RNA–Protein interactions for RNA: ENST00000404319.1

NIP7P3-201, Transcript of NIP7, nucleolar pre-rRNA processing protein pseudogene 3, humanhuman

BASIC

Gene NIP7P3, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7P3-201ENST00000404319 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
NIP7P3-201ENST00000404319 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
NIP7P3-201ENST00000404319 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
NIP7P3-201ENST00000404319 MARCH10Q8NA82 808 aaPredicted RBP12.74□□□□□ -0.37
NIP7P3-201ENST00000404319 ARHGEF28Q8N1W1 1705 aaKnown RBP12.74□□□□□ -0.37
NIP7P3-201ENST00000404319 BCL9O00512 1426 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 PROM2Q8N271 834 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
NIP7P3-201ENST00000404319 PTGER2P43116 358 aa12.72□□□□□ -0.37
NIP7P3-201ENST00000404319 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
NIP7P3-201ENST00000404319 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
NIP7P3-201ENST00000404319 EVC2Q86UK5 1308 aa12.71□□□□□ -0.37
NIP7P3-201ENST00000404319 ARXQ96QS3 562 aa12.71□□□□□ -0.37
NIP7P3-201ENST00000404319 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
NIP7P3-201ENST00000404319 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
NIP7P3-201ENST00000404319 SENP3-EIF4A1A0A087X0R7 540 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 C1QTNF8P60827 252 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 GPR162Q16538 588 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 NBPF1Q3BBV0 1214 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 PDGFDQ9GZP0 370 aaPredicted RBP12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 TOPAZ1Q8N9V7 1692 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 USP6P35125 1406 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
NIP7P3-201ENST00000404319 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
NIP7P3-201ENST00000404319 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
NIP7P3-201ENST00000404319 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
NIP7P3-201ENST00000404319 TTC21AQ8NDW8 1320 aa12.67□□□□□ -0.38
NIP7P3-201ENST00000404319 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
NIP7P3-201ENST00000404319 POLD1P28340 1107 aa12.66□□□□□ -0.38
NIP7P3-201ENST00000404319 TTC21BQ7Z4L5 1316 aa12.65□□□□□ -0.38
NIP7P3-201ENST00000404319 SOX12O15370 315 aa12.65□□□□□ -0.38
NIP7P3-201ENST00000404319 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
NIP7P3-201ENST00000404319 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
NIP7P3-201ENST00000404319 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
NIP7P3-201ENST00000404319 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
NIP7P3-201ENST00000404319 CHD4Q14839 1912 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 CPSF1Q10570 1443 aaKnown RBP12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 UTRNP46939 3433 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 SLIT3O75094 1523 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 LRRC37A3O60309 1634 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 IL2RBP14784 551 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
NIP7P3-201ENST00000404319 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
NIP7P3-201ENST00000404319 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
NIP7P3-201ENST00000404319 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
NIP7P3-201ENST00000404319 KTN1Q86UP2 1357 aaKnown RBP12.61□□□□□ -0.39
NIP7P3-201ENST00000404319 GRIN3BO60391 1043 aa12.61□□□□□ -0.39
NIP7P3-201ENST00000404319 COL18A1P39060 1754 aa12.61□□□□□ -0.39
NIP7P3-201ENST00000404319 MYOM1P52179 1685 aa12.61□□□□□ -0.39
NIP7P3-201ENST00000404319 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
NIP7P3-201ENST00000404319 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
NIP7P3-201ENST00000404319 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
NIP7P3-201ENST00000404319 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
NIP7P3-201ENST00000404319 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
NIP7P3-201ENST00000404319 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.39
NIP7P3-201ENST00000404319 QRICH2Q9H0J4 1663 aa12.58□□□□□ -0.4
NIP7P3-201ENST00000404319 TNS2Q63HR2 1409 aa12.58□□□□□ -0.4
NIP7P3-201ENST00000404319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
NIP7P3-201ENST00000404319 ERBB3P21860 1342 aa12.58□□□□□ -0.4
NIP7P3-201ENST00000404319 ABCC6O95255 1503 aa12.57□□□□□ -0.4
NIP7P3-201ENST00000404319 HDGFL2Q7Z4V5 671 aaPredicted RBP12.57□□□□□ -0.4
NIP7P3-201ENST00000404319 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
NIP7P3-201ENST00000404319 ANKRD24Q8TF21 1146 aa12.57□□□□□ -0.4
NIP7P3-201ENST00000404319 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
NIP7P3-201ENST00000404319 L3MBTL2Q969R5 705 aa12.56□□□□□ -0.4
NIP7P3-201ENST00000404319 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
NIP7P3-201ENST00000404319 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
NIP7P3-201ENST00000404319 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
NIP7P3-201ENST00000404319 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
NIP7P3-201ENST00000404319 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
NIP7P3-201ENST00000404319 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
NIP7P3-201ENST00000404319 LRRC4BQ9NT99 713 aa12.55□□□□□ -0.4
NIP7P3-201ENST00000404319 TERF2IPQ9NYB0 399 aa12.55□□□□□ -0.4
NIP7P3-201ENST00000404319 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
NIP7P3-201ENST00000404319 NHSQ6T4R5 1651 aa12.54□□□□□ -0.4
NIP7P3-201ENST00000404319 SYTL4Q96C24 671 aaPredicted RBP12.54□□□□□ -0.4
NIP7P3-201ENST00000404319 ROCK2O75116 1388 aaKnown RBP12.54□□□□□ -0.4
NIP7P3-201ENST00000404319 NFAT5O94916 1531 aa12.52□□□□□ -0.4
NIP7P3-201ENST00000404319 SLC24A1O60721 1099 aa12.52□□□□□ -0.41
NIP7P3-201ENST00000404319 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.41
NIP7P3-201ENST00000404319 FLAD1Q8NFF5 587 aa12.52□□□□□ -0.41
NIP7P3-201ENST00000404319 IP6K1Q92551 441 aa12.52□□□□□ -0.41
NIP7P3-201ENST00000404319 NME9Q86XW9 330 aa12.51□□□□□ -0.41
NIP7P3-201ENST00000404319 PNPLA7Q6ZV29 1317 aa12.51□□□□□ -0.41
NIP7P3-201ENST00000404319 CEP350Q5VT06 3117 aa12.5□□□□□ -0.41
NIP7P3-201ENST00000404319 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
NIP7P3-201ENST00000404319 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
NIP7P3-201ENST00000404319 PUS7Q96PZ0 661 aaKnown RBP12.5□□□□□ -0.41
NIP7P3-201ENST00000404319 CCNL1Q9UK58 526 aaPredicted RBP12.5□□□□□ -0.41
NIP7P3-201ENST00000404319 BTAF1O14981 1849 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms