RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 AMER1Q5JTC6 1135 aaPredicted RBP24.87■■□□□ 1.57
SBF1-203ENST00000399627 ILDR2Q71H61 639 aa24.87■■□□□ 1.57
SBF1-203ENST00000399627 AXIN2Q9Y2T1 843 aa24.87■■□□□ 1.57
SBF1-203ENST00000399627 EVA1CP58658 441 aa24.86■■□□□ 1.57
SBF1-203ENST00000399627 CCDC9Q9Y3X0 531 aaKnown RBP24.86■■□□□ 1.57
SBF1-203ENST00000399627 MAP2P11137 1827 aaKnown RBP24.86■■□□□ 1.57
SBF1-203ENST00000399627 ABCC6O95255 1503 aa24.86■■□□□ 1.57
SBF1-203ENST00000399627 MAP3K19Q56UN5 1328 aa24.86■■□□□ 1.57
SBF1-203ENST00000399627 COL5A2P05997 1499 aaPredicted RBP24.85■■□□□ 1.57
SBF1-203ENST00000399627 RRS1Q15050 365 aaKnown RBP24.85■■□□□ 1.57
SBF1-203ENST00000399627 GJD4Q96KN9 370 aaPredicted RBP24.85■■□□□ 1.57
SBF1-203ENST00000399627 GLI3P10071 1580 aa24.84■■□□□ 1.57
SBF1-203ENST00000399627 MORC1Q86VD1 984 aa24.82■■□□□ 1.56
SBF1-203ENST00000399627 TNNT2P45379 298 aaPredicted RBP24.81■■□□□ 1.56
SBF1-203ENST00000399627 AMPHP49418 695 aa24.81■■□□□ 1.56
SBF1-203ENST00000399627 LARP1Q6PKG0 1096 aaKnown RBP24.81■■□□□ 1.56
SBF1-203ENST00000399627 IP6K1Q92551 441 aa24.81■■□□□ 1.56
SBF1-203ENST00000399627 SPATA31A5Q5VU36 1347 aa24.81■■□□□ 1.56
SBF1-203ENST00000399627 SPATA31A7Q8IWB4 1347 aa24.81■■□□□ 1.56
SBF1-203ENST00000399627 CC2D1BQ5T0F9 858 aaKnown RBP24.8■■□□□ 1.56
SBF1-203ENST00000399627 PEAK1Q9H792 1746 aa24.8■■□□□ 1.56
SBF1-203ENST00000399627 HOXC9P31274 260 aa24.79■■□□□ 1.56
SBF1-203ENST00000399627 NPC1L1Q9UHC9 1359 aa24.79■■□□□ 1.56
SBF1-203ENST00000399627 DDX10Q13206 875 aaKnown RBP24.78■■□□□ 1.56
SBF1-203ENST00000399627 CNGB1Q14028 1251 aaPredicted RBP24.78■■□□□ 1.56
SBF1-203ENST00000399627 EMILIN1Q9Y6C2 1016 aa24.78■■□□□ 1.56
SBF1-203ENST00000399627 RTL1A6NKG5 1358 aa24.78■■□□□ 1.56
SBF1-203ENST00000399627 CDK12Q9NYV4 1490 aaPredicted RBP24.77■■□□□ 1.56
SBF1-203ENST00000399627 SPATA31A1Q5TZJ5 1347 aa24.77■■□□□ 1.56
SBF1-203ENST00000399627 WDR17Q8IZU2 1322 aa24.77■■□□□ 1.56
SBF1-203ENST00000399627 BLMP54132 1417 aaPredicted RBP24.77■■□□□ 1.56
SBF1-203ENST00000399627 ZNF316A6NFI3 1004 aaPredicted RBP24.76■■□□□ 1.55
SBF1-203ENST00000399627 CSB-PGBD3P0DP91 1061 aa24.76■■□□□ 1.55
SBF1-203ENST00000399627 RGS12O14924 1447 aa24.76■■□□□ 1.55
SBF1-203ENST00000399627 TOM1L2Q6ZVM7 507 aa24.75■■□□□ 1.55
SBF1-203ENST00000399627 ANKRD24Q8TF21 1146 aa24.75■■□□□ 1.55
SBF1-203ENST00000399627 USP35Q9P2H5 1018 aa24.75■■□□□ 1.55
SBF1-203ENST00000399627 POLKQ9UBT6 870 aa24.75■■□□□ 1.55
SBF1-203ENST00000399627 ERBB3P21860 1342 aa24.75■■□□□ 1.55
SBF1-203ENST00000399627 CRB1P82279 1406 aa24.75■■□□□ 1.55
SBF1-203ENST00000399627 LTV1Q96GA3 475 aaPredicted RBP24.74■■□□□ 1.55
SBF1-203ENST00000399627 FLT4P35916 1363 aa24.74■■□□□ 1.55
SBF1-203ENST00000399627 KIF24Q5T7B8 1368 aa24.73■■□□□ 1.55
SBF1-203ENST00000399627 PPM1GO15355 546 aaPredicted RBP24.73■■□□□ 1.55
SBF1-203ENST00000399627 FAM98CQ17RN3 349 aaKnown RBP24.72■■□□□ 1.55
SBF1-203ENST00000399627 HSP90AB2PQ58FF8 381 aa24.71■■□□□ 1.55
SBF1-203ENST00000399627 RGPD2P0DJD1 1756 aa24.71■■□□□ 1.55
SBF1-203ENST00000399627 FAM208AQ9UK61 1670 aaKnown RBP24.7■■□□□ 1.54
SBF1-203ENST00000399627 ONECUT3O60422 494 aaPredicted RBP24.7■■□□□ 1.54
SBF1-203ENST00000399627 TCP11L2Q8N4U5 519 aa24.7■■□□□ 1.54
SBF1-203ENST00000399627 BRWD3Q6RI45 1802 aa24.7■■□□□ 1.54
SBF1-203ENST00000399627 INSRP06213 1382 aa24.69■■□□□ 1.54
SBF1-203ENST00000399627 CARD10Q9BWT7 1032 aa24.69■■□□□ 1.54
SBF1-203ENST00000399627 NLRP2Q9NX02 1062 aa24.69■■□□□ 1.54
SBF1-203ENST00000399627 SEPT12Q8IYM1 358 aa24.68■■□□□ 1.54
SBF1-203ENST00000399627 SMG6Q86US8 1419 aaKnown RBP24.68■■□□□ 1.54
SBF1-203ENST00000399627 THSD7AQ9UPZ6 1657 aa24.67■■□□□ 1.54
SBF1-203ENST00000399627 A0A0G2JS52 829 aa24.67■■□□□ 1.54
SBF1-203ENST00000399627 MYT1Q01538 1121 aa24.67■■□□□ 1.54
SBF1-203ENST00000399627 BARGINQ6ZT62 677 aa24.67■■□□□ 1.54
SBF1-203ENST00000399627 THRAP3Q9Y2W1 955 aaKnown RBP24.67■■□□□ 1.54
SBF1-203ENST00000399627 WNK3Q9BYP7 1800 aa24.67■■□□□ 1.54
SBF1-203ENST00000399627 MTHFSP49914 203 aa24.62■■□□□ 1.53
SBF1-203ENST00000399627 PARP4Q9UKK3 1724 aaKnown RBP24.61■■□□□ 1.53
SBF1-203ENST00000399627 NBPF6Q5VWK0 638 aa24.6■■□□□ 1.53
SBF1-203ENST00000399627 NBPF4Q96M43 638 aa24.6■■□□□ 1.53
SBF1-203ENST00000399627 EIF4A2Q14240 407 aaKnown RBP24.59■■□□□ 1.53
SBF1-203ENST00000399627 DISP2A7MBM2 1401 aa24.59■■□□□ 1.53
SBF1-203ENST00000399627 USHBP1Q8N6Y0 703 aa24.58■■□□□ 1.53
SBF1-203ENST00000399627 PARD3Q8TEW0 1356 aa24.57■■□□□ 1.52
SBF1-203ENST00000399627 PPP2R1AP30153 589 aa24.56■■□□□ 1.52
SBF1-203ENST00000399627 KRT27Q7Z3Y8 459 aa24.56■■□□□ 1.52
SBF1-203ENST00000399627 CDCA7Q9BWT1 371 aaPredicted RBP24.56■■□□□ 1.52
SBF1-203ENST00000399627 LRRC37A3O60309 1634 aa24.56■■□□□ 1.52
SBF1-203ENST00000399627 IL2RBP14784 551 aa24.54■■□□□ 1.52
SBF1-203ENST00000399627 EYA1Q99502 592 aa24.54■■□□□ 1.52
SBF1-203ENST00000399627 DDB1Q16531 1140 aa24.52■■□□□ 1.52
SBF1-203ENST00000399627 PDE3BQ13370 1112 aa24.51■■□□□ 1.51
SBF1-203ENST00000399627 NCAPD2Q15021 1401 aa24.51■■□□□ 1.51
SBF1-203ENST00000399627 IL13P35225 146 aa24.5■■□□□ 1.51
SBF1-203ENST00000399627 RALBP1Q15311 655 aa24.5■■□□□ 1.51
SBF1-203ENST00000399627 FAM182BQ5T319 152 aa24.5■■□□□ 1.51
SBF1-203ENST00000399627 COL3A1P02461 1466 aaPredicted RBP24.5■■□□□ 1.51
SBF1-203ENST00000399627 MEGF6O75095 1541 aa24.5■■□□□ 1.51
SBF1-203ENST00000399627 EXOC5O00471 708 aa24.49■■□□□ 1.51
SBF1-203ENST00000399627 SOCS7O14512 581 aa24.49■■□□□ 1.51
SBF1-203ENST00000399627 RGPD1P0DJD0 1748 aa24.48■■□□□ 1.51
SBF1-203ENST00000399627 TNS2Q63HR2 1409 aa24.48■■□□□ 1.51
SBF1-203ENST00000399627 IGSF1Q8N6C5 1336 aa24.48■■□□□ 1.51
SBF1-203ENST00000399627 DIAPH1O60610 1272 aaKnown RBP24.47■■□□□ 1.51
SBF1-203ENST00000399627 RAPGEF4Q8WZA2 1011 aa24.47■■□□□ 1.51
SBF1-203ENST00000399627 CFAP53Q96M91 514 aa24.46■■□□□ 1.51
SBF1-203ENST00000399627 OVOS2A0A0G2JMS6 1433 aa24.45■■□□□ 1.51
SBF1-203ENST00000399627 TATP17735 454 aaPredicted RBP24.45■■□□□ 1.5
SBF1-203ENST00000399627 MARCH10Q8NA82 808 aaPredicted RBP24.44■■□□□ 1.5
SBF1-203ENST00000399627 SHANK3Q9BYB0 1731 aa24.44■■□□□ 1.5
SBF1-203ENST00000399627 PRKRIP1Q9H875 184 aaPredicted RBP24.43■■□□□ 1.5
SBF1-203ENST00000399627 KAT6BQ8WYB5 2073 aa24.42■■□□□ 1.5
SBF1-203ENST00000399627 AEBP1Q8IUX7 1158 aa24.42■■□□□ 1.5
SBF1-203ENST00000399627 ZCRB1Q8TBF4 217 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms