RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 BMP2KLQ5H9B9 411 aa13.36□□□□□ -0.27
ITSN1-207ENST00000399338 CHAMP1Q96JM3 812 aa13.36□□□□□ -0.27
ITSN1-207ENST00000399338 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
ITSN1-207ENST00000399338 CEP83Q9Y592 693 aa13.36□□□□□ -0.27
ITSN1-207ENST00000399338 PKD2Q13563 968 aa13.36□□□□□ -0.27
ITSN1-207ENST00000399338 CFAP74Q9C0B2 1584 aa13.36□□□□□ -0.27
ITSN1-207ENST00000399338 GRIPAP1Q4V328 841 aa13.35□□□□□ -0.27
ITSN1-207ENST00000399338 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
ITSN1-207ENST00000399338 GYS2P54840 703 aa13.35□□□□□ -0.27
ITSN1-207ENST00000399338 SYAP1Q96A49 352 aaPredicted RBP13.35□□□□□ -0.27
ITSN1-207ENST00000399338 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
ITSN1-207ENST00000399338 KDM4AO75164 1064 aa13.34□□□□□ -0.27
ITSN1-207ENST00000399338 CCDC172P0C7W6 258 aa13.34□□□□□ -0.27
ITSN1-207ENST00000399338 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
ITSN1-207ENST00000399338 MAGI2Q86UL8 1455 aa13.34□□□□□ -0.27
ITSN1-207ENST00000399338 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
ITSN1-207ENST00000399338 NUCB1Q02818 461 aa13.34□□□□□ -0.27
ITSN1-207ENST00000399338 RABEP1Q15276 862 aa13.34□□□□□ -0.27
ITSN1-207ENST00000399338 PATL2C9JE40 543 aaKnown RBP13.33□□□□□ -0.27
ITSN1-207ENST00000399338 MYO1CO00159 1063 aa13.33□□□□□ -0.27
ITSN1-207ENST00000399338 PHF14O94880 888 aa13.33□□□□□ -0.27
ITSN1-207ENST00000399338 SYT10Q6XYQ8 523 aa13.33□□□□□ -0.27
ITSN1-207ENST00000399338 PAXBP1Q9Y5B6 917 aa13.33□□□□□ -0.27
ITSN1-207ENST00000399338 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
ITSN1-207ENST00000399338 LAMC1P11047 1609 aa13.33□□□□□ -0.28
ITSN1-207ENST00000399338 TBC1D9Q6ZT07 1266 aa13.33□□□□□ -0.28
ITSN1-207ENST00000399338 TRIM66O15016 1216 aa13.33□□□□□ -0.28
ITSN1-207ENST00000399338 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
ITSN1-207ENST00000399338 ZGPATQ8N5A5 531 aaKnown RBP13.33□□□□□ -0.28
ITSN1-207ENST00000399338 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
ITSN1-207ENST00000399338 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
ITSN1-207ENST00000399338 EGFL6Q8IUX8 553 aa13.32□□□□□ -0.28
ITSN1-207ENST00000399338 TSGA10IPQ3SY00 556 aa13.32□□□□□ -0.28
ITSN1-207ENST00000399338 NESP48681 1621 aa13.31□□□□□ -0.28
ITSN1-207ENST00000399338 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-207ENST00000399338 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
ITSN1-207ENST00000399338 FBXO38Q6PIJ6 1188 aa13.31□□□□□ -0.28
ITSN1-207ENST00000399338 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
ITSN1-207ENST00000399338 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
ITSN1-207ENST00000399338 CEP120Q8N960 986 aa13.31□□□□□ -0.28
ITSN1-207ENST00000399338 LCMT1Q9UIC8 334 aa13.31□□□□□ -0.28
ITSN1-207ENST00000399338 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
ITSN1-207ENST00000399338 WDR7Q9Y4E6 1490 aa13.3□□□□□ -0.28
ITSN1-207ENST00000399338 GOLGA6L6A8MZA4 724 aa13.3□□□□□ -0.28
ITSN1-207ENST00000399338 AP5Z1O43299 807 aa13.3□□□□□ -0.28
ITSN1-207ENST00000399338 TXLNBQ8N3L3 684 aa13.3□□□□□ -0.28
ITSN1-207ENST00000399338 BCL2L13Q9BXK5 485 aa13.3□□□□□ -0.28
ITSN1-207ENST00000399338 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
ITSN1-207ENST00000399338 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
ITSN1-207ENST00000399338 TNNT1P13805 278 aa13.29□□□□□ -0.28
ITSN1-207ENST00000399338 JRKLQ9Y4A0 524 aa13.29□□□□□ -0.28
ITSN1-207ENST00000399338 SYNMO15061 1565 aa13.29□□□□□ -0.28
ITSN1-207ENST00000399338 WDR62O43379 1518 aa13.29□□□□□ -0.28
ITSN1-207ENST00000399338 ITSN2Q9NZM3 1697 aa13.29□□□□□ -0.28
ITSN1-207ENST00000399338 DZIP1LQ8IYY4 767 aaKnown RBP13.28□□□□□ -0.28
ITSN1-207ENST00000399338 NEK11Q8NG66 645 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 C16orf45Q96MC5 204 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-207ENST00000399338 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
ITSN1-207ENST00000399338 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
ITSN1-207ENST00000399338 SATB1Q01826 763 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 BMS1Q14692 1282 aaKnown RBP13.28□□□□□ -0.28
ITSN1-207ENST00000399338 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 HOMEZQ8IX15 550 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 KNSTRNQ9Y448 316 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 HCLS1P14317 486 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-207ENST00000399338 LNPKQ9C0E8 428 aa13.28□□□□□ -0.28
ITSN1-207ENST00000399338 PTPRCP08575 1304 aa13.27□□□□□ -0.28
ITSN1-207ENST00000399338 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.28
ITSN1-207ENST00000399338 FHOD1Q9Y613 1164 aa13.27□□□□□ -0.28
ITSN1-207ENST00000399338 TMED8Q6PL24 325 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-207ENST00000399338 GPATCH11Q8N954 259 aa13.27□□□□□ -0.29
ITSN1-207ENST00000399338 TOMM22Q9NS69 142 aa13.27□□□□□ -0.29
ITSN1-207ENST00000399338 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
ITSN1-207ENST00000399338 TMF1P82094 1093 aa13.26□□□□□ -0.29
ITSN1-207ENST00000399338 ASXL1Q8IXJ9 1541 aa13.26□□□□□ -0.29
ITSN1-207ENST00000399338 ERBB3P21860 1342 aa13.26□□□□□ -0.29
ITSN1-207ENST00000399338 BRD1O95696 1058 aa13.26□□□□□ -0.29
ITSN1-207ENST00000399338 SRLQ86TD4 932 aa13.26□□□□□ -0.29
ITSN1-207ENST00000399338 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
ITSN1-207ENST00000399338 KANK1Q14678 1352 aa13.25□□□□□ -0.29
ITSN1-207ENST00000399338 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
ITSN1-207ENST00000399338 ATP2B1P20020 1258 aa13.25□□□□□ -0.29
ITSN1-207ENST00000399338 GADD45BO75293 160 aaPredicted RBP13.25□□□□□ -0.29
ITSN1-207ENST00000399338 PLA2G4AP47712 749 aa13.25□□□□□ -0.29
ITSN1-207ENST00000399338 GSCP56915 257 aaPredicted RBP13.25□□□□□ -0.29
ITSN1-207ENST00000399338 GTF3C6Q969F1 213 aa13.25□□□□□ -0.29
ITSN1-207ENST00000399338 CCDC183Q5T5S1 534 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 SPC24Q8NBT2 197 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-207ENST00000399338 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 H2AFXP16104 143 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-207ENST00000399338 PTGS1P23219 599 aa13.24□□□□□ -0.29
ITSN1-207ENST00000399338 ELF2Q15723 593 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms