RNA–Protein interactions for RNA: ENST00000403714.7

EFR3B-204, Transcript of EFR3 homolog B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EFR3B, Length 7,434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-204ENST00000403714 RFX1P22670 979 aa12.88□□□□□ -0.35
EFR3B-204ENST00000403714 GJA3Q9Y6H8 435 aa12.87□□□□□ -0.35
EFR3B-204ENST00000403714 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
EFR3B-204ENST00000403714 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
EFR3B-204ENST00000403714 MKNK2Q9HBH9 465 aa12.87□□□□□ -0.35
EFR3B-204ENST00000403714 NEFHP12036 1026 aa12.87□□□□□ -0.35
EFR3B-204ENST00000403714 GOLGA6L3A6NEY3 463 aa12.87□□□□□ -0.35
EFR3B-204ENST00000403714 TXLNAP40222 546 aa12.87□□□□□ -0.35
EFR3B-204ENST00000403714 SASS6Q6UVJ0 657 aa12.86□□□□□ -0.35
EFR3B-204ENST00000403714 CAVIN4Q5BKX8 364 aa12.86□□□□□ -0.35
EFR3B-204ENST00000403714 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
EFR3B-204ENST00000403714 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
EFR3B-204ENST00000403714 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
EFR3B-204ENST00000403714 PANK1Q8TE04 598 aa12.86□□□□□ -0.35
EFR3B-204ENST00000403714 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
EFR3B-204ENST00000403714 NINLQ9Y2I6 1382 aa12.85□□□□□ -0.35
EFR3B-204ENST00000403714 MAGEC2Q9UBF1 373 aaPredicted RBP12.85□□□□□ -0.35
EFR3B-204ENST00000403714 PLS1Q14651 629 aa12.85□□□□□ -0.35
EFR3B-204ENST00000403714 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
EFR3B-204ENST00000403714 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
EFR3B-204ENST00000403714 SDF4Q9BRK5 362 aa12.85□□□□□ -0.35
EFR3B-204ENST00000403714 TRMT112Q9UI30 125 aaKnown RBP12.85□□□□□ -0.35
EFR3B-204ENST00000403714 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
EFR3B-204ENST00000403714 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
EFR3B-204ENST00000403714 GPR162Q16538 588 aa12.84□□□□□ -0.35
EFR3B-204ENST00000403714 UBAC1Q9BSL1 405 aa12.84□□□□□ -0.35
EFR3B-204ENST00000403714 CCER2I3L3R5 266 aa12.83□□□□□ -0.35
EFR3B-204ENST00000403714 CEP126Q9P2H0 1117 aa12.83□□□□□ -0.35
EFR3B-204ENST00000403714 MYO1BO43795 1136 aa12.83□□□□□ -0.36
EFR3B-204ENST00000403714 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
EFR3B-204ENST00000403714 INTS3Q68E01 1043 aaKnown RBP12.83□□□□□ -0.36
EFR3B-204ENST00000403714 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
EFR3B-204ENST00000403714 ST5P78524 1137 aa12.83□□□□□ -0.36
EFR3B-204ENST00000403714 TSR2Q969E8 191 aaKnown RBP12.83□□□□□ -0.36
EFR3B-204ENST00000403714 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
EFR3B-204ENST00000403714 TWISTNBQ3B726 338 aaPredicted RBP12.82□□□□□ -0.36
EFR3B-204ENST00000403714 AACSQ86V21 672 aa12.82□□□□□ -0.36
EFR3B-204ENST00000403714 MYD88Q99836 296 aa12.82□□□□□ -0.36
EFR3B-204ENST00000403714 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
EFR3B-204ENST00000403714 RDXP35241 583 aaKnown RBP12.82□□□□□ -0.36
EFR3B-204ENST00000403714 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
EFR3B-204ENST00000403714 CCDC173Q0VFZ6 552 aa12.82□□□□□ -0.36
EFR3B-204ENST00000403714 VAT1LQ9HCJ6 419 aa12.81□□□□□ -0.36
EFR3B-204ENST00000403714 CCDC82Q8N4S0 544 aa12.81□□□□□ -0.36
EFR3B-204ENST00000403714 TRIM21P19474 475 aaKnown RBP12.81□□□□□ -0.36
EFR3B-204ENST00000403714 TNIP1Q15025 636 aa12.81□□□□□ -0.36
EFR3B-204ENST00000403714 ZBTB3Q9H5J0 574 aa12.81□□□□□ -0.36
EFR3B-204ENST00000403714 RUFY1Q96T51 708 aa12.8□□□□□ -0.36
EFR3B-204ENST00000403714 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
EFR3B-204ENST00000403714 AIDAQ96BJ3 306 aa12.8□□□□□ -0.36
EFR3B-204ENST00000403714 PSMA5P28066 241 aa12.8□□□□□ -0.36
EFR3B-204ENST00000403714 DHX37Q8IY37 1157 aaKnown RBP12.8□□□□□ -0.36
EFR3B-204ENST00000403714 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
EFR3B-204ENST00000403714 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
EFR3B-204ENST00000403714 LMTK3Q96Q04 1460 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
EFR3B-204ENST00000403714 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
EFR3B-204ENST00000403714 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
EFR3B-204ENST00000403714 GNAI2P04899 355 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 TRIM22Q8IYM9 498 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 GNAI3P08754 354 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 CCDC181Q5TID7 509 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
EFR3B-204ENST00000403714 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
EFR3B-204ENST00000403714 SEC63Q9UGP8 760 aaKnown RBP12.79□□□□□ -0.36
EFR3B-204ENST00000403714 BCAR3O75815 825 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 NBPF6Q5VWK0 638 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
EFR3B-204ENST00000403714 NBPF4Q96M43 638 aa12.79□□□□□ -0.36
EFR3B-204ENST00000403714 PRKG1Q13976 671 aa12.78□□□□□ -0.36
EFR3B-204ENST00000403714 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
EFR3B-204ENST00000403714 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
EFR3B-204ENST00000403714 SAMM50Q9Y512 469 aa12.78□□□□□ -0.36
EFR3B-204ENST00000403714 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
EFR3B-204ENST00000403714 RANBP6O60518 1105 aaKnown RBP12.78□□□□□ -0.36
EFR3B-204ENST00000403714 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
EFR3B-204ENST00000403714 ZNF444Q8N0Y2 327 aaPredicted RBP12.78□□□□□ -0.36
EFR3B-204ENST00000403714 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
EFR3B-204ENST00000403714 NF2P35240 595 aa12.78□□□□□ -0.36
EFR3B-204ENST00000403714 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
EFR3B-204ENST00000403714 ATP6V1AP38606 617 aa12.77□□□□□ -0.36
EFR3B-204ENST00000403714 HMGB2P26583 209 aaKnown RBP12.77□□□□□ -0.36
EFR3B-204ENST00000403714 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.36
EFR3B-204ENST00000403714 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
EFR3B-204ENST00000403714 SMC2O95347 1197 aa12.77□□□□□ -0.37
EFR3B-204ENST00000403714 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
EFR3B-204ENST00000403714 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
EFR3B-204ENST00000403714 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 SRGAP3O43295 1099 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 ZNF354CQ86Y25 554 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 MCM10Q7L590 875 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 STK38Q15208 465 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 CUL5Q93034 780 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 PHF8Q9UPP1 1060 aa12.76□□□□□ -0.37
EFR3B-204ENST00000403714 DESP17661 470 aa12.75□□□□□ -0.37
EFR3B-204ENST00000403714 PICALMQ13492 652 aa12.75□□□□□ -0.37
EFR3B-204ENST00000403714 TCP11L2Q8N4U5 519 aa12.75□□□□□ -0.37
EFR3B-204ENST00000403714 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms