RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RTL1A6NKG5 1358 aa39.88■■■■□ 3.97
USP42-202ENST00000404008 KIF24Q5T7B8 1368 aa39.87■■■■□ 3.97
USP42-202ENST00000404008 SMG6Q86US8 1419 aaKnown RBP39.87■■■■□ 3.97
USP42-202ENST00000404008 POLKQ9UBT6 870 aa39.86■■■■□ 3.97
USP42-202ENST00000404008 AXIN2Q9Y2T1 843 aa39.86■■■■□ 3.97
USP42-202ENST00000404008 EMILIN1Q9Y6C2 1016 aa39.86■■■■□ 3.97
USP42-202ENST00000404008 PARD3Q8TEW0 1356 aa39.86■■■■□ 3.97
USP42-202ENST00000404008 USP21Q9UK80 565 aa39.85■■■■□ 3.97
USP42-202ENST00000404008 AMPHP49418 695 aa39.84■■■■□ 3.97
USP42-202ENST00000404008 COL5A2P05997 1499 aaPredicted RBP39.84■■■■□ 3.97
USP42-202ENST00000404008 IP6K1Q92551 441 aa39.84■■■■□ 3.97
USP42-202ENST00000404008 PHF23Q9BUL5 403 aaPredicted RBP39.84■■■■□ 3.97
USP42-202ENST00000404008 BLMP54132 1417 aaPredicted RBP39.83■■■■□ 3.97
USP42-202ENST00000404008 UNC5CLQ8IV45 518 aa39.83■■■■□ 3.97
USP42-202ENST00000404008 FLT4P35916 1363 aa39.82■■■■□ 3.96
USP42-202ENST00000404008 HOXC9P31274 260 aa39.82■■■■□ 3.96
USP42-202ENST00000404008 RGS17Q9UGC6 210 aaPredicted RBP39.8■■■■□ 3.96
USP42-202ENST00000404008 ZNF772Q68DY9 489 aaPredicted RBP39.79■■■■□ 3.96
USP42-202ENST00000404008 PPM1GO15355 546 aaPredicted RBP39.77■■■■□ 3.96
USP42-202ENST00000404008 CDK12Q9NYV4 1490 aaPredicted RBP39.76■■■■□ 3.96
USP42-202ENST00000404008 ATRNO75882 1429 aa39.75■■■■□ 3.95
USP42-202ENST00000404008 FAM208AQ9UK61 1670 aaKnown RBP39.75■■■■□ 3.95
USP42-202ENST00000404008 RALBP1Q15311 655 aa39.74■■■■□ 3.95
USP42-202ENST00000404008 STRN4Q9NRL3 753 aa39.74■■■■□ 3.95
USP42-202ENST00000404008 INSRP06213 1382 aa39.74■■■■□ 3.95
USP42-202ENST00000404008 EVA1CP58658 441 aa39.73■■■■□ 3.95
USP42-202ENST00000404008 HSP90AB2PQ58FF8 381 aa39.73■■■■□ 3.95
USP42-202ENST00000404008 ERBB3P21860 1342 aa39.72■■■■□ 3.95
USP42-202ENST00000404008 PPP2R1AP30153 589 aa39.72■■■■□ 3.95
USP42-202ENST00000404008 MTHFSP49914 203 aa39.72■■■■□ 3.95
USP42-202ENST00000404008 TRPC5Q9UL62 973 aaPredicted RBP39.71■■■■□ 3.95
USP42-202ENST00000404008 WDR17Q8IZU2 1322 aa39.7■■■■□ 3.95
USP42-202ENST00000404008 VPS72Q15906 364 aa39.7■■■■□ 3.95
USP42-202ENST00000404008 ANKRD24Q8TF21 1146 aa39.7■■■■□ 3.95
USP42-202ENST00000404008 PRKRIP1Q9H875 184 aaPredicted RBP39.7■■■■□ 3.95
USP42-202ENST00000404008 LARP1Q6PKG0 1096 aaKnown RBP39.69■■■■□ 3.94
USP42-202ENST00000404008 QTRT2Q9H974 415 aaKnown RBP39.68■■■■□ 3.94
USP42-202ENST00000404008 RGPD2P0DJD1 1756 aa39.68■■■■□ 3.94
USP42-202ENST00000404008 CRB1P82279 1406 aa39.67■■■■□ 3.94
USP42-202ENST00000404008 LTV1Q96GA3 475 aaPredicted RBP39.65■■■■□ 3.94
USP42-202ENST00000404008 GLI3P10071 1580 aa39.64■■■■□ 3.94
USP42-202ENST00000404008 CSB-PGBD3P0DP91 1061 aa39.63■■■■□ 3.93
USP42-202ENST00000404008 POTEAQ6S8J7 498 aa39.62■■■■□ 3.93
USP42-202ENST00000404008 SPATA31A5Q5VU36 1347 aa39.62■■■■□ 3.93
USP42-202ENST00000404008 SPATA31A7Q8IWB4 1347 aa39.62■■■■□ 3.93
USP42-202ENST00000404008 MYBBP1AQ9BQG0 1328 aaKnown RBP39.61■■■■□ 3.93
USP42-202ENST00000404008 COL3A1P02461 1466 aaPredicted RBP39.6■■■■□ 3.93
USP42-202ENST00000404008 TOM1L2Q6ZVM7 507 aa39.6■■■■□ 3.93
USP42-202ENST00000404008 CCDC9Q9Y3X0 531 aaKnown RBP39.6■■■■□ 3.93
USP42-202ENST00000404008 GJD4Q96KN9 370 aaPredicted RBP39.59■■■■□ 3.93
USP42-202ENST00000404008 SPATA31A1Q5TZJ5 1347 aa39.59■■■■□ 3.93
USP42-202ENST00000404008 WNK3Q9BYP7 1800 aa39.57■■■■□ 3.92
USP42-202ENST00000404008 ANP32CO43423 234 aa39.57■■■■□ 3.92
USP42-202ENST00000404008 EIF4A2Q14240 407 aaKnown RBP39.57■■■■□ 3.92
USP42-202ENST00000404008 CARD10Q9BWT7 1032 aa39.56■■■■□ 3.92
USP42-202ENST00000404008 NLRP2Q9NX02 1062 aa39.55■■■■□ 3.92
USP42-202ENST00000404008 RBM6P78332 1123 aaKnown RBP39.54■■■■□ 3.92
USP42-202ENST00000404008 RGPD1P0DJD0 1748 aa39.53■■■■□ 3.92
USP42-202ENST00000404008 USP35Q9P2H5 1018 aa39.53■■■■□ 3.92
USP42-202ENST00000404008 CFAP53Q96M91 514 aa39.51■■■■□ 3.92
USP42-202ENST00000404008 RXRBP28702 533 aa39.5■■■■□ 3.91
USP42-202ENST00000404008 NBPF6Q5VWK0 638 aa39.5■■■■□ 3.91
USP42-202ENST00000404008 NBPF4Q96M43 638 aa39.5■■■■□ 3.91
USP42-202ENST00000404008 IL13P35225 146 aa39.49■■■■□ 3.91
USP42-202ENST00000404008 TCP11L2Q8N4U5 519 aa39.49■■■■□ 3.91
USP42-202ENST00000404008 THRAP3Q9Y2W1 955 aaKnown RBP39.48■■■■□ 3.91
USP42-202ENST00000404008 DIAPH1O60610 1272 aaKnown RBP39.47■■■■□ 3.91
USP42-202ENST00000404008 NCAPD2Q15021 1401 aa39.47■■■■□ 3.91
USP42-202ENST00000404008 THSD7AQ9UPZ6 1657 aa39.46■■■■□ 3.91
USP42-202ENST00000404008 DIEXFQ68CQ4 756 aaKnown RBP39.46■■■■□ 3.91
USP42-202ENST00000404008 EYA1Q99502 592 aa39.46■■■■□ 3.91
USP42-202ENST00000404008 BARGINQ6ZT62 677 aa39.45■■■■□ 3.91
USP42-202ENST00000404008 FAM98CQ17RN3 349 aaKnown RBP39.44■■■■□ 3.9
USP42-202ENST00000404008 IGSF1Q8N6C5 1336 aa39.43■■■■□ 3.9
USP42-202ENST00000404008 ONECUT3O60422 494 aaPredicted RBP39.42■■■■□ 3.9
USP42-202ENST00000404008 USHBP1Q8N6Y0 703 aa39.42■■■■□ 3.9
USP42-202ENST00000404008 PARP4Q9UKK3 1724 aaKnown RBP39.42■■■■□ 3.9
USP42-202ENST00000404008 DISP2A7MBM2 1401 aa39.41■■■■□ 3.9
USP42-202ENST00000404008 RGS12O14924 1447 aa39.38■■■■□ 3.89
USP42-202ENST00000404008 LRRC37A3O60309 1634 aa39.36■■■■□ 3.89
USP42-202ENST00000404008 BRWD3Q6RI45 1802 aa39.35■■■■□ 3.89
USP42-202ENST00000404008 CDCA7Q9BWT1 371 aaPredicted RBP39.33■■■■□ 3.89
USP42-202ENST00000404008 MEGF6O75095 1541 aa39.33■■■■□ 3.89
USP42-202ENST00000404008 IL2RBP14784 551 aa39.33■■■■□ 3.89
USP42-202ENST00000404008 KDRP35968 1356 aa39.32■■■■□ 3.89
USP42-202ENST00000404008 NUDCQ9Y266 331 aa39.32■■■■□ 3.88
USP42-202ENST00000404008 U2SURPO15042 1029 aaKnown RBP39.31■■■■□ 3.88
USP42-202ENST00000404008 SEPT12Q8IYM1 358 aa39.31■■■■□ 3.88
USP42-202ENST00000404008 A0A0G2JS52 829 aa39.29■■■■□ 3.88
USP42-202ENST00000404008 MYT1Q01538 1121 aa39.29■■■■□ 3.88
USP42-202ENST00000404008 SULT6B1Q6IMI4 303 aa39.29■■■■□ 3.88
USP42-202ENST00000404008 AEBP1Q8IUX7 1158 aa39.29■■■■□ 3.88
USP42-202ENST00000404008 RAPGEF4Q8WZA2 1011 aa39.27■■■■□ 3.88
USP42-202ENST00000404008 OVOS2A0A0G2JMS6 1433 aa39.27■■■■□ 3.88
USP42-202ENST00000404008 CCDC184Q52MB2 194 aa39.26■■■■□ 3.88
USP42-202ENST00000404008 PKD1L3Q7Z443 1732 aa39.26■■■■□ 3.88
USP42-202ENST00000404008 SHANK3Q9BYB0 1731 aa39.25■■■■□ 3.87
USP42-202ENST00000404008 HMOX1P09601 288 aa39.24■■■■□ 3.87
USP42-202ENST00000404008 TNS2Q63HR2 1409 aa39.23■■■■□ 3.87
USP42-202ENST00000404008 TATP17735 454 aaPredicted RBP39.23■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms