RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 TRPC5Q9UL62 973 aaPredicted RBP23.72■■□□□ 1.39
HDAC11-202ENST00000402259 BLMP54132 1417 aaPredicted RBP23.72■■□□□ 1.39
HDAC11-202ENST00000402259 COL5A2P05997 1499 aaPredicted RBP23.72■■□□□ 1.39
HDAC11-202ENST00000402259 RGPD5Q99666 1765 aa23.72■■□□□ 1.39
HDAC11-202ENST00000402259 ZBTB7CA1YPR0 619 aa23.7■■□□□ 1.38
HDAC11-202ENST00000402259 VPS72Q15906 364 aa23.7■■□□□ 1.38
HDAC11-202ENST00000402259 IP6K1Q92551 441 aa23.7■■□□□ 1.38
HDAC11-202ENST00000402259 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
HDAC11-202ENST00000402259 CC2D1BQ5T0F9 858 aaKnown RBP23.69■■□□□ 1.38
HDAC11-202ENST00000402259 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
HDAC11-202ENST00000402259 FBLN1P23142 703 aa23.68■■□□□ 1.38
HDAC11-202ENST00000402259 RRS1Q15050 365 aaKnown RBP23.68■■□□□ 1.38
HDAC11-202ENST00000402259 QTRT2Q9H974 415 aaKnown RBP23.68■■□□□ 1.38
HDAC11-202ENST00000402259 AXIN2Q9Y2T1 843 aa23.68■■□□□ 1.38
HDAC11-202ENST00000402259 FLT4P35916 1363 aa23.67■■□□□ 1.38
HDAC11-202ENST00000402259 AMPHP49418 695 aa23.67■■□□□ 1.38
HDAC11-202ENST00000402259 POTEAQ6S8J7 498 aa23.67■■□□□ 1.38
HDAC11-202ENST00000402259 HOXC9P31274 260 aa23.66■■□□□ 1.38
HDAC11-202ENST00000402259 POLKQ9UBT6 870 aa23.66■■□□□ 1.38
HDAC11-202ENST00000402259 FAM208AQ9UK61 1670 aaKnown RBP23.65■■□□□ 1.38
HDAC11-202ENST00000402259 EVA1CP58658 441 aa23.65■■□□□ 1.38
HDAC11-202ENST00000402259 INSRP06213 1382 aa23.65■■□□□ 1.38
HDAC11-202ENST00000402259 WDR17Q8IZU2 1322 aa23.64■■□□□ 1.38
HDAC11-202ENST00000402259 TNNT2P45379 298 aaPredicted RBP23.64■■□□□ 1.37
HDAC11-202ENST00000402259 RBM6P78332 1123 aaKnown RBP23.64■■□□□ 1.37
HDAC11-202ENST00000402259 EMILIN1Q9Y6C2 1016 aa23.64■■□□□ 1.37
HDAC11-202ENST00000402259 ERBB3P21860 1342 aa23.63■■□□□ 1.37
HDAC11-202ENST00000402259 CRB1P82279 1406 aa23.63■■□□□ 1.37
HDAC11-202ENST00000402259 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
HDAC11-202ENST00000402259 STRN4Q9NRL3 753 aa23.63■■□□□ 1.37
HDAC11-202ENST00000402259 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
HDAC11-202ENST00000402259 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
HDAC11-202ENST00000402259 GLI3P10071 1580 aa23.62■■□□□ 1.37
HDAC11-202ENST00000402259 CDK12Q9NYV4 1490 aaPredicted RBP23.62■■□□□ 1.37
HDAC11-202ENST00000402259 RXRBP28702 533 aa23.61■■□□□ 1.37
HDAC11-202ENST00000402259 PARD3Q8TEW0 1356 aa23.61■■□□□ 1.37
HDAC11-202ENST00000402259 LARP1Q6PKG0 1096 aaKnown RBP23.6■■□□□ 1.37
HDAC11-202ENST00000402259 ANKRD24Q8TF21 1146 aa23.6■■□□□ 1.37
HDAC11-202ENST00000402259 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
HDAC11-202ENST00000402259 HSP90AB2PQ58FF8 381 aa23.58■■□□□ 1.37
HDAC11-202ENST00000402259 CCDC9Q9Y3X0 531 aaKnown RBP23.58■■□□□ 1.37
HDAC11-202ENST00000402259 CSB-PGBD3P0DP91 1061 aa23.57■■□□□ 1.36
HDAC11-202ENST00000402259 TOM1L2Q6ZVM7 507 aa23.57■■□□□ 1.36
HDAC11-202ENST00000402259 CARD10Q9BWT7 1032 aa23.57■■□□□ 1.36
HDAC11-202ENST00000402259 THRAP3Q9Y2W1 955 aaKnown RBP23.57■■□□□ 1.36
HDAC11-202ENST00000402259 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
HDAC11-202ENST00000402259 RALBP1Q15311 655 aa23.56■■□□□ 1.36
HDAC11-202ENST00000402259 ONECUT3O60422 494 aaPredicted RBP23.55■■□□□ 1.36
HDAC11-202ENST00000402259 MTHFSP49914 203 aa23.54■■□□□ 1.36
HDAC11-202ENST00000402259 CNGB1Q14028 1251 aaPredicted RBP23.54■■□□□ 1.36
HDAC11-202ENST00000402259 BARGINQ6ZT62 677 aa23.54■■□□□ 1.36
HDAC11-202ENST00000402259 TCP11L2Q8N4U5 519 aa23.54■■□□□ 1.36
HDAC11-202ENST00000402259 WNK3Q9BYP7 1800 aa23.54■■□□□ 1.36
HDAC11-202ENST00000402259 THSD7AQ9UPZ6 1657 aa23.53■■□□□ 1.36
HDAC11-202ENST00000402259 PPP2R1AP30153 589 aa23.52■■□□□ 1.36
HDAC11-202ENST00000402259 LTV1Q96GA3 475 aaPredicted RBP23.52■■□□□ 1.36
HDAC11-202ENST00000402259 RGPD2P0DJD1 1756 aa23.52■■□□□ 1.36
HDAC11-202ENST00000402259 NLRP2Q9NX02 1062 aa23.51■■□□□ 1.35
HDAC11-202ENST00000402259 RGS12O14924 1447 aa23.5■■□□□ 1.35
HDAC11-202ENST00000402259 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
HDAC11-202ENST00000402259 CDCA7Q9BWT1 371 aaPredicted RBP23.49■■□□□ 1.35
HDAC11-202ENST00000402259 PARP4Q9UKK3 1724 aaKnown RBP23.48■■□□□ 1.35
HDAC11-202ENST00000402259 EIF4A2Q14240 407 aaKnown RBP23.48■■□□□ 1.35
HDAC11-202ENST00000402259 FAM98CQ17RN3 349 aaKnown RBP23.48■■□□□ 1.35
HDAC11-202ENST00000402259 PRKRIP1Q9H875 184 aaPredicted RBP23.48■■□□□ 1.35
HDAC11-202ENST00000402259 USP35Q9P2H5 1018 aa23.48■■□□□ 1.35
HDAC11-202ENST00000402259 DISP2A7MBM2 1401 aa23.48■■□□□ 1.35
HDAC11-202ENST00000402259 COL3A1P02461 1466 aaPredicted RBP23.48■■□□□ 1.35
HDAC11-202ENST00000402259 RGPD1P0DJD0 1748 aa23.46■■□□□ 1.35
HDAC11-202ENST00000402259 NBPF6Q5VWK0 638 aa23.46■■□□□ 1.35
HDAC11-202ENST00000402259 NBPF4Q96M43 638 aa23.46■■□□□ 1.35
HDAC11-202ENST00000402259 MYBBP1AQ9BQG0 1328 aaKnown RBP23.45■■□□□ 1.34
HDAC11-202ENST00000402259 CFAP53Q96M91 514 aa23.45■■□□□ 1.34
HDAC11-202ENST00000402259 IL13P35225 146 aa23.44■■□□□ 1.34
HDAC11-202ENST00000402259 SEPT12Q8IYM1 358 aa23.44■■□□□ 1.34
HDAC11-202ENST00000402259 BRWD3Q6RI45 1802 aa23.43■■□□□ 1.34
HDAC11-202ENST00000402259 IGSF1Q8N6C5 1336 aa23.43■■□□□ 1.34
HDAC11-202ENST00000402259 EYA1Q99502 592 aa23.43■■□□□ 1.34
HDAC11-202ENST00000402259 DIAPH1O60610 1272 aaKnown RBP23.42■■□□□ 1.34
HDAC11-202ENST00000402259 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
HDAC11-202ENST00000402259 LRRC37A3O60309 1634 aa23.41■■□□□ 1.34
HDAC11-202ENST00000402259 IL2RBP14784 551 aa23.41■■□□□ 1.34
HDAC11-202ENST00000402259 ILDR2Q71H61 639 aa23.4■■□□□ 1.34
HDAC11-202ENST00000402259 A0A0G2JS52 829 aa23.38■■□□□ 1.33
HDAC11-202ENST00000402259 ANP32CO43423 234 aa23.38■■□□□ 1.33
HDAC11-202ENST00000402259 MYT1Q01538 1121 aa23.38■■□□□ 1.33
HDAC11-202ENST00000402259 KDRP35968 1356 aa23.38■■□□□ 1.33
HDAC11-202ENST00000402259 OVOS2A0A0G2JMS6 1433 aa23.37■■□□□ 1.33
HDAC11-202ENST00000402259 TNS2Q63HR2 1409 aa23.37■■□□□ 1.33
HDAC11-202ENST00000402259 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
HDAC11-202ENST00000402259 MEGF6O75095 1541 aa23.37■■□□□ 1.33
HDAC11-202ENST00000402259 DDB1Q16531 1140 aa23.36■■□□□ 1.33
HDAC11-202ENST00000402259 RAPGEF4Q8WZA2 1011 aa23.36■■□□□ 1.33
HDAC11-202ENST00000402259 KRT27Q7Z3Y8 459 aa23.35■■□□□ 1.33
HDAC11-202ENST00000402259 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
HDAC11-202ENST00000402259 TATP17735 454 aaPredicted RBP23.34■■□□□ 1.33
HDAC11-202ENST00000402259 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.33
HDAC11-202ENST00000402259 EXOC5O00471 708 aa23.33■■□□□ 1.33
HDAC11-202ENST00000402259 PDE3BQ13370 1112 aa23.32■■□□□ 1.32
HDAC11-202ENST00000402259 SHANK3Q9BYB0 1731 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms