RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
CYCSP55-201ENST00000399027 POTEAQ6S8J7 498 aa14.33□□□□□ -0.12
CYCSP55-201ENST00000399027 TRPC5Q9UL62 973 aaPredicted RBP14.33□□□□□ -0.12
CYCSP55-201ENST00000399027 SOX12O15370 315 aa14.32□□□□□ -0.12
CYCSP55-201ENST00000399027 PIAS4Q8N2W9 510 aaPredicted RBP14.32□□□□□ -0.12
CYCSP55-201ENST00000399027 RTL1A6NKG5 1358 aa14.32□□□□□ -0.12
CYCSP55-201ENST00000399027 KIF24Q5T7B8 1368 aa14.32□□□□□ -0.12
CYCSP55-201ENST00000399027 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
CYCSP55-201ENST00000399027 BLMP54132 1417 aaPredicted RBP14.32□□□□□ -0.12
CYCSP55-201ENST00000399027 CDK12Q9NYV4 1490 aaPredicted RBP14.31□□□□□ -0.12
CYCSP55-201ENST00000399027 VPS72Q15906 364 aa14.31□□□□□ -0.12
CYCSP55-201ENST00000399027 QTRT2Q9H974 415 aaKnown RBP14.31□□□□□ -0.12
CYCSP55-201ENST00000399027 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
CYCSP55-201ENST00000399027 MAP3K19Q56UN5 1328 aa14.3□□□□□ -0.12
CYCSP55-201ENST00000399027 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
CYCSP55-201ENST00000399027 THSD7AQ9UPZ6 1657 aa14.3□□□□□ -0.12
CYCSP55-201ENST00000399027 BRWD3Q6RI45 1802 aa14.29□□□□□ -0.12
CYCSP55-201ENST00000399027 FBLN1P23142 703 aa14.29□□□□□ -0.12
CYCSP55-201ENST00000399027 RBM6P78332 1123 aaKnown RBP14.28□□□□□ -0.12
CYCSP55-201ENST00000399027 CRB1P82279 1406 aa14.28□□□□□ -0.12
CYCSP55-201ENST00000399027 IP6K1Q92551 441 aa14.28□□□□□ -0.12
CYCSP55-201ENST00000399027 GJD4Q96KN9 370 aaPredicted RBP14.28□□□□□ -0.12
CYCSP55-201ENST00000399027 PARP4Q9UKK3 1724 aaKnown RBP14.27□□□□□ -0.12
CYCSP55-201ENST00000399027 FLT4P35916 1363 aa14.27□□□□□ -0.12
CYCSP55-201ENST00000399027 SPATA31A5Q5VU36 1347 aa14.27□□□□□ -0.12
CYCSP55-201ENST00000399027 SPATA31A7Q8IWB4 1347 aa14.27□□□□□ -0.12
CYCSP55-201ENST00000399027 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.13
CYCSP55-201ENST00000399027 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
CYCSP55-201ENST00000399027 RXRBP28702 533 aa14.27□□□□□ -0.13
CYCSP55-201ENST00000399027 HOXC9P31274 260 aa14.27□□□□□ -0.13
CYCSP55-201ENST00000399027 RRS1Q15050 365 aaKnown RBP14.27□□□□□ -0.13
CYCSP55-201ENST00000399027 ERBB3P21860 1342 aa14.26□□□□□ -0.13
CYCSP55-201ENST00000399027 WDR17Q8IZU2 1322 aa14.26□□□□□ -0.13
CYCSP55-201ENST00000399027 MORC1Q86VD1 984 aa14.26□□□□□ -0.13
CYCSP55-201ENST00000399027 RGS12O14924 1447 aa14.25□□□□□ -0.13
CYCSP55-201ENST00000399027 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
CYCSP55-201ENST00000399027 EVA1CP58658 441 aa14.25□□□□□ -0.13
CYCSP55-201ENST00000399027 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
CYCSP55-201ENST00000399027 STRN4Q9NRL3 753 aa14.25□□□□□ -0.13
CYCSP55-201ENST00000399027 POLKQ9UBT6 870 aa14.25□□□□□ -0.13
CYCSP55-201ENST00000399027 INSRP06213 1382 aa14.24□□□□□ -0.13
CYCSP55-201ENST00000399027 ONECUT3O60422 494 aaPredicted RBP14.24□□□□□ -0.13
CYCSP55-201ENST00000399027 AMPHP49418 695 aa14.24□□□□□ -0.13
CYCSP55-201ENST00000399027 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
CYCSP55-201ENST00000399027 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
CYCSP55-201ENST00000399027 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
CYCSP55-201ENST00000399027 EMILIN1Q9Y6C2 1016 aa14.24□□□□□ -0.13
CYCSP55-201ENST00000399027 RGPD1P0DJD0 1748 aa14.23□□□□□ -0.13
CYCSP55-201ENST00000399027 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
CYCSP55-201ENST00000399027 TNNT2P45379 298 aaPredicted RBP14.22□□□□□ -0.13
CYCSP55-201ENST00000399027 ILDR2Q71H61 639 aa14.22□□□□□ -0.13
CYCSP55-201ENST00000399027 ANKRD24Q8TF21 1146 aa14.22□□□□□ -0.13
CYCSP55-201ENST00000399027 THRAP3Q9Y2W1 955 aaKnown RBP14.22□□□□□ -0.13
CYCSP55-201ENST00000399027 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
CYCSP55-201ENST00000399027 BARGINQ6ZT62 677 aa14.21□□□□□ -0.13
CYCSP55-201ENST00000399027 CARD10Q9BWT7 1032 aa14.21□□□□□ -0.13
CYCSP55-201ENST00000399027 PARD3Q8TEW0 1356 aa14.21□□□□□ -0.14
CYCSP55-201ENST00000399027 HSP90AB2PQ58FF8 381 aa14.2□□□□□ -0.14
CYCSP55-201ENST00000399027 TOM1L2Q6ZVM7 507 aa14.2□□□□□ -0.14
CYCSP55-201ENST00000399027 TCP11L2Q8N4U5 519 aa14.2□□□□□ -0.14
CYCSP55-201ENST00000399027 DISP2A7MBM2 1401 aa14.2□□□□□ -0.14
CYCSP55-201ENST00000399027 NCAPD2Q15021 1401 aa14.2□□□□□ -0.14
CYCSP55-201ENST00000399027 SHANK3Q9BYB0 1731 aa14.19□□□□□ -0.14
CYCSP55-201ENST00000399027 CSB-PGBD3P0DP91 1061 aa14.19□□□□□ -0.14
CYCSP55-201ENST00000399027 FAM98CQ17RN3 349 aaKnown RBP14.18□□□□□ -0.14
CYCSP55-201ENST00000399027 COL3A1P02461 1466 aaPredicted RBP14.18□□□□□ -0.14
CYCSP55-201ENST00000399027 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
CYCSP55-201ENST00000399027 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
CYCSP55-201ENST00000399027 PKD1L3Q7Z443 1732 aa14.17□□□□□ -0.14
CYCSP55-201ENST00000399027 MTHFSP49914 203 aa14.16□□□□□ -0.14
CYCSP55-201ENST00000399027 SEPT12Q8IYM1 358 aa14.16□□□□□ -0.14
CYCSP55-201ENST00000399027 LTV1Q96GA3 475 aaPredicted RBP14.16□□□□□ -0.14
CYCSP55-201ENST00000399027 NBPF6Q5VWK0 638 aa14.15□□□□□ -0.14
CYCSP55-201ENST00000399027 NBPF4Q96M43 638 aa14.15□□□□□ -0.14
CYCSP55-201ENST00000399027 CDCA7Q9BWT1 371 aaPredicted RBP14.15□□□□□ -0.14
CYCSP55-201ENST00000399027 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
CYCSP55-201ENST00000399027 SBF2Q86WG5 1849 aa14.15□□□□□ -0.14
CYCSP55-201ENST00000399027 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
CYCSP55-201ENST00000399027 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
CYCSP55-201ENST00000399027 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
CYCSP55-201ENST00000399027 RALBP1Q15311 655 aa14.14□□□□□ -0.15
CYCSP55-201ENST00000399027 TNS2Q63HR2 1409 aa14.13□□□□□ -0.15
CYCSP55-201ENST00000399027 IGSF1Q8N6C5 1336 aa14.13□□□□□ -0.15
CYCSP55-201ENST00000399027 MEGF6O75095 1541 aa14.12□□□□□ -0.15
CYCSP55-201ENST00000399027 IL2RBP14784 551 aa14.12□□□□□ -0.15
CYCSP55-201ENST00000399027 EYA1Q99502 592 aa14.12□□□□□ -0.15
CYCSP55-201ENST00000399027 PLEKHG2Q9H7P9 1386 aa14.11□□□□□ -0.15
CYCSP55-201ENST00000399027 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
CYCSP55-201ENST00000399027 IL13P35225 146 aa14.11□□□□□ -0.15
CYCSP55-201ENST00000399027 A0A0G2JS52 829 aa14.1□□□□□ -0.15
CYCSP55-201ENST00000399027 MYT1Q01538 1121 aa14.1□□□□□ -0.15
CYCSP55-201ENST00000399027 KRT27Q7Z3Y8 459 aa14.1□□□□□ -0.15
CYCSP55-201ENST00000399027 PRKRIP1Q9H875 184 aaPredicted RBP14.1□□□□□ -0.15
CYCSP55-201ENST00000399027 TNS1Q9HBL0 1735 aaKnown RBP14.1□□□□□ -0.15
CYCSP55-201ENST00000399027 KDRP35968 1356 aa14.09□□□□□ -0.15
CYCSP55-201ENST00000399027 VIRMAQ69YN4 1812 aaKnown RBP14.09□□□□□ -0.15
CYCSP55-201ENST00000399027 DDB1Q16531 1140 aa14.09□□□□□ -0.15
CYCSP55-201ENST00000399027 USHBP1Q8N6Y0 703 aa14.09□□□□□ -0.15
CYCSP55-201ENST00000399027 MYBBP1AQ9BQG0 1328 aaKnown RBP14.09□□□□□ -0.15
CYCSP55-201ENST00000399027 DIAPH1O60610 1272 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms