RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 CDK12Q9NYV4 1490 aaPredicted RBP15.39■□□□□ 0.05
PPME1-202ENST00000398427 PPM1GO15355 546 aaPredicted RBP15.39■□□□□ 0.05
PPME1-202ENST00000398427 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
PPME1-202ENST00000398427 RGPD5Q99666 1765 aa15.38■□□□□ 0.05
PPME1-202ENST00000398427 LMO7Q8WWI1 1683 aa15.38■□□□□ 0.05
PPME1-202ENST00000398427 CCDC184Q52MB2 194 aa15.37■□□□□ 0.05
PPME1-202ENST00000398427 FLT4P35916 1363 aa15.37■□□□□ 0.05
PPME1-202ENST00000398427 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
PPME1-202ENST00000398427 RTL1A6NKG5 1358 aa15.37■□□□□ 0.05
PPME1-202ENST00000398427 KIF24Q5T7B8 1368 aa15.37■□□□□ 0.05
PPME1-202ENST00000398427 CHRNA2Q15822 529 aa15.37■□□□□ 0.05
PPME1-202ENST00000398427 ABCC6O95255 1503 aa15.36■□□□□ 0.05
PPME1-202ENST00000398427 ADAMTS2O95450 1211 aa15.36■□□□□ 0.05
PPME1-202ENST00000398427 HOXC9P31274 260 aa15.36■□□□□ 0.05
PPME1-202ENST00000398427 AMPHP49418 695 aa15.36■□□□□ 0.05
PPME1-202ENST00000398427 PRDM11Q9NQV5 511 aa15.36■□□□□ 0.05
PPME1-202ENST00000398427 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
PPME1-202ENST00000398427 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
PPME1-202ENST00000398427 IP6K1Q92551 441 aa15.35■□□□□ 0.05
PPME1-202ENST00000398427 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
PPME1-202ENST00000398427 AXIN2Q9Y2T1 843 aa15.35■□□□□ 0.05
PPME1-202ENST00000398427 PLCH1Q4KWH8 1693 aa15.34■□□□□ 0.05
PPME1-202ENST00000398427 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
PPME1-202ENST00000398427 INSRP06213 1382 aa15.34■□□□□ 0.05
PPME1-202ENST00000398427 CAMTA1Q9Y6Y1 1673 aa15.34■□□□□ 0.05
PPME1-202ENST00000398427 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
PPME1-202ENST00000398427 CCER2I3L3R5 266 aa15.32■□□□□ 0.04
PPME1-202ENST00000398427 CFAP53Q96M91 514 aa15.32■□□□□ 0.04
PPME1-202ENST00000398427 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
PPME1-202ENST00000398427 COL5A2P05997 1499 aaPredicted RBP15.31■□□□□ 0.04
PPME1-202ENST00000398427 NRAPQ86VF7 1730 aa15.3■□□□□ 0.04
PPME1-202ENST00000398427 EIF4A2Q14240 407 aaKnown RBP15.3■□□□□ 0.04
PPME1-202ENST00000398427 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
PPME1-202ENST00000398427 SLIT2O94813 1529 aa15.3■□□□□ 0.04
PPME1-202ENST00000398427 RGPD2P0DJD1 1756 aa15.3■□□□□ 0.04
PPME1-202ENST00000398427 ERBB3P21860 1342 aa15.29■□□□□ 0.04
PPME1-202ENST00000398427 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
PPME1-202ENST00000398427 DIAPH1O60610 1272 aaKnown RBP15.29■□□□□ 0.04
PPME1-202ENST00000398427 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
PPME1-202ENST00000398427 LTV1Q96GA3 475 aaPredicted RBP15.29■□□□□ 0.04
PPME1-202ENST00000398427 C8orf37Q96NL8 207 aa15.29■□□□□ 0.04
PPME1-202ENST00000398427 BTG4Q9NY30 223 aa15.29■□□□□ 0.04
PPME1-202ENST00000398427 IL13P35225 146 aa15.28■□□□□ 0.04
PPME1-202ENST00000398427 ANKRD24Q8TF21 1146 aa15.28■□□□□ 0.04
PPME1-202ENST00000398427 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
PPME1-202ENST00000398427 MEX3CQ5U5Q3 659 aaKnown RBP15.27■□□□□ 0.04
PPME1-202ENST00000398427 NGLY1Q96IV0 654 aa15.26■□□□□ 0.03
PPME1-202ENST00000398427 FNBP4Q8N3X1 1017 aaPredicted RBP15.25■□□□□ 0.03
PPME1-202ENST00000398427 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
PPME1-202ENST00000398427 BCL9LQ86UU0 1499 aa15.25■□□□□ 0.03
PPME1-202ENST00000398427 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
PPME1-202ENST00000398427 WDR17Q8IZU2 1322 aa15.25■□□□□ 0.03
PPME1-202ENST00000398427 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.25■□□□□ 0.03
PPME1-202ENST00000398427 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
PPME1-202ENST00000398427 U2SURPO15042 1029 aaKnown RBP15.24■□□□□ 0.03
PPME1-202ENST00000398427 NBPF6Q5VWK0 638 aa15.24■□□□□ 0.03
PPME1-202ENST00000398427 NBPF4Q96M43 638 aa15.24■□□□□ 0.03
PPME1-202ENST00000398427 EYA1Q99502 592 aa15.24■□□□□ 0.03
PPME1-202ENST00000398427 IGSF1Q8N6C5 1336 aa15.23■□□□□ 0.03
PPME1-202ENST00000398427 CSB-PGBD3P0DP91 1061 aa15.23■□□□□ 0.03
PPME1-202ENST00000398427 LARP1Q6PKG0 1096 aaKnown RBP15.23■□□□□ 0.03
PPME1-202ENST00000398427 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
PPME1-202ENST00000398427 AFF2P51816 1311 aa15.23■□□□□ 0.03
PPME1-202ENST00000398427 EVA1CP58658 441 aa15.23■□□□□ 0.03
PPME1-202ENST00000398427 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
PPME1-202ENST00000398427 WDR43Q15061 677 aaKnown RBP eCLIP15.22■□□□□ 0.03
PPME1-202ENST00000398427 UNC5CLQ8IV45 518 aa15.22■□□□□ 0.03
PPME1-202ENST00000398427 USHBP1Q8N6Y0 703 aa15.22■□□□□ 0.03
PPME1-202ENST00000398427 CRB1P82279 1406 aa15.22■□□□□ 0.03
PPME1-202ENST00000398427 MSH5O43196 834 aa15.21■□□□□ 0.03
PPME1-202ENST00000398427 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.03
PPME1-202ENST00000398427 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
PPME1-202ENST00000398427 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
PPME1-202ENST00000398427 NLRP2Q9NX02 1062 aa15.21■□□□□ 0.03
PPME1-202ENST00000398427 USP21Q9UK80 565 aa15.21■□□□□ 0.03
PPME1-202ENST00000398427 AEBP1Q8IUX7 1158 aa15.21■□□□□ 0.02
PPME1-202ENST00000398427 FAM9BQ8IZU0 186 aa15.21■□□□□ 0.02
PPME1-202ENST00000398427 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.02
PPME1-202ENST00000398427 HMOX1P09601 288 aa15.2■□□□□ 0.02
PPME1-202ENST00000398427 KDRP35968 1356 aa15.2■□□□□ 0.02
PPME1-202ENST00000398427 SULT6B1Q6IMI4 303 aa15.2■□□□□ 0.02
PPME1-202ENST00000398427 CARD10Q9BWT7 1032 aa15.18■□□□□ 0.02
PPME1-202ENST00000398427 RSPH6AQ9H0K4 717 aa15.18■□□□□ 0.02
PPME1-202ENST00000398427 USP35Q9P2H5 1018 aa15.18■□□□□ 0.02
PPME1-202ENST00000398427 WNK3Q9BYP7 1800 aa15.17■□□□□ 0.02
PPME1-202ENST00000398427 VPS72Q15906 364 aa15.17■□□□□ 0.02
PPME1-202ENST00000398427 SPATA31A1Q5TZJ5 1347 aa15.17■□□□□ 0.02
PPME1-202ENST00000398427 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
PPME1-202ENST00000398427 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
PPME1-202ENST00000398427 ATRNO75882 1429 aa15.16■□□□□ 0.02
PPME1-202ENST00000398427 MEGF6O75095 1541 aa15.16■□□□□ 0.02
PPME1-202ENST00000398427 FCHSD2O94868 740 aa15.16■□□□□ 0.02
PPME1-202ENST00000398427 PRKAR2BP31323 418 aa15.16■□□□□ 0.02
PPME1-202ENST00000398427 GLI3P10071 1580 aa15.15■□□□□ 0.02
PPME1-202ENST00000398427 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
PPME1-202ENST00000398427 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
PPME1-202ENST00000398427 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
PPME1-202ENST00000398427 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
PPME1-202ENST00000398427 UBE2Q2Q8WVN8 375 aa15.14■□□□□ 0.01
PPME1-202ENST00000398427 DISP2A7MBM2 1401 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms