72■■□□□ 1.23
CGREF1-205ENST00000404694 BAG6P46379 1132 aa22.71■■□□□ 1.23
CGREF1-205ENST00000404694 OVOS2A0A0G2JMS6 1433 aa22.71■■□□□ 1.23
CGREF1-205ENST00000404694 RGPD2P0DJD1 1756 aa22.69■■□□□ 1.22
CGREF1-205ENST00000404694 TNS2Q63HR2 1409 aa22.69■■□□□ 1.22
CGREF1-205ENST00000404694 TRIM37O94972 964 aa22.69■■□□□ 1.22
CGREF1-205ENST00000404694 LTV1Q96GA3 475 aaPredicted RBP22.69■■□□□ 1.22
CGREF1-205ENST00000404694 PANK3Q9H999 370 aa22.68■■□□□ 1.22
CGREF1-205ENST00000404694 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
CGREF1-205ENST00000404694 KIF24Q5T7B8 1368 aa22.67■■□□□ 1.22
CGREF1-205ENST00000404694 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
CGREF1-205ENST00000404694 FLT4P35916 1363 aa22.66■■□□□ 1.22
CGREF1-205ENST00000404694 IL2RBP14784 551 aa22.65■■□□□ 1.22
CGREF1-205ENST00000404694 EXOC5O00471 708 aa22.64■■□□□ 1.22
CGREF1-205ENST00000404694 EN1Q05925 392 aaPredicted RBP22.64■■□□□ 1.22
CGREF1-205ENST00000404694 MARCH10Q8NA82 808 aaPredicted RBP22.64■■□□□ 1.22
CGREF1-205ENST00000404694 MAP2P11137 1827 aaKnown RBP22.63■■□□□ 1.21
CGREF1-205ENST00000404694 BCL9O00512 1426 aa22.63■■□□□ 1.21
CGREF1-205ENST00000404694 SMG6Q86US8 1419 aaKnown RBP22.63■■□□□ 1.21
CGREF1-205ENST00000404694 INSRP06213 1382 aa22.63■■□□□ 1.21
CGREF1-205ENST00000404694 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
CGREF1-205ENST00000404694 APBA3O96018 575 aa22.61■■□□□ 1.21
CGREF1-205ENST00000404694 HSP90AB2PQ58FF8 381 aa22.61■■□□□ 1.21
CGREF1-205ENST00000404694 NSD2O96028 1365 aa22.61■■□□□ 1.21
CGREF1-205ENST00000404694 RREB1Q92766 1687 aa22.59■■□□□ 1.21
CGREF1-205ENST00000404694 SRCAPQ6ZRS2 3230 aa22.58■■□□□ 1.21
CGREF1-205ENST00000404694 EZH2Q15910 746 aaKnown RBP22.58■■□□□ 1.21
CGREF1-205ENST00000404694 NBPF6Q5VWK0 638 aa22.58■■□□□ 1.21
CGREF1-205ENST00000404694 NBPF4Q96M43 638 aa22.58■■□□□ 1.21
CGREF1-205ENST00000404694 CAMKK2Q96RR4 588 aa22.58■■□□□ 1.21
CGREF1-205ENST00000404694 PARD3Q8TEW0 1356 aa22.57■■□□□ 1.2
CGREF1-205ENST00000404694 MEGF6O75095 1541 aa22.57■■□□□ 1.2
CGREF1-205ENST00000404694 RGPD3A6NKT7 1758 aaPredicted RBP22.57■■□□□ 1.2
CGREF1-205ENST00000404694 RGPD4Q7Z3J3 1758 aa22.57■■□□□ 1.2
CGREF1-205ENST00000404694 SHANK3Q9BYB0 1731 aa22.56■■□□□ 1.2
CGREF1-205ENST00000404694 PPM1GO15355 546 aaPredicted RBP22.56■■□□□ 1.2
CGREF1-205ENST00000404694 NHSQ6T4R5 1651 aa22.56■■□□□ 1.2
CGREF1-205ENST00000404694 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
CGREF1-205ENST00000404694 USHBP1Q8N6Y0 703 aa22.55■■□□□ 1.2
CGREF1-205ENST00000404694 POLKQ9UBT6 870 aa22.55■■□□□ 1.2
CGREF1-205ENST00000404694 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
CGREF1-205ENST00000404694 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
CGREF1-205ENST00000404694 BCL11BQ9C0K0 894 aaPredicted RBP22.54■■□□□ 1.2
CGREF1-205ENST00000404694 WASHC2AQ641Q2 1341 aa22.54■■□□□ 1.2
CGREF1-205ENST00000404694 PTF1AQ7RTS3 328 aa22.53■■□□□ 1.2
CGREF1-205ENST00000404694 NCAPD2Q15021 1401 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms