RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 HMX1Q9NP08 348 aaPredicted RBP5.3□□□□□ -1.56
RPS4XP3-201ENST00000398541 TRAK2O60296 914 aa5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 TIMP2P16035 220 aa5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 TMEM259Q4ZIN3 620 aa5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 VASH1Q7L8A9 365 aaPredicted RBP5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 TRIM46Q7Z4K8 759 aa5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 TRMT44Q8IYL2 757 aaKnown RBP5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 EPS8L1Q8TE68 723 aa5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 KIFC2Q96AC6 838 aa5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 ARHGAP9Q9BRR9 750 aa5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 KLF16Q9BXK1 252 aaPredicted RBP5.29□□□□□ -1.56
RPS4XP3-201ENST00000398541 ZC3H4Q9UPT8 1303 aaKnown RBP5.28□□□□□ -1.56
RPS4XP3-201ENST00000398541 NR3C2P08235 984 aa5.28□□□□□ -1.56
RPS4XP3-201ENST00000398541 ERFEQ4G0M1 354 aa5.28□□□□□ -1.56
RPS4XP3-201ENST00000398541 RGS22Q8NE09 1264 aa5.28□□□□□ -1.56
RPS4XP3-201ENST00000398541 MAP4K5Q9Y4K4 846 aa5.28□□□□□ -1.56
RPS4XP3-201ENST00000398541 ZIC2O95409 532 aaPredicted RBP5.27□□□□□ -1.57
RPS4XP3-201ENST00000398541 FSHRP23945 695 aa5.27□□□□□ -1.57
RPS4XP3-201ENST00000398541 PTK2Q05397 1052 aa5.27□□□□□ -1.57
RPS4XP3-201ENST00000398541 ZBTB33Q86T24 672 aa5.27□□□□□ -1.57
RPS4XP3-201ENST00000398541 PNMA1Q8ND90 353 aa5.27□□□□□ -1.57
RPS4XP3-201ENST00000398541 ITPKCQ96DU7 683 aa5.27□□□□□ -1.57
RPS4XP3-201ENST00000398541 ZFAND3Q9H8U3 227 aa5.27□□□□□ -1.57
RPS4XP3-201ENST00000398541 IGSF3O75054 1194 aa5.26□□□□□ -1.57
RPS4XP3-201ENST00000398541 MRPL14Q6P1L8 145 aaKnown RBP5.26□□□□□ -1.57
RPS4XP3-201ENST00000398541 SLC10A4Q96EP9 437 aa5.26□□□□□ -1.57
RPS4XP3-201ENST00000398541 ZFP42Q96MM3 310 aa5.26□□□□□ -1.57
RPS4XP3-201ENST00000398541 OCSTAMPQ9BR26 566 aa5.26□□□□□ -1.57
RPS4XP3-201ENST00000398541 GPSM3Q9Y4H4 160 aa5.26□□□□□ -1.57
RPS4XP3-201ENST00000398541 SCARF1Q14162 830 aa5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 TMCO4Q5TGY1 634 aa5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 TREML4Q6UXN2 200 aa5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 ADAM32Q8TC27 787 aa5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 CLUAP1Q96AJ1 413 aa5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 PURBQ96QR8 312 aaKnown RBP5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 TRIM34Q9BYJ4 488 aa5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 SHROOM4Q9ULL8 1493 aa5.25□□□□□ -1.57
RPS4XP3-201ENST00000398541 AEBP1Q8IUX7 1158 aa5.24□□□□□ -1.57
RPS4XP3-201ENST00000398541 CCDC116Q8IYX3 515 aa5.24□□□□□ -1.57
RPS4XP3-201ENST00000398541 KCTD15Q96SI1 283 aaPredicted RBP5.24□□□□□ -1.57
RPS4XP3-201ENST00000398541 CDV3Q9UKY7 258 aaKnown RBP5.24□□□□□ -1.57
RPS4XP3-201ENST00000398541 MTMR7Q9Y216 660 aa5.24□□□□□ -1.57
RPS4XP3-201ENST00000398541 EMILIN1Q9Y6C2 1016 aa5.24□□□□□ -1.57
RPS4XP3-201ENST00000398541 WFS1O76024 890 aa5.23□□□□□ -1.57
RPS4XP3-201ENST00000398541 PPP1R26Q5T8A7 1209 aaPredicted RBP5.23□□□□□ -1.57
RPS4XP3-201ENST00000398541 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
RPS4XP3-201ENST00000398541 MEIOBQ8N635 442 aa5.23□□□□□ -1.57
RPS4XP3-201ENST00000398541 UPP2O95045 317 aa5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 MFAP1P55081 439 aaKnown RBP5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 NFX1Q12986 1120 aaKnown RBP5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 C6orf118Q5T5N4 469 aa5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 DZIP3Q86Y13 1208 aaKnown RBP5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 BANK1Q8NDB2 785 aa5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 GJD4Q96KN9 370 aaPredicted RBP5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 PGPEP1Q9NXJ5 209 aa5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 SERPINA10Q9UK55 444 aa5.22□□□□□ -1.57
RPS4XP3-201ENST00000398541 TERTO14746 1132 aaKnown RBP5.21□□□□□ -1.58
RPS4XP3-201ENST00000398541 BMP2P12643 396 aa5.21□□□□□ -1.58
RPS4XP3-201ENST00000398541 DHX9Q08211 1270 aaKnown RBP5.21□□□□□ -1.58
RPS4XP3-201ENST00000398541 NBPF20Q3BBV1 942 aa5.21□□□□□ -1.58
RPS4XP3-201ENST00000398541 INTS6LQ5JSJ4 861 aaKnown RBP5.21□□□□□ -1.58
RPS4XP3-201ENST00000398541 LINC00528Q8N1L1 170 aa5.21□□□□□ -1.58
RPS4XP3-201ENST00000398541 CCDC97Q96F63 343 aaPredicted RBP5.21□□□□□ -1.58
RPS4XP3-201ENST00000398541 ZBBXA8MT70 800 aa5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 RAB15P59190 212 aa5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 MCM6Q14566 821 aa5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 PROSER2Q86WR7 435 aaPredicted RBP5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 MTMR14Q8NCE2 650 aa5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 TSEN34Q9BSV6 310 aaKnown RBP5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 SNRKQ9NRH2 765 aa5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 NXF1Q9UBU9 619 aaKnown RBP5.2□□□□□ -1.58
RPS4XP3-201ENST00000398541 SOBPA7XYQ1 873 aa5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 MAN1A2O60476 641 aa5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 HMGB1P09429 215 aaKnown RBP5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 FBXO45P0C2W1 286 aa5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 RBM25P49756 843 aaKnown RBP5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 CBLBQ13191 982 aa5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 FOXD4L5Q5VV16 416 aaPredicted RBP5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 RETREG2Q8NC44 543 aa5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 FOXD4L4Q8WXT5 416 aaPredicted RBP5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 GZF1Q9H116 711 aaPredicted RBP5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 TTBK1Q5TCY1 1321 aaPredicted RBP5.19□□□□□ -1.58
RPS4XP3-201ENST00000398541 SOCS7O14512 581 aa5.18□□□□□ -1.58
RPS4XP3-201ENST00000398541 VEGFBP49765 207 aa5.18□□□□□ -1.58
RPS4XP3-201ENST00000398541 Q6ZVU0 165 aa5.18□□□□□ -1.58
RPS4XP3-201ENST00000398541 SLC16A10Q8TF71 515 aa5.18□□□□□ -1.58
RPS4XP3-201ENST00000398541 PCDHB9Q9Y5E1 797 aa5.18□□□□□ -1.58
RPS4XP3-201ENST00000398541 ESPNB1AK53 854 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 ERVH48-1M5A8F1 160 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 GPR37L1O60883 481 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 NPAS3Q8IXF0 933 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 SEPT12Q8IYM1 358 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 TMPRSS4Q9NRS4 437 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 ZNF777Q9ULD5 760 aaPredicted RBP5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 NDUFB9Q9Y6M9 179 aa5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 SOS2Q07890 1332 aaPredicted RBP5.17□□□□□ -1.58
RPS4XP3-201ENST00000398541 GIGYF1O75420 1035 aaPredicted RBP5.16□□□□□ -1.58
RPS4XP3-201ENST00000398541 RELBQ01201 579 aa5.16□□□□□ -1.58
RPS4XP3-201ENST00000398541 NR1H3Q13133 447 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms