RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 ZFP91Q96JP5 570 aaPredicted RBP13.25□□□□□ -0.29
CACNA1C-206ENST00000399595 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 TOM1O60784 492 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 PDCL2Q8N4E4 241 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
CACNA1C-206ENST00000399595 GTF2A1P52655 376 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 SAFBQ15424 915 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 STAMBPO95630 424 aa13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 ANAPC15P60006 121 aa13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 RNF187Q5TA31 235 aaPredicted RBP13.23□□□□□ -0.29
CACNA1C-206ENST00000399595 CCDC91Q7Z6B0 441 aa13.22□□□□□ -0.29
CACNA1C-206ENST00000399595 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
CACNA1C-206ENST00000399595 CALCOCO1Q9P1Z2 691 aa13.22□□□□□ -0.29
CACNA1C-206ENST00000399595 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
CACNA1C-206ENST00000399595 POLD1P28340 1107 aa13.22□□□□□ -0.29
CACNA1C-206ENST00000399595 TMCO3Q6UWJ1 677 aa13.22□□□□□ -0.29
CACNA1C-206ENST00000399595 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
CACNA1C-206ENST00000399595 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-206ENST00000399595 RALYLQ86SE5 291 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-206ENST00000399595 ZHX1Q9UKY1 873 aaPredicted RBP13.21□□□□□ -0.29
CACNA1C-206ENST00000399595 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
CACNA1C-206ENST00000399595 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
CACNA1C-206ENST00000399595 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
CACNA1C-206ENST00000399595 RFX1P22670 979 aa13.21□□□□□ -0.3
CACNA1C-206ENST00000399595 TIGD1Q96MW7 591 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 LRRFIP2Q9Y608 721 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 SERPINC1P01008 464 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 MRPS9P82933 396 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 PPM1EQ8WY54 764 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 ZNHIT6Q9NWK9 470 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-206ENST00000399595 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-206ENST00000399595 INTS3Q68E01 1043 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-206ENST00000399595 CFAP57Q96MR6 1250 aa13.19□□□□□ -0.3
CACNA1C-206ENST00000399595 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-206ENST00000399595 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
CACNA1C-206ENST00000399595 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
CACNA1C-206ENST00000399595 XBP1P17861 261 aa13.18□□□□□ -0.3
CACNA1C-206ENST00000399595 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
CACNA1C-206ENST00000399595 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-206ENST00000399595 CCDC160A6NGH7 325 aa13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 MICALCLQ6ZW33 695 aa13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 HMOX1P09601 288 aa13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
CACNA1C-206ENST00000399595 KINO60870 393 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 DNA2P51530 1060 aa13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 TNIKQ9UKE5 1360 aa13.16□□□□□ -0.3
CACNA1C-206ENST00000399595 POLR3GO15318 223 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-206ENST00000399595 KIF7Q2M1P5 1343 aa13.15□□□□□ -0.3
CACNA1C-206ENST00000399595 GRPEL1Q9HAV7 217 aa13.15□□□□□ -0.3
CACNA1C-206ENST00000399595 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
CACNA1C-206ENST00000399595 TTC36A6NLP5 189 aa13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 CTNNBL1Q8WYA6 563 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 MBD3O95983 291 aa13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 SETD5Q9C0A6 1442 aa13.14□□□□□ -0.31
CACNA1C-206ENST00000399595 TXLNAP40222 546 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 TERF1P54274 439 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 LUC7LQ9NQ29 371 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 CRACR2AQ9BSW2 395 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 ZNF76P36508 570 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 ZMYND15Q9H091 742 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 RIPK4P57078 832 aa13.13□□□□□ -0.31
CACNA1C-206ENST00000399595 SEPT6Q14141 434 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms