RNA–Protein interactions for RNA: ENST00000399177.7

CCDC178-203, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC178, Length 1,017 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-203ENST00000399177 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
CCDC178-203ENST00000399177 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
CCDC178-203ENST00000399177 PURBQ96QR8 312 aaKnown RBP9.89□□□□□ -0.83
CCDC178-203ENST00000399177 C1QTNF2Q9BXJ5 285 aa9.89□□□□□ -0.83
CCDC178-203ENST00000399177 BMP2P12643 396 aa9.88□□□□□ -0.83
CCDC178-203ENST00000399177 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
CCDC178-203ENST00000399177 NBPF20Q3BBV1 942 aa9.88□□□□□ -0.83
CCDC178-203ENST00000399177 GRM5P41594 1212 aa9.87□□□□□ -0.83
CCDC178-203ENST00000399177 C6orf118Q5T5N4 469 aa9.87□□□□□ -0.83
CCDC178-203ENST00000399177 TRIM46Q7Z4K8 759 aa9.87□□□□□ -0.83
CCDC178-203ENST00000399177 DZIP3Q86Y13 1208 aaKnown RBP9.87□□□□□ -0.83
CCDC178-203ENST00000399177 ITPKCQ96DU7 683 aa9.87□□□□□ -0.83
CCDC178-203ENST00000399177 KCTD15Q96SI1 283 aaPredicted RBP9.86□□□□□ -0.83
CCDC178-203ENST00000399177 ZFAND3Q9H8U3 227 aa9.86□□□□□ -0.83
CCDC178-203ENST00000399177 TERTO14746 1132 aaKnown RBP9.85□□□□□ -0.83
CCDC178-203ENST00000399177 WIPF1O43516 503 aa9.85□□□□□ -0.83
CCDC178-203ENST00000399177 MAN1A2O60476 641 aa9.85□□□□□ -0.83
CCDC178-203ENST00000399177 NR3C2P08235 984 aa9.85□□□□□ -0.83
CCDC178-203ENST00000399177 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
CCDC178-203ENST00000399177 TSEN34Q9BSV6 310 aaKnown RBP9.84□□□□□ -0.83
CCDC178-203ENST00000399177 NXF1Q9UBU9 619 aaKnown RBP9.84□□□□□ -0.83
CCDC178-203ENST00000399177 ZNF592Q92610 1267 aa9.83□□□□□ -0.84
CCDC178-203ENST00000399177 PRM3Q9NNZ6 103 aa9.83□□□□□ -0.84
CCDC178-203ENST00000399177 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
CCDC178-203ENST00000399177 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
CCDC178-203ENST00000399177 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
CCDC178-203ENST00000399177 RAB15P59190 212 aa9.81□□□□□ -0.84
CCDC178-203ENST00000399177 FBXO31Q5XUX0 539 aaPredicted RBP9.81□□□□□ -0.84
CCDC178-203ENST00000399177 KLF16Q9BXK1 252 aaPredicted RBP9.81□□□□□ -0.84
CCDC178-203ENST00000399177 HMX1Q9NP08 348 aaPredicted RBP9.81□□□□□ -0.84
CCDC178-203ENST00000399177 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
CCDC178-203ENST00000399177 NPAS3Q8IXF0 933 aa9.79□□□□□ -0.84
CCDC178-203ENST00000399177 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
CCDC178-203ENST00000399177 IRF7Q92985 503 aa9.79□□□□□ -0.84
CCDC178-203ENST00000399177 ESF1Q9H501 851 aaKnown RBP9.79□□□□□ -0.84
CCDC178-203ENST00000399177 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
CCDC178-203ENST00000399177 ZBBXA8MT70 800 aa9.77□□□□□ -0.85
CCDC178-203ENST00000399177 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
CCDC178-203ENST00000399177 PCDHB9Q9Y5E1 797 aa9.77□□□□□ -0.85
CCDC178-203ENST00000399177 INTS6LQ5JSJ4 861 aaKnown RBP9.75□□□□□ -0.85
CCDC178-203ENST00000399177 NDUFB9Q9Y6M9 179 aa9.75□□□□□ -0.85
CCDC178-203ENST00000399177 TTLL8A6PVC2 850 aa9.74□□□□□ -0.85
CCDC178-203ENST00000399177 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.74□□□□□ -0.85
CCDC178-203ENST00000399177 MCCD1P59942 119 aaPredicted RBP9.73□□□□□ -0.85
CCDC178-203ENST00000399177 RNF20Q5VTR2 975 aa9.73□□□□□ -0.85
CCDC178-203ENST00000399177 CCDC125Q86Z20 511 aa9.73□□□□□ -0.85
CCDC178-203ENST00000399177 SEPT12Q8IYM1 358 aa9.73□□□□□ -0.85
CCDC178-203ENST00000399177 SOBPA7XYQ1 873 aa9.72□□□□□ -0.85
CCDC178-203ENST00000399177 VEGFBP49765 207 aa9.72□□□□□ -0.85
CCDC178-203ENST00000399177 RELBQ01201 579 aa9.72□□□□□ -0.85
CCDC178-203ENST00000399177 CBLBQ13191 982 aa9.72□□□□□ -0.85
CCDC178-203ENST00000399177 TRIM34Q9BYJ4 488 aa9.72□□□□□ -0.85
CCDC178-203ENST00000399177 FAM181BA6NEQ2 426 aa9.71□□□□□ -0.86
CCDC178-203ENST00000399177 POLMQ9NP87 494 aaPredicted RBP9.71□□□□□ -0.86
CCDC178-203ENST00000399177 Q6ZVU0 165 aa9.7□□□□□ -0.86
CCDC178-203ENST00000399177 H3BM21 787 aa9.69□□□□□ -0.86
CCDC178-203ENST00000399177 ERVH48-1M5A8F1 160 aa9.69□□□□□ -0.86
CCDC178-203ENST00000399177 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
CCDC178-203ENST00000399177 NR1H3Q13133 447 aa9.69□□□□□ -0.86
CCDC178-203ENST00000399177 OCSTAMPQ9BR26 566 aa9.69□□□□□ -0.86
CCDC178-203ENST00000399177 FIGNL2A6NMB9 653 aa9.68□□□□□ -0.86
CCDC178-203ENST00000399177 SOCS7O14512 581 aa9.68□□□□□ -0.86
CCDC178-203ENST00000399177 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
CCDC178-203ENST00000399177 ZNF784Q8NCA9 323 aaPredicted RBP9.68□□□□□ -0.86
CCDC178-203ENST00000399177 SPINT1O43278 529 aa9.67□□□□□ -0.86
CCDC178-203ENST00000399177 GJD4Q96KN9 370 aaPredicted RBP9.67□□□□□ -0.86
CCDC178-203ENST00000399177 AGBL1Q96MI9 1066 aa9.67□□□□□ -0.86
CCDC178-203ENST00000399177 TMPRSS4Q9NRS4 437 aa9.67□□□□□ -0.86
CCDC178-203ENST00000399177 ZNF395Q9H8N7 513 aaPredicted RBP9.66□□□□□ -0.86
CCDC178-203ENST00000399177 CYLDQ9NQC7 956 aa9.66□□□□□ -0.86
CCDC178-203ENST00000399177 DNMT3LQ9UJW3 386 aa9.66□□□□□ -0.86
CCDC178-203ENST00000399177 ADH1AP07327 375 aa9.65□□□□□ -0.86
CCDC178-203ENST00000399177 ESPNB1AK53 854 aa9.64□□□□□ -0.87
CCDC178-203ENST00000399177 GIGYF1O75420 1035 aaPredicted RBP9.64□□□□□ -0.87
CCDC178-203ENST00000399177 MTMR14Q8NCE2 650 aa9.64□□□□□ -0.87
CCDC178-203ENST00000399177 INSM2Q96T92 566 aaPredicted RBP9.64□□□□□ -0.87
CCDC178-203ENST00000399177 GMPRP36959 345 aa9.63□□□□□ -0.87
CCDC178-203ENST00000399177 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC178-203ENST00000399177 SNRKQ9NRH2 765 aa9.63□□□□□ -0.87
CCDC178-203ENST00000399177 ATP5J2-PTCD1G3V325 749 aa9.62□□□□□ -0.87
CCDC178-203ENST00000399177 PTGIRP43119 386 aa9.62□□□□□ -0.87
CCDC178-203ENST00000399177 PPFIA3O75145 1194 aa9.61□□□□□ -0.87
CCDC178-203ENST00000399177 PTSQ03393 145 aa9.61□□□□□ -0.87
CCDC178-203ENST00000399177 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
CCDC178-203ENST00000399177 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
CCDC178-203ENST00000399177 MYCP01106 439 aaPredicted RBP9.6□□□□□ -0.87
CCDC178-203ENST00000399177 CTSOP43234 321 aaPredicted RBP9.6□□□□□ -0.87
CCDC178-203ENST00000399177 CC2D2BQ6DHV5 1058 aa9.6□□□□□ -0.87
CCDC178-203ENST00000399177 WWC1Q8IX03 1113 aa9.6□□□□□ -0.87
CCDC178-203ENST00000399177 MEN1O00255 615 aa9.59□□□□□ -0.87
CCDC178-203ENST00000399177 SUZ12Q15022 739 aaKnown RBP9.59□□□□□ -0.87
CCDC178-203ENST00000399177 CYP2U1Q7Z449 544 aa9.59□□□□□ -0.87
CCDC178-203ENST00000399177 ZSCAN1Q8NBB4 408 aa9.59□□□□□ -0.87
CCDC178-203ENST00000399177 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
CCDC178-203ENST00000399177 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
CCDC178-203ENST00000399177 ERBB4Q15303 1308 aa9.57□□□□□ -0.88
CCDC178-203ENST00000399177 CDC14CA4D256 554 aa9.57□□□□□ -0.88
CCDC178-203ENST00000399177 LILRA1O75019 489 aa9.57□□□□□ -0.88
CCDC178-203ENST00000399177 GTF2E1P29083 439 aaPredicted RBP9.57□□□□□ -0.88
CCDC178-203ENST00000399177 SLC27A3Q5K4L6 730 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms