RNA–Protein interactions for RNA: ENST00000402643.2

GAPDHP72-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 72, humanhuman

BASIC

Gene GAPDHP72, Length 1,010 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP72-201ENST00000402643 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
GAPDHP72-201ENST00000402643 SOX12O15370 315 aa12.56□□□□□ -0.4
GAPDHP72-201ENST00000402643 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
GAPDHP72-201ENST00000402643 IP6K1Q92551 441 aa12.56□□□□□ -0.4
GAPDHP72-201ENST00000402643 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
GAPDHP72-201ENST00000402643 LMO7Q8WWI1 1683 aa12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 PPM1GO15355 546 aaPredicted RBP12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 HNRNPUQ00839 825 aaKnown RBP eCLIP12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 NUDCQ9Y266 331 aa12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 RGPD5Q99666 1765 aa12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 ZBED9Q6R2W3 1325 aa12.55□□□□□ -0.4
GAPDHP72-201ENST00000402643 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
GAPDHP72-201ENST00000402643 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
GAPDHP72-201ENST00000402643 PLEKHF1Q96S99 279 aa12.54□□□□□ -0.4
GAPDHP72-201ENST00000402643 KDRP35968 1356 aa12.54□□□□□ -0.4
GAPDHP72-201ENST00000402643 AMPHP49418 695 aa12.53□□□□□ -0.4
GAPDHP72-201ENST00000402643 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
GAPDHP72-201ENST00000402643 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
GAPDHP72-201ENST00000402643 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
GAPDHP72-201ENST00000402643 FCHSD2O94868 740 aa12.52□□□□□ -0.41
GAPDHP72-201ENST00000402643 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.41
GAPDHP72-201ENST00000402643 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.41
GAPDHP72-201ENST00000402643 NCBP3Q53F19 620 aaKnown RBP12.52□□□□□ -0.41
GAPDHP72-201ENST00000402643 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
GAPDHP72-201ENST00000402643 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
GAPDHP72-201ENST00000402643 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
GAPDHP72-201ENST00000402643 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
GAPDHP72-201ENST00000402643 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
GAPDHP72-201ENST00000402643 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
GAPDHP72-201ENST00000402643 PIP4K2BP78356 416 aa12.5□□□□□ -0.41
GAPDHP72-201ENST00000402643 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
GAPDHP72-201ENST00000402643 AXIN2Q9Y2T1 843 aa12.5□□□□□ -0.41
GAPDHP72-201ENST00000402643 ZC3H6P61129 1189 aaKnown RBP12.49□□□□□ -0.41
GAPDHP72-201ENST00000402643 AEBP1Q8IUX7 1158 aa12.49□□□□□ -0.41
GAPDHP72-201ENST00000402643 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
GAPDHP72-201ENST00000402643 EYA1Q99502 592 aa12.49□□□□□ -0.41
GAPDHP72-201ENST00000402643 ERBB3P21860 1342 aa12.48□□□□□ -0.41
GAPDHP72-201ENST00000402643 APAF1O14727 1248 aa12.48□□□□□ -0.41
GAPDHP72-201ENST00000402643 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
GAPDHP72-201ENST00000402643 PRKAR2BP31323 418 aa12.47□□□□□ -0.41
GAPDHP72-201ENST00000402643 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
GAPDHP72-201ENST00000402643 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
GAPDHP72-201ENST00000402643 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 HMOX1P09601 288 aa12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 SULT6B1Q6IMI4 303 aa12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 PHACTR3Q96KR7 559 aa12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 NBPF4Q96M43 638 aa12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.41
GAPDHP72-201ENST00000402643 JCADQ9P266 1359 aa12.45□□□□□ -0.42
GAPDHP72-201ENST00000402643 CHRNA2Q15822 529 aa12.45□□□□□ -0.42
GAPDHP72-201ENST00000402643 ANKRD24Q8TF21 1146 aa12.45□□□□□ -0.42
GAPDHP72-201ENST00000402643 SENP3-EIF4A1A0A087X0R7 540 aa12.44□□□□□ -0.42
GAPDHP72-201ENST00000402643 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
GAPDHP72-201ENST00000402643 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
GAPDHP72-201ENST00000402643 TMPOP42166 694 aaKnown RBP12.44□□□□□ -0.42
GAPDHP72-201ENST00000402643 PRDM11Q9NQV5 511 aa12.44□□□□□ -0.42
GAPDHP72-201ENST00000402643 NRAPQ86VF7 1730 aa12.44□□□□□ -0.42
GAPDHP72-201ENST00000402643 PLCH1Q4KWH8 1693 aa12.44□□□□□ -0.42
GAPDHP72-201ENST00000402643 PLEKHG2Q9H7P9 1386 aa12.43□□□□□ -0.42
GAPDHP72-201ENST00000402643 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
GAPDHP72-201ENST00000402643 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
GAPDHP72-201ENST00000402643 LTV1Q96GA3 475 aaPredicted RBP12.43□□□□□ -0.42
GAPDHP72-201ENST00000402643 NWD2Q9ULI1 1742 aa12.42□□□□□ -0.42
GAPDHP72-201ENST00000402643 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
GAPDHP72-201ENST00000402643 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
GAPDHP72-201ENST00000402643 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
GAPDHP72-201ENST00000402643 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
GAPDHP72-201ENST00000402643 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
GAPDHP72-201ENST00000402643 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
GAPDHP72-201ENST00000402643 SLIT2O94813 1529 aa12.41□□□□□ -0.42
GAPDHP72-201ENST00000402643 LRP6O75581 1613 aa12.4□□□□□ -0.42
GAPDHP72-201ENST00000402643 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.42
GAPDHP72-201ENST00000402643 HSPA1LP34931 641 aa12.4□□□□□ -0.42
GAPDHP72-201ENST00000402643 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
GAPDHP72-201ENST00000402643 TRMT2AQ8IZ69 625 aaKnown RBP12.4□□□□□ -0.42
GAPDHP72-201ENST00000402643 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
GAPDHP72-201ENST00000402643 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
GAPDHP72-201ENST00000402643 MEGF6O75095 1541 aa12.39□□□□□ -0.43
GAPDHP72-201ENST00000402643 CDCA7LQ96GN5 454 aa12.39□□□□□ -0.43
GAPDHP72-201ENST00000402643 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
GAPDHP72-201ENST00000402643 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
GAPDHP72-201ENST00000402643 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
GAPDHP72-201ENST00000402643 RIPK4P57078 832 aa12.38□□□□□ -0.43
GAPDHP72-201ENST00000402643 SLFN5Q08AF3 891 aa12.38□□□□□ -0.43
GAPDHP72-201ENST00000402643 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
GAPDHP72-201ENST00000402643 WDR63Q8IWG1 891 aa12.38□□□□□ -0.43
GAPDHP72-201ENST00000402643 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
GAPDHP72-201ENST00000402643 CRB1P82279 1406 aa12.37□□□□□ -0.43
GAPDHP72-201ENST00000402643 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
GAPDHP72-201ENST00000402643 WNK3Q9BYP7 1800 aa12.37□□□□□ -0.43
GAPDHP72-201ENST00000402643 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
GAPDHP72-201ENST00000402643 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
GAPDHP72-201ENST00000402643 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
GAPDHP72-201ENST00000402643 IL16Q14005 1332 aa12.37□□□□□ -0.43
GAPDHP72-201ENST00000402643 NEFMP07197 916 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms